FFCP PHASE1:Hg19::chr5:110409038..110409052,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:110409038..110409052,+ to FFCP PHASE1:Hg19::chr5:110409038..110409052,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85480 | |EntrezGene=85480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30743 | |HGNC=30743 | ||
|TSSclassifier=strong | |||
|UniProt=Q96AU7 | |UniProt=Q96AU7 | ||
|association_with_transcript=12bp_to_uc010jbt.1_5end | |||
|cluster_id=chr5:110409038..110409052,+ | |||
|coexpression_cluster_id=C1948 | |||
|description=CAGE_peak_4_at_TSLP_5end | |||
|id=chr5:110409038..110409052,+ | |||
|ontology_enrichment_celltype=CL:0000393!6.20e-12!60;CL:0000211!6.20e-12!60;CL:0000680!3.58e-11!57;CL:0000056!3.58e-11!57;CL:0000355!3.58e-11!57;CL:0000192!5.99e-10!42;CL:0000514!5.99e-10!42;CL:0000187!6.36e-10!54;CL:0000055!1.58e-09!180;CL:0000183!2.22e-08!59;CL:0000359!7.44e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.84e-08;43!CL:0000359;4.14e-08;32!CL:0000569;4.58e-08;4!CL:0002594;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.71e-10,58;CL:0000056,2.71e-10,58;CL:0000355,2.71e-10,58;CL:0000192,1.19e-09,43;CL:0000514,1.19e-09,43;CL:0000393,7.04e-09,61;CL:0000211,7.04e-09,61;CL:0000359,1.76e-08,32;CL:0000187,2.58e-08,55;CL:0000569,7.88e-08,4;CL:0000011,7.88e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000514;3.84e-08;43!CL:0000011;4.58e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.17e-10!63;UBERON:0001015!3.17e-10!63;UBERON:0000383!3.17e-10!63;UBERON:0001134!7.97e-10!61;UBERON:0002036!7.97e-10!61;UBERON:0003082!7.97e-10!61;UBERON:0000914!1.34e-09!83;UBERON:0002329!1.34e-09!83;UBERON:0003077!1.34e-09!83;UBERON:0003059!1.34e-09!83;UBERON:0007282!1.34e-09!83;UBERON:0009618!1.34e-09!83;UBERON:0007285!1.34e-09!83;UBERON:0004290!6.04e-09!70;UBERON:0000481!1.80e-08!347;UBERON:0001637!3.00e-07!42;UBERON:0003509!3.00e-07!42;UBERON:0004572!3.00e-07!42;UBERON:0000486!6.37e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;5.81e-07;11!UBERON:0010147;5.81e-07;11!UBERON:0001310;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,1.20e-09,64;UBERON:0001015,1.20e-09,64;UBERON:0000383,1.20e-09,64;UBERON:0001134,3.32e-09,62;UBERON:0002036,3.32e-09,62;UBERON:0003082,3.32e-09,62;UBERON:0005256,3.20e-08,122;UBERON:0007503,1.98e-07,78;UBERON:0002329,3.04e-07,71;UBERON:0003059,3.04e-07,71;UBERON:0007282,3.04e-07,71;UBERON:0004290,3.04e-07,71;UBERON:0009618,3.04e-07,71;UBERON:0000490,4.43e-07,148;UBERON:0003077,4.65e-07,72;UBERON:0007285,4.65e-07,72;UBERON:0003104,5.96e-07,160;UBERON:0009142,5.96e-07,160;UBERON:0002367,6.43e-07,11;UBERON:0010147,6.43e-07,11;UBERON:0009846,6.43e-07,11;UBERON:0003353,6.43e-07,11;UBERON:0004902,6.43e-07,11;UBERON:0003820,6.43e-07,11;UBERON:0009847,6.43e-07,11;UBERON:0007524,7.01e-07,73 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,2.53299878168311,1.89515962028049,0,0.245733936501509,1.39560233594486,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0.246242116153576,0.816002764977012,0.626909442956176,0,1.09499540058307,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0,2.21852406100073,0.0774672005803016,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0,0,1.47311054395026,0.632924774881769,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,1.33037638477538,0.966182642624386,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0.993943903390637,0.886413581652058,2.1185468930115,1.72101972449288,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.942974704487816,0,0.908144565869588,0.576175924479999,3.04617861383936,0.312160076830321,0,0.747243402759005,0.939475989150119,0.323745888736263,0.140450806702248,0.816616685019573,0.245668634623536,0.619954687054593,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0.125118519871964,0.554128230968366,0.438977620880838,0,0.300476117813194,0.340296549480063,0.179389635688862,1.49490172172997,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0.323292113637624,0,0.10075209822764,0,0.193260853163297,0,0,0.243947412259191,0,0,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,1.96565443335525,0,0.441463099414651,0,0.343135620597051,0.109750285408626,3.37205259772859,0.502644862058154,0,2.6064664424826,0,4.3299402607582,0.115930404975077,3.99189560401794,0,0,0.570762456703795,0,0,0,0,0,0.93733833986777,0.671928512795438,0,2.50763863567975,0.290633938513962,0,1.47798971368783,0.616339038092582,2.28060927094849,0.432359860250884,1.64115163454294,