FFCP PHASE1:Hg19::chr5:19988288..19988330,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:19988288..19988330,- to FFCP PHASE1:Hg19::chr5:19988288..19988330,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1016 | |EntrezGene=1016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1757 | |HGNC=1757 | ||
|TSSclassifier=strong | |||
|UniProt=B4DHG6,D6RIH8 | |UniProt=B4DHG6,D6RIH8 | ||
|association_with_transcript=0bp_to_ENST00000502796,ENST00000503132,ENST00000511273,ENST00000511423,uc003jgd.2,uc011cnm.1_5end | |||
|cluster_id=chr5:19988288..19988330,- | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_1_at_CDH18_5end | |||
|id=chr5:19988288..19988330,- | |||
|ontology_enrichment_celltype=CL:0002620!4.83e-07!23 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.92e-16;82!UBERON:0006215;1.44e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.24e-41!57;UBERON:0005068!3.24e-41!57;UBERON:0006241!3.24e-41!57;UBERON:0007135!3.24e-41!57;UBERON:0001017!7.90e-41!82;UBERON:0000073!9.97e-40!94;UBERON:0001016!9.97e-40!94;UBERON:0005743!3.56e-39!86;UBERON:0000955!2.54e-36!69;UBERON:0006238!2.54e-36!69;UBERON:0002616!6.11e-35!59;UBERON:0002780!1.17e-32!41;UBERON:0001890!1.17e-32!41;UBERON:0006240!1.17e-32!41;UBERON:0003080!1.68e-31!42;UBERON:0003075!1.51e-27!86;UBERON:0007284!1.51e-27!86;UBERON:0002346!1.90e-27!90;UBERON:0002020!6.38e-26!34;UBERON:0003528!6.38e-26!34;UBERON:0001893!7.04e-26!34;UBERON:0002791!7.51e-25!33;UBERON:0001869!1.73e-24!32;UBERON:0000033!2.31e-22!123;UBERON:0003056!6.68e-22!61;UBERON:0002619!1.15e-21!22;UBERON:0000153!6.83e-21!129;UBERON:0007811!6.83e-21!129;UBERON:0000924!1.63e-20!173;UBERON:0006601!1.63e-20!173;UBERON:0004121!3.04e-20!169;UBERON:0001950!9.54e-20!20;UBERON:0007023!1.01e-19!115;UBERON:0000956!4.60e-18!25;UBERON:0000203!4.60e-18!25;UBERON:0000475!4.88e-13!365;UBERON:0003076!1.22e-10!15;UBERON:0003057!1.22e-10!15;UBERON:0002420!1.44e-09!9;UBERON:0007245!1.44e-09!9;UBERON:0010009!1.44e-09!9;UBERON:0010011!1.44e-09!9;UBERON:0000454!1.44e-09!9;UBERON:0002308!2.07e-09!9;UBERON:0000125!2.07e-09!9;UBERON:0001894!2.90e-08!7;UBERON:0006222!2.90e-08!7;UBERON:0004733!3.36e-08!12;UBERON:0002028!3.36e-08!12;UBERON:0007277!3.36e-08!12;UBERON:0000200!6.06e-08!6;UBERON:0000481!9.11e-08!347;UBERON:0000025!9.70e-08!194;UBERON:0009663!1.42e-07!7;UBERON:0000483!1.42e-07!309;UBERON:0000468!2.35e-07!659;UBERON:0004732!2.55e-07!13;UBERON:0000119!2.92e-07!312;UBERON:0001871!5.64e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.24e-37;41!UBERON:0001890;1.24e-37;41!UBERON:0001869;7.66e-37;32!UBERON:0000073;1.20e-36;53!UBERON:0002616;1.20e-36;53!UBERON:0003528;5.18e-36;34!UBERON:0002020;5.18e-36;34!UBERON:0001893;8.94e-36;34!UBERON:0002619;3.86e-35;22!UBERON:0002791;3.15e-34;32!UBERON:0001950;9.92e-32;20!UBERON:0000956;2.90e-30;25!UBERON:0000203;2.90e-30;25!UBERON:0000955;8.68e-26;68!UBERON:0001017;9.72e-25;75!UBERON:0001016;2.12e-21;83!UBERON:0001894;1.56e-13;7!UBERON:0002420;5.53e-13;9!UBERON:0007245;5.53e-13;9!UBERON:0010009;5.53e-13;9!UBERON:0010011;5.53e-13;9!UBERON:0000454;5.53e-13;9!UBERON:0000200;5.96e-13;6!UBERON:0000125;9.96e-13;9!UBERON:0002308;9.96e-13;9!UBERON:0004733;2.60e-12;12!UBERON:0002028;2.60e-12;12!UBERON:0002298;2.68e-11;6!UBERON:0004732;3.39e-11;13!UBERON:0011216;9.57e-11;132!UBERON:0001872;1.98e-10;5!UBERON:0000349;2.20e-10;5!UBERON:0002021;3.54e-10;5!UBERON:0007023;5.72e-10;114!UBERON:0009663;1.57e-09;7!UBERON:0003296;6.49e-09;4!UBERON:0010133;6.49e-09;4!UBERON:0000369;2.08e-08;4!UBERON:0002435;2.08e-08;4!UBERON:0000204;2.08e-08;4!UBERON:0002784;2.37e-08;4!UBERON:0002680;5.39e-08;9!UBERON:0001895;5.39e-08;9!UBERON:0001871;1.63e-07;6!UBERON:0001870;1.95e-07;3!UBERON:0010314;9.25e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.33e-70,56;UBERON:0005068,8.33e-70,56;UBERON:0006241,8.33e-70,56;UBERON:0007135,8.33e-70,56;UBERON:0000073,4.77e-65,53;UBERON:0002616,4.77e-65,53;UBERON:0000955,1.83e-56,68;UBERON:0006238,1.83e-56,68;UBERON:0001017,4.47e-56,81;UBERON:0001016,5.01e-55,89;UBERON:0002780,1.12e-53,41;UBERON:0001890,1.12e-53,41;UBERON:0003080,1.12e-53,41;UBERON:0006240,1.12e-53,41;UBERON:0003075,4.52e-47,82;UBERON:0007284,4.52e-47,82;UBERON:0002346,4.17e-46,86;UBERON:0001869,9.26e-42,32;UBERON:0003528,1.01e-41,34;UBERON:0002020,1.01e-41,34;UBERON:0001893,1.20e-41,34;UBERON:0002791,1.95e-38,32;UBERON:0010371,1.77e-35,104;UBERON:0002619,3.74