FFCP PHASE1:Hg19::chr3:112358008..112358018,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:112358008..112358018,- to FFCP PHASE1:Hg19::chr3:112358008..112358018,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=492bp_to_BC023639,BC042128_5end | |||
|cluster_id=chr3:112358008..112358018,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_25_at_CCDC80_5end | |||
|id=chr3:112358008..112358018,- | |||
|ontology_enrichment_celltype=CL:0000055!9.37e-21!180;CL:0000057!2.82e-17!75;CL:0002620!2.80e-10!23;CL:0002334!3.55e-10!12;CL:0000136!5.98e-09!15;CL:0000680!1.77e-08!57;CL:0000056!1.77e-08!57;CL:0000355!1.77e-08!57;CL:0000187!4.87e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.77e-17;23!CL:0002334;5.54e-11;12!CL:0000136;2.55e-10;13!CL:1000306;2.76e-09;4!CL:0002547;2.76e-09;4!CL:0002579;2.60e-08;3!CL:0002615;4.91e-08;3!CL:0002580;1.54e-07;3!CL:0000515;4.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.05e-18,76;CL:0002620,6.13e-17,23;CL:0000136,4.40e-11,15;CL:0002334,4.91e-11,12;CL:1000306,2.45e-09,4;CL:0002547,2.45e-09,4;CL:0000048,7.59e-09,427;CL:0000723,1.73e-08,433;CL:0002579,2.53e-08,3;CL:0000034,4.96e-08,441;CL:0002615,6.80e-08,3;CL:0002580,1.02e-07,3;CL:0000134,4.32e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.76e-12;5!DOID:450;2.76e-12;5!DOID:66;2.76e-12;5!DOID:423;2.76e-12;5!DOID:0080000;2.76e-12;5!DOID:11722;2.76e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.52e-12,5;DOID:450,2.52e-12,5;DOID:66,2.52e-12,5;DOID:423,2.52e-12,5;DOID:0080000,2.52e-12,5;DOID:11722,2.52e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!6.38e-08!61;UBERON:0002036!6.38e-08!61;UBERON:0003082!6.38e-08!61;UBERON:0002385!7.30e-08!63;UBERON:0001015!7.30e-08!63;UBERON:0000383!7.30e-08!63;UBERON:0001013!8.07e-08!14;UBERON:0000914!1.98e-07!83;UBERON:0002329!1.98e-07!83;UBERON:0003077!1.98e-07!83;UBERON:0003059!1.98e-07!83;UBERON:0007282!1.98e-07!83;UBERON:0009618!1.98e-07!83;UBERON:0007285!1.98e-07!83;UBERON:0003688!3.40e-07!6;UBERON:0002358!3.40e-07!6;UBERON:0003684!3.40e-07!6;UBERON:0001178!3.40e-07!6;UBERON:0004290!5.15e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.23e-16;9!UBERON:0000042;2.23e-16;9!UBERON:0003688;1.14e-14;6!UBERON:0002358;1.14e-14;6!UBERON:0003684;1.14e-14;6!UBERON:0001178;1.14e-14;6!UBERON:0001013;5.49e-11;14!UBERON:0004797;2.76e-09;4!UBERON:0000415;2.76e-09;4!UBERON:0007240;2.76e-09;4!UBERON:0005742;2.76e-09;4!UBERON:0005734;2.76e-09;4!UBERON:0004664;2.76e-09;4!UBERON:0004663;2.76e-09;4!UBERON:0002199;2.89e-09;46!UBERON:0002416;2.89e-09;46!UBERON:0002097;7.48e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.55e-14,6;UBERON:0002358,1.55e-14,6;UBERON:0003684,1.55e-14,6;UBERON:0001178,1.55e-14,6;UBERON:0002199,6.47e-13,46;UBERON:0002416,6.47e-13,46;UBERON:0004457,1.09e-11,12;UBERON:0000042,1.09e-11,12;UBERON:0001013,3.49e-11,14;UBERON:0002097,1.70e-10,41;UBERON:0000415,2.45e-09,4;UBERON:0007240,2.45e-09,4;UBERON:0005742,2.45e-09,4;UBERON:0005734,2.45e-09,4;UBERON:0004664,2.45e-09,4;UBERON:0004663,2.45e-09,4;UBERON:0004797,6.01e-08,7;UBERON:0002384,1.65e-07,371 | |||
|phase1_expression=2.54349730978779,9.42042305120326,8.3163098416623,2.00146596706261,9.38618298297304,5.23403114460221,2.53299878168311,0,1.82829939739887,0,0,1.09220686065086,1.05506791291381,0,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0.612002073732759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,1.15076305659177,0.361439152384566,2.50668955317945,0.724232594804119,0,0,0.189069634328136,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,5.19185097824777,1.58891016975863,13.4813211751942,1.41867352879343,1.68203280042692,0,0,1.8672662123986,0.269421344139376,0.163461903113459,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.469737994575059,0,0,0,0,0.206651562351531,0,0,0,0,0.336672227908132,0.375355559615893,0,0.438977620880838,0.30648779579902,0,0.226864366320042,3.58779271377724,3.41691822109708,6.99375273826554,3.60109315301283,4.225153698776,2.83404594050192,2.60563598864226,5.90717162844432,2.24105111870757,2.27190396819703,2.85354685791128,2.7479829659198,9.9402685904652,3.02256294682921