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,1.03417372606222,0,0.845302752556,0.26593811658487,0,0,0,0,1.57275793023962,0,0,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,3.59437283237374,2.29723871668228,1.42636905040718,1.15825045334063,1.64381058040307,1.25342674267927,0.112085143993527,0,0,0,0.76228387266739,0,3.09315525111078,0.502548796003046,2.55175500661265,0,0,0,0.36807447515742,1.00034104211935,1.08506009479894,1.03985430765404,1.42743191037729,0.788512075169673,0,0.601892199455438,2.27407504055985,2.0694614258501,0,0.184369168541703,0.347534457872331,0.587403472388222,0,0,0.215714200818617,0,0,0,0,0.496215615637554,0,0,0.640695746278505,0,0,0,0,0.887808626565635,1.06765302817952,2.59627214591811,1.27831416305955,0,0.200506470303285,1.84161977871793,2.18147451512753,2.00300284807389,3.14698595902618,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0.656029291399411,3.57916234130733,0.618246069886334,0,0,0,0.650060246036521,0,5.7035723792352,0.616194468458578,0.307007349452259,0.275673144969061,0.214840489736547,0,0.255679882248303,0.534192213880424,1.98341898433174,2.69066094311149,0.127612712494584,3.2370489873776,2.78907329578371,1.25924938732256,0,2.15623506123262,0.532306030317022,0.869932992075073,0.9266210955196,1.71749864090389,0.372158369359667,1.58189712359363,0,0.767693373934002,2.99557291623744,1.59101623962968,4.70969184119538,0.539617372749944,0.274537029736055,0.235624804691373,0.808729926293264,0,0.842516912477962,0.48763373908959,0.487426979262569,1.05650146756755,2.18399858252777,2.68670320712054,1.13008116620243,1.10273068709225,1.99031692572366,1.31535265576129,0,0.655894752046633,2.23201414658974,1.239293992399,1.40847801266121,0.860468113224309,0.0982490410131212,2.1400263088875,2.83808851256478,0,0,0,0,1.34710957815717,0.670302275535787,0,0.659006605437454,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,1.11598390910176,0,0,0,0.324621940274555,0.280797178113459,0,0,0,0,0,0,1.70338495076131,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0.994147647766298,0,2.00355669041231,0,0,0.398495976502139,0.276283915531148,0,0.511343412510774,0,2.79935628895627,0,0,0,0.986434056369336,0,0,0,0.278304294485554,0,0,0,0,0.227586896570999,0,0,0.344743373241465,1.74962768029953,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.219385397153973,1.41620002574687,4.0432885840795,0.538651809526579,0,0.23056390438806,0,0.108647371922008,0,0.274792780205587,0,1.02193298195737,0,0.332423363800313,0,0,0,0.189753732724185,0.317873157960757,0,0,0,0,0,0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| ||
|short_description=p4@TSLP | |||
}} | }} |
Latest revision as of 16:59, 19 September 2015
Short description: | p4@TSLP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TSLP_5end |
Coexpression cluster: | C1948_mesenchymal_Smooth_Skeletal_Lens_Keratocytes_cervical_salivary |
Association with transcript: | 12bp_to_uc010jbt.1_5end |
EntrezGene: | TSLP |
HGNC: | 30743 |
UniProt: | Q96AU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.71e-10 | 58 |
myoblast | 2.71e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.71e-10 | 58 |
smooth muscle cell | 1.19e-09 | 43 |
smooth muscle myoblast | 1.19e-09 | 43 |
electrically responsive cell | 7.04e-09 | 61 |
electrically active cell | 7.04e-09 | 61 |
vascular associated smooth muscle cell | 1.76e-08 | 32 |
muscle cell | 2.58e-08 | 55 |
cardiac mesenchymal cell | 7.88e-08 | 4 |
migratory trunk neural crest cell | 7.88e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 1.20e-09 | 64 |
musculature | 1.20e-09 | 64 |
musculature of body | 1.20e-09 | 64 |
skeletal muscle tissue | 3.32e-09 | 62 |
striated muscle tissue | 3.32e-09 | 62 |
myotome | 3.32e-09 | 62 |
trunk mesenchyme | 3.20e-08 | 122 |
epithelial vesicle | 1.98e-07 | 78 |
somite | 3.04e-07 | 71 |
presomitic mesoderm | 3.04e-07 | 71 |
presumptive segmental plate | 3.04e-07 | 71 |
dermomyotome | 3.04e-07 | 71 |
trunk paraxial mesoderm | 3.04e-07 | 71 |
unilaminar epithelium | 4.43e-07 | 148 |
paraxial mesoderm | 4.65e-07 | 72 |
presumptive paraxial mesoderm | 4.65e-07 | 72 |
mesenchyme | 5.96e-07 | 160 |
entire embryonic mesenchyme | 5.96e-07 | 160 |
prostate gland | 6.43e-07 | 11 |
male accessory sex gland | 6.43e-07 | 11 |
embryonic cloacal epithelium | 6.43e-07 | 11 |
epithelium of hindgut | 6.43e-07 | 11 |
urogenital sinus epithelium | 6.43e-07 | 11 |
prostate bud | 6.43e-07 | 11 |
prostate field | 6.43e-07 | 11 |
dense mesenchyme tissue | 7.01e-07 | 73 |