FFCP PHASE1:Hg19::chr3:142838629..142838697,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:142838629..142838697,+ to FFCP PHASE1:Hg19::chr3:142838629..142838697,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9435 | |EntrezGene=9435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1970 | |HGNC=1970 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003evm.2_5end | |||
|cluster_id=chr3:142838629..142838697,+ | |||
|description=CAGE_peak_1_at_CHST2_5end | |||
|id=chr3:142838629..142838697,+ | |||
|ontology_enrichment_celltype=CL:0000034!1.74e-07!444;CL:0000048!2.16e-07!430;CL:0000723!5.96e-07!436 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.84e-08,441;CL:0000048,4.14e-08,427;CL:0000723,1.05e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.25e-16!82;UBERON:0002616!6.71e-16!59;UBERON:0005743!1.36e-15!86;UBERON:0001049!6.56e-15!57;UBERON:0005068!6.56e-15!57;UBERON:0006241!6.56e-15!57;UBERON:0007135!6.56e-15!57;UBERON:0002020!5.29e-13!34;UBERON:0003528!5.29e-13!34;UBERON:0000955!6.93e-13!69;UBERON:0006238!6.93e-13!69;UBERON:0000073!9.15e-13!94;UBERON:0001016!9.15e-13!94;UBERON:0001893!1.23e-12!34;UBERON:0001869!3.06e-12!32;UBERON:0002791!3.30e-12!33;UBERON:0003080!4.07e-11!42;UBERON:0002780!4.34e-11!41;UBERON:0001890!4.34e-11!41;UBERON:0006240!4.34e-11!41;UBERON:0000479!1.72e-10!787;UBERON:0003075!2.88e-10!86;UBERON:0007284!2.88e-10!86;UBERON:0000956!9.58e-10!25;UBERON:0000203!9.58e-10!25;UBERON:0000033!1.62e-09!123;UBERON:0000153!1.92e-09!129;UBERON:0007811!1.92e-09!129;UBERON:0004121!4.64e-09!169;UBERON:0003056!1.03e-08!61;UBERON:0002619!1.25e-08!22;UBERON:0000486!1.85e-08!82;UBERON:0001950!2.92e-08!20;UBERON:0002346!2.93e-08!90;UBERON:0000922!3.79e-08!612;UBERON:0007023!4.23e-08!115;UBERON:0004290!9.59e-08!70;UBERON:0000924!1.00e-07!173;UBERON:0006601!1.00e-07!173;UBERON:0000914!1.51e-07!83;UBERON:0002329!1.51e-07!83;UBERON:0003077!1.51e-07!83;UBERON:0003059!1.51e-07!83;UBERON:0007282!1.51e-07!83;UBERON:0009618!1.51e-07!83;UBERON:0007285!1.51e-07!83;UBERON:0000468!4.13e-07!659;UBERON:0002050!4.30e-07!605;UBERON:0005423!4.30e-07!605;UBERON:0000480!5.01e-07!626;UBERON:0000923!7.30e-07!604;UBERON:0005291!7.30e-07!604;UBERON:0006598!7.30e-07!604;UBERON:0002532!7.30e-07!604;UBERON:0000467!8.19e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.93e-11;34!UBERON:0002020;2.93e-11;34!UBERON:0001869;3.80e-11;32!UBERON:0002791;5.03e-11;32!UBERON:0001893;5.05e-11;34!UBERON:0000956;9.80e-10;25!UBERON:0000203;9.80e-10;25!UBERON:0002619;1.37e-08;22!UBERON:0001950;3.21e-08;20!UBERON:0002780;3.52e-08;41!UBERON:0001890;3.52e-08;41!UBERON:0000073;4.22e-08;53!UBERON:0002616;4.22e-08;53!UBERON:0001017;3.50e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-16,81;UBERON:0001049,4.03e-15,56;UBERON:0005068,4.03e-15,56;UBERON:0006241,4.03e-15,56;UBERON:0007135,4.03e-15,56;UBERON:0000479,3.33e-14,773;UBERON:0000073,7.31e-14,53;UBERON:0002616,7.31e-14,53;UBERON:0001016,1.54e-13,89;UBERON:0000955,3.12e-13,68;UBERON:0006238,3.12e-13,68;UBERON:0003528,3.97e-13,34;UBERON:0002020,3.97e-13,34;UBERON:0001893,9.34e-13,34;UBERON:0003075,1.11e-12,82;UBERON:0007284,1.11e-12,82;UBERON:0000923,2.21e-12,560;UBERON:0010316,2.21e-12,560;UBERON:0005291,2.21e-12,560;UBERON:0006598,2.21e-12,560;UBERON:0010317,2.21e-12,560;UBERON:0002532,2.21e-12,560;UBERON:0001869,2.34e-12,32;UBERON:0002791,3.68e-12,32;UBERON:0002050,3.69e-12,564;UBERON:0010314,2.55e-11,132;UBERON:0002780,2.75e-11,41;UBERON:0001890,2.75e-11,41;UBERON:0003080,2.75e-11,41;UBERON:0006240,2.75e-11,41;UBERON:0010371,3.24e-11,104;UBERON:0000922,1.10e-10,592;UBERON:0002346,1.81e-10,86;UBERON:0005423,3.36e-10,581;UBERON:0000956,7.80e-10,25;UBERON:0000203,7.80e-10,25;UBERON:0004121,1.72e-09,171;UBERON:0000924,1.72e-09,171;UBERON:0006601,1.72e-09,171;UBERON:0000926,3.12e-09,315;UBERON:0004120,3.12e-09,315;UBERON:0006603,3.12e-09,315;UBERON:0003056,3.15e-09,61;UBERON:0007503,4.86e-09,78;UBERON:0000486,8.01e-09,83;UBERON:0002619,1.05e-08,22;UBERON:0007524,1.25e-08,73;UBERON:0001950,2.47e-08,20;UBERON:0003077,2.76e-08,72;UBERON:0007285,2.76e-08,72;UBERON:0002329,4.01e-08,71;UBERON:0003059,4.01e-08,71;UBERON:0007282,4.01e-08,71;UBERON:0004290,4.01e-08,71;UBERON:0009618,4.01e-08,71;UBERON:0007023,1.59e-07,114;UBERON:0000119,3.03e-07,309;UBERON:0000483,7.32e-07,306 | |||
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| ||
|short_description=p1@CHST2 | |||
}} | }} |
Latest revision as of 05:16, 25 September 2015
Short description: | p1@CHST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHST2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003evm.2_5end |
EntrezGene: | CHST2 |
HGNC: | 1970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.84e-08 | 441 |
multi fate stem cell | 4.14e-08 | 427 |
somatic stem cell | 1.05e-07 | 433 |