,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0.285826432630578,0.784917590417525,0.43596006883328,0.4400297149257,0.387815147273333,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.428933980974443,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,2.02693829334611,2.05476322550383,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,1.03985430765404,1.78428988797162,0.473107245101804,0.702848489956279,0.902838299183157,0,0,1.99267679560631,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.907170879989041,8.68377327365719,1.68808170616869,3.64858122762996,11.148105985246,3.58195074346692,11.5814823223397,1.48418066444991,1.07946785661859,0.532685175939381,0.574890092096664,0.519254429183621,0.581051892299796,0,0,0.0920809889358963,1.03333003348146,0.910455840033585,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0,0.770243085573222,0.614014698904518,0.137836572484531,0.322260734604821,0.580066775656914,0.170453254832202,0.356128142586949,0.165284915360978,0,0.127612712494584,0,2.78907329578371,10.3888074454111,0,0,1.06461206063404,0,0.55597265731176,0.429374660225974,0.372158369359667,0.316379424718726,0.38126038784765,0.511795582622668,1.28381696410176,0,0.78494864019923,0.359744915166629,2.19629623788844,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0.487426979262569,0,0.409499734223957,1.69686518344455,2.26016233240486,0,0,0.876901770507525,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,2.11107635297664,3.29294892959902,0.75894634753143,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.890894042497916,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0.398495976502139,0,0,0,0,2.79935628895627,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.692552326534174,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0.468528891450678,0,0,0,1.18375320854817,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0.261177619741208,1.57254001417827,0.343972064943233,0,0,0,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0.104602846312333,0.815985741090574,0,0,0,0,0.429765441419957,0,2.79282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,2.28611152076586,0,0,1.02232813071253,0,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0.5013797880454,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,3.03827302801392,1.66441758450784,0.947015026375446,1.25783950876288,1.77962244319307,2.28840068396924,3.17584939902802,0.310874401165561,0.295710299979268,0.159296767163702,0.449803112163605,0.155262956876259,2.48823724704513,1.59505028734797,0.521745061811734,0.901545653983311,4.95046775819434,0.406870733204662,0.363697318405119,0.214821114084977,0,1.59238355479446,0.800055529326307,2.74716564146234,0.673498977531838,0,0,0,0,1.1335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|phase1_expression=2.54349730978779,9.42042305120326,8.3163098416623,2.00146596706261,9.38618298297304,5.23403114460221,2.53299878168311,0,1.82829939739887,0,0,1.09220686065086,1.05506791291381,0,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0.612002073732759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,1.15076305659177,0.361439152384566,2.50668955317945,0.724232594804119,0,0,0.189069634328136,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,5.19185097824777,1.58891016975863,13.4813211751942,1.41867352879343,1.68203280042692,0,0,1.8672662123986,0.269421344139376,0.163461903113459,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.469737994575059,0,0,0,0,0.206651562351531,0,0,0,0,0.336672227908132,0.375355559615893,0,0.438977620880838,0.30648779579902,0,0.226864366320042,3.58779271377724,3.41691822109708,6.99375273826554,3.60109315301283,4.225153698776,2.83404594050192,2.60563598864226,5.90717162844432,2.24105111870757,2.27190396819703,2.85354685791128,2.7479829659198,9.9402685904652,3.02256294682921,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0.285826432630578,0.784917590417525,0.43596006883328,0.4400297149257,0.387815147273333,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0.428933980974443,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,2.02693829334611,2.05476