FFCP PHASE1:Hg19::chr3:30647997..30648010,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:30647997..30648010,+ to FFCP PHASE1:Hg19::chr3:30647997..30648010,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7048 | |EntrezGene=7048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11773 | |HGNC=11773 | ||
|TSSclassifier=strong | |||
|UniProt=P37173,D2JYI1,A3QNQ0 | |UniProt=P37173,D2JYI1,A3QNQ0 | ||
|association_with_transcript=3bp_to_ENST00000295754,NM_001024847,NM_003242,uc003cen.2,uc003ceo.2_5end | |||
|cluster_id=chr3:30647997..30648010,+ | |||
|coexpression_cluster_id=C4324 | |||
|description=CAGE_peak_4_at_TGFBR2_5end | |||
|id=chr3:30647997..30648010,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.21e-12!24;CL:0000115!1.01e-10!35;CL:0000222!3.72e-09!119;CL:0000071!3.81e-09!18;CL:0002546!3.81e-09!18;CL:0002078!3.79e-08!44;CL:0000220!3.51e-07!246;CL:0002321!5.98e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.30e-14;24!CL:0000115;2.18e-10;36!CL:0000071;3.22e-10;18!CL:0000136;1.51e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.16e-14,24;CL:0000115,2.43e-12,36;CL:0000222,5.72e-11,121;CL:0000071,3.15e-10,18;CL:0002546,3.15e-10,18;CL:0002078,1.28e-09,45;CL:0002321,3.79e-08,250;CL:0000136,9.38e-08,15 | |||
|ontology_enrichment_development_v019=CL:0002546;3.22e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!6.63e-21!113;UBERON:0004535!1.11e-19!110;UBERON:0002049!2.25e-18!79;UBERON:0007798!2.25e-18!79;UBERON:0000055!7.20e-17!69;UBERON:0003914!1.13e-16!118;UBERON:0004872!2.92e-16!84;UBERON:0001981!2.44e-14!60;UBERON:0007500!2.44e-14!60;UBERON:0004537!2.44e-14!60;UBERON:0006965!2.44e-14!60;UBERON:0000490!2.25e-13!138;UBERON:0004111!1.31e-12!241;UBERON:0000477!2.54e-11!286;UBERON:0000119!1.16e-10!312;UBERON:0000483!1.89e-10!309;UBERON:0001637!9.21e-10!42;UBERON:0003509!9.21e-10!42;UBERON:0004572!9.21e-10!42;UBERON:0001986!3.81e-09!18;UBERON:0004638!3.81e-09!18;UBERON:0004852!3.81e-09!18;UBERON:0000468!1.05e-08!659;UBERON:0004573!1.39e-08!33;UBERON:0004571!1.39e-08!33;UBERON:0002100!2.17e-08!216;UBERON:0000025!2.53e-08!194;UBERON:0000947!2.61e-08!21;UBERON:0010191!2.61e-08!21;UBERON:0000467!4.45e-08!625;UBERON:0000475!6.04e-08!365;UBERON:0000480!7.71e-08!626;UBERON:0005256!1.87e-07!143;UBERON:0002385!8.77e-07!63;UBERON:0001015!8.77e-07!63;UBERON:0000383!8.77e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.22e-10;18!UBERON:0001986;3.22e-10;18!UBERON:0004852;3.22e-10;18!UBERON:0000055;5.13e-10;65!UBERON:0004573;1.19e-09;33!UBERON:0004571;1.19e-09;33!UBERON:0000947;4.52e-09;21!UBERON:0010191;4.52e-09;21!UBERON:0001637;5.47e-09;42!UBERON:0003509;5.47e-09;42!UBERON:0004572;5.47e-09;42!UBERON:0007500;2.21e-08;56!UBERON:0001981;2.21e-08;56!UBERON:0004537;2.21e-08;56!UBERON:0002049;2.34e-08;75!UBERON:0007798;2.34e-08;75!UBERON:0000487;6.53e-08;22!UBERON:0006914;1.16e-07;25!UBERON:0001009;2.20e-07;112!UBERON:0007100;5.33e-07;25!UBERON:0004535;7.74e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,1.01e-23,112;UBERON:0004535,2.57e-22,109;UBERON:0002049,4.55e-21,78;UBERON:0007798,4.55e-21,78;UBERON:0000055,1.04e-19,68;UBERON:0004872,6.18e-19,83;UBERON:0003914,1.77e-17,117;UBERON:0007500,1.70e-16,59;UBERON:0001981,1.70e-16,59;UBERON:0004537,1.70e-16,59;UBERON:0006965,1.70e-16,59;UBERON:0000490,2.37e-12,148;UBERON:0001637,4.16e-11,42;UBERON:0003509,4.16e-11,42;UBERON:0004572,4.16e-11,42;UBERON:0004111,7.90e-11,240;UBERON:0004638,3.15e-10,18;UBERON:0001986,3.15e-10,18;UBERON:0004852,3.15e-10,18;UBERON:0004573,3.46e-10,33;UBERON:0004571,3.46e-10,33;UBERON:0000119,6.93e-10,309;UBERON:0000483,1.15e-09,306;UBERON:0005256,2.15e-09,122;UBERON:0000947,2.83e-09,21;UBERON:0010191,2.83e-09,21;UBERON:0002100,1.70e-08,199;UBERON:0000487,5.67e-08,22;UBERON:0006914,7.21e-08,25;UBERON:0003104,8.53e-08,160;UBERON:0009142,8.53e-08,160;UBERON:0002385,9.81e-08,64;UBERON:0001015,9.81e-08,64;UBERON:0000383,9.81e-08,64;UBERON:0007100,1.86e-07,27;UBERON:0001134,3.10e-07,62;UBERON:0002036,3.10e-07,62;UBERON:0003082,3.10e-07,62;UBERON:0000025,7.99e-07,192 | |||
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| ||
|short_description=p4@TGFBR2 | |||
}} | }} |
Latest revision as of 22:13, 17 September 2015
Short description: | p4@TGFBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TGFBR2_5end |
Coexpression cluster: | C4324_Endothelial_Lymphatic_Hepatic_Smooth_Neutrophils_adipose_breast |
Association with transcript: | 3bp_to_ENST00000295754, NM_001024847, NM_003242, uc003cen.2, uc003ceo.2_5end |
EntrezGene: | TGFBR2 |
HGNC: | 11773 |
UniProt: | P37173D2JYI1A3QNQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.16e-14 | 24 |
endothelial cell | 2.43e-12 | 36 |
mesodermal cell | 5.72e-11 | 121 |
blood vessel endothelial cell | 3.15e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.15e-10 | 18 |
meso-epithelial cell | 1.28e-09 | 45 |
embryonic cell | 3.79e-08 | 250 |
fat cell | 9.38e-08 | 15 |