FFCP PHASE1:Hg19::chr3:98275094..98275103,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:98275094..98275103,- | |||
|coexpression_cluster_id=C1931 | |||
|description=CAGE_peak_at_chr3:98275094..98275103,- | |||
|id=chr3:98275094..98275103,- | |||
|ontology_enrichment_celltype=CL:0000453!2.26e-10!5;CL:0000080!1.48e-09!6;CL:0000988!2.15e-09!182;CL:0000037!1.09e-07!172;CL:0000566!1.09e-07!172;CL:0002032!1.64e-07!165;CL:0000837!1.64e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0002127;9.28e-16;1!CL:0000911;9.28e-16;1!CL:0000814;9.28e-16;1!CL:1000415;1.39e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.99e-16,1;CL:0000914,9.99e-16,1;CL:0000911,9.99e-16,1;CL:0000814,9.99e-16,1;CL:0002042,9.99e-16,1;CL:0002039,9.99e-16,1;CL:0002040,9.99e-16,1;CL:0002041,9.99e-16,1;CL:1000415,1.39e-08,2;CL:0000893,1.61e-08,2;CL:0002489,1.61e-08,2;CL:0000809,1.61e-08,2;CL:0000808,1.61e-08,2;CL:0000894,1.61e-08,2;CL:0000806,1.61e-08,2;CL:0000807,1.61e-08,2;CL:0000805,1.61e-08,2;CL:0002425,1.61e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.55e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!5.87e-07!51;DOID:0060083!5.87e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.21e-15;1!DOID:0060061;2.21e-15;1!DOID:8691;2.21e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.06e-15,1;DOID:0060061,2.06e-15,1;DOID:8691,2.06e-15,1;DOID:2531,6.91e-07,51;DOID:0060083,6.91e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;5.56e-16;1!UBERON:0009842;5.56e-16;1!UBERON:0003704;5.56e-16;1!UBERON:0001171;5.56e-16;1!UBERON:0001172;5.56e-16;1!UBERON:0002331;1.71e-13;10!UBERON:0002294;2.80e-09;7!UBERON:0001173;2.80e-09;7!UBERON:0000178;3.44e-09;15!UBERON:0000179;3.44e-09;15!UBERON:0000463;3.44e-09;15!UBERON:0002390;2.90e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,5.56e-16,1;UBERON:0009842,5.56e-16,1;UBERON:0003704,5.56e-16,1;UBERON:0001171,5.56e-16,1;UBERON:0001172,5.56e-16,1;UBERON:0002331,1.54e-13,10;UBERON:0000358,1.54e-13,10;UBERON:0000307,1.54e-13,10;UBERON:0000091,1.54e-13,10;UBERON:0000087,1.54e-13,10;UBERON:0007010,1.54e-13,10;UBERON:0007806,1.54e-13,10;UBERON:0008780,1.54e-13,10;UBERON:0005728,1.54e-13,10;UBERON:0000178,3.21e-09,15;UBERON:0000179,3.21e-09,15;UBERON:0000463,3.21e-09,15;UBERON:0004177,4.76e-09,7;UBERON:0005057,4.76e-09,7;UBERON:0002294,2.08e-07,9;UBERON:0001173,2.08e-07,9;UBERON:0004912,2.08e-07,9 | |||
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| ||
|short_description=p@chr3:98275094..98275103,- | |||
}} | }} |
Latest revision as of 00:02, 30 July 2015
Short description: | p@chr3:98275094..98275103, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98275094..98275103, - |
Coexpression cluster: | C1931_cholangiocellular_NK_cord_gall_glioma_CD4_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.99e-16 | 1 |
immature NK T cell | 9.99e-16 | 1 |
effector T cell | 9.99e-16 | 1 |
mature NK T cell | 9.99e-16 | 1 |
immature NK T cell stage IV | 9.99e-16 | 1 |
immature NK T cell stage I | 9.99e-16 | 1 |
immature NK T cell stage II | 9.99e-16 | 1 |
immature NK T cell stage III | 9.99e-16 | 1 |
epithelial cell of gall bladder | 1.39e-08 | 2 |
thymocyte | 1.61e-08 | 2 |
double negative thymocyte | 1.61e-08 | 2 |
double-positive, alpha-beta thymocyte | 1.61e-08 | 2 |
DN4 thymocyte | 1.61e-08 | 2 |
DN1 thymic pro-T cell | 1.61e-08 | 2 |
DN2 thymocyte | 1.61e-08 | 2 |
DN3 thymocyte | 1.61e-08 | 2 |
immature single positive thymocyte | 1.61e-08 | 2 |
early T lineage precursor | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 5.56e-16 | 1 |
acinus | 5.56e-16 | 1 |
intrahepatic bile duct | 5.56e-16 | 1 |
portal lobule | 5.56e-16 | 1 |
hepatic acinus | 5.56e-16 | 1 |
umbilical cord | 1.54e-13 | 10 |
blastocyst | 1.54e-13 | 10 |
blastula | 1.54e-13 | 10 |
bilaminar disc | 1.54e-13 | 10 |
inner cell mass | 1.54e-13 | 10 |
cleaving embryo | 1.54e-13 | 10 |
connecting stalk | 1.54e-13 | 10 |
inner cell mass derived epiblast | 1.54e-13 | 10 |
extraembryonic mesoderm | 1.54e-13 | 10 |
blood | 3.21e-09 | 15 |
haemolymphatic fluid | 3.21e-09 | 15 |
organism substance | 3.21e-09 | 15 |
hemopoietic organ | 4.76e-09 | 7 |
immune organ | 4.76e-09 | 7 |
biliary system | 2.08e-07 | 9 |
biliary tree | 2.08e-07 | 9 |
biliary bud | 2.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.06e-15 | 1 |
cutaneous T cell lymphoma | 2.06e-15 | 1 |
mycosis fungoides | 2.06e-15 | 1 |
hematologic cancer | 6.91e-07 | 51 |
immune system cancer | 6.91e-07 | 51 |