322550383,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,1.03985430765404,1.78428988797162,0.473107245101804,0.702848489956279,0.902838299183157,0,0,1.99267679560631,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.907170879989041,8.68377327365719,1.68808170616869,3.64858122762996,11.148105985246,3.58195074346692,11.5814823223397,1.48418066444991,1.07946785661859,0.532685175939381,0.574890092096664,0.519254429183621,0.581051892299796,0,0,0.0920809889358963,1.03333003348146,0.910455840033585,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0,0.770243085573222,0.614014698904518,0.137836572484531,0.322260734604821,0.580066775656914,0.170453254832202,0.356128142586949,0.165284915360978,0,0.127612712494584,0,2.78907329578371,10.3888074454111,0,0,1.06461206063404,0,0.55597265731176,0.429374660225974,0.372158369359667,0.316379424718726,0.38126038784765,0.511795582622668,1.28381696410176,0,0.78494864019923,0.359744915166629,2.19629623788844,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0.487426979262569,0,0.409499734223957,1.69686518344455,2.26016233240486,0,0,0.876901770507525,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,2.11107635297664,3.29294892959902,0.75894634753143,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.890894042497916,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0.398495976502139,0,0,0,0,2.79935628895627,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.692552326534174,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0.468528891450678,0,0,0,1.18375320854817,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0.261177619741208,1.57254001417827,0.343972064943233,0,0,0,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0.104602846312333,0.815985741090574,0,0,0,0,0.429765441419957,0,2.79282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,2.28611152076586,0,0,1.02232813071253,0,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0.5013797880454,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,3.03827302801392,1.66441758450784,0.947015026375446,1.25783950876288,1.77962244319307,2.28840068396924,3.17584939902802,0.310874401165561,0.295710299979268,0.159296767163702,0.449803112163605,0.155262956876259,2.48823724704513,1.59505028734797,0.521745061811734,0.901545653983311,4.95046775819434,0.406870733204662,0.363697318405119,0.214821114084977,0,1.59238355479446,0.800055529326307,2.74716564146234,0.673498977531838,0,0,0,0,1.1335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| ||
|short_description=p25@CCDC80 | |||
}} | }} |
Latest revision as of 14:18, 19 September 2015
Short description: | p25@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 492bp_to_BC023639, BC042128_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.05e-18 | 76 |
skin fibroblast | 6.13e-17 | 23 |
fat cell | 4.40e-11 | 15 |
preadipocyte | 4.91e-11 | 12 |
fibroblast of tunica adventitia of artery | 2.45e-09 | 4 |
fibroblast of the aortic adventitia | 2.45e-09 | 4 |
multi fate stem cell | 7.59e-09 | 427 |
somatic stem cell | 1.73e-08 | 433 |
omentum preadipocyte | 2.53e-08 | 3 |
stem cell | 4.96e-08 | 441 |
adipocyte of omentum tissue | 6.80e-08 | 3 |
preadipocyte of the breast | 1.02e-07 | 3 |
mesenchymal cell | 4.32e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.55e-14 | 6 |
peritoneum | 1.55e-14 | 6 |
abdominal cavity | 1.55e-14 | 6 |
visceral peritoneum | 1.55e-14 | 6 |
integument | 6.47e-13 | 46 |
integumental system | 6.47e-13 | 46 |
cavity lining | 1.09e-11 | 12 |
serous membrane | 1.09e-11 | 12 |
adipose tissue | 3.49e-11 | 14 |
skin of body | 1.70e-10 | 41 |
artery wall | 2.45e-09 | 4 |
tunica adventitia of artery | 2.45e-09 | 4 |
adventitia | 2.45e-09 | 4 |
tunica adventitia of blood vessel | 2.45e-09 | 4 |
aorta tunica adventitia | 2.45e-09 | 4 |
aorta wall | 2.45e-09 | 4 |
blood vessel layer | 6.01e-08 | 7 |
connective tissue | 1.65e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.52e-12 | 5 |
myotonic disease | 2.52e-12 | 5 |
muscle tissue disease | 2.52e-12 | 5 |
myopathy | 2.52e-12 | 5 |
muscular disease | 2.52e-12 | 5 |
myotonic dystrophy | 2.52e-12 | 5 |