e-35,22;UBERON:0003056,2.97e-34,61;UBERON:0001950,9.88e-32,20;UBERON:0000956,2.82e-30,25;UBERON:0000203,2.82e-30,25;UBERON:0007023,5.46e-30,114;UBERON:0010314,2.59e-28,132;UBERON:0004121,3.49e-27,171;UBERON:0000924,3.49e-27,171;UBERON:0006601,3.49e-27,171;UBERON:0011216,1.11e-24,223;UBERON:0003076,1.41e-16,15;UBERON:0003057,1.41e-16,15;UBERON:0000025,1.58e-14,192;UBERON:0001894,1.64e-13,7;UBERON:0006222,1.64e-13,7;UBERON:0002420,5.23e-13,9;UBERON:0007245,5.23e-13,9;UBERON:0010009,5.23e-13,9;UBERON:0010011,5.23e-13,9;UBERON:0000454,5.23e-13,9;UBERON:0000200,6.09e-13,6;UBERON:0000125,9.36e-13,9;UBERON:0002308,9.36e-13,9;UBERON:0004733,2.74e-12,12;UBERON:0002028,2.74e-12,12;UBERON:0007277,2.74e-12,12;UBERON:0002298,2.86e-11,6;UBERON:0004732,3.54e-11,13;UBERON:0001872,1.87e-10,5;UBERON:0000349,2.14e-10,5;UBERON:0002021,3.79e-10,5;UBERON:0009663,1.49e-09,7;UBERON:0004111,1.90e-09,240;UBERON:0003296,6.56e-09,4;UBERON:0010133,6.56e-09,4;UBERON:0000369,2.00e-08,4;UBERON:0002435,2.00e-08,4;UBERON:0000204,2.00e-08,4;UBERON:0010082,2.00e-08,4;UBERON:0002784,2.47e-08,4;UBERON:0000483,2.68e-08,306;UBERON:0000119,4.52e-08,309;UBERON:0002680,5.36e-08,9;UBERON:0001895,5.36e-08,9;UBERON:0010092,5.36e-08,9;UBERON:0001871,1.61e-07,6;UBERON:0001870,2.00e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,6.55961670688247,5.63375538737457,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98613771219828,5.16305917347865,1.06400514659507,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0.939475989150119,0.323745888736263,0.561803226808994,0.408308342509787,0.368502951935304,0.206651562351531,0,0,0,0,1.17835279767846,0.875829639103749,0.554128230968366,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0.558350568994769,11.8143432568886,4.48210223741514,0.757301322732344,0.552299391853796,0.484938170456436,3.19508633264953,1.0075209822764,0.508681776931463,0,0,0,0,0.265059536642971,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,3.95102198979638,5.15091697256924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0.718874566474748,1.14861935834114,0,1.15825045334063,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.502548796003046,0,0,0,0,6.62534055283355,1.00034104211935,0.271265023699736,0.831883446123229,14.2743191037729,4.25796520591624,2.45996971484698,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,1.50388342815583,0.870100163485371,0.255679882248303,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0,0,1.07923474549989,1.09814811894422,0.589062011728432,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0.30982349809975,0.281695602532241,0.717056761020258,0.196498082026242,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,36.783462967353,27.2898667836395,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,1.11136990144637,7.75466196876175,39.1481374243012,9.98068990005971,8.85454387689793,0,0,0,0,0,0.344743373241465,0.291604613383254,46.0106236573224,8.85741385813839,19.7778159345669,88.4974070639083,215.518977605957,73.5913571194333,19.7446857438575,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,3.43745778201453,0,6.32514003458416,0,0,0,0,0,0.61214552326098,1.45329133145522,0,0,0,0,0,0,0,15.6702380504847,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,2.03382666702479,0.274083849293502,0,66.6662681415403,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,1.15580235960608,4.20294202096853,5.75002591346371,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,16.6998234859954,20.8391211350711,0.321506296930038,0.275078873194468,0.83088067605837,0,0,43.6789312371197,0,0.157611414598396,0.157363764404994,0,5.73719485865103,0,0,0,0,2.17199840701485,2.5926644736038,5.55198512185996,0,0.082092520749339,0.340776043570843,0,0,0,12.9282956361551,14.4133535899532,0,0,0,0.943225830597996,0,0,0,0,0,0,0,0,0,0,49.6198180781512,49.664689815099,60.7176013926524,4.0138643698305,16.4174996274541,9.06607482944198,0,0.874862855734746,0,0,0,0,0.869526171664951,0.149254802886874,0,0,0.189403005275089,0.50313580350515,0,0.457680136793847,0.604923695052956,0.466311601748341,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,1.18151612746737,0,0,0,1.37358282073117,2.69399591012735,11.3566408405786,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0,2.14906609297785,0,0,0.706756583783524,0,0,0,0,0,53.6442732268715,0,0,0,0,2.21195617878347,0,0,0,1.03328987796489,3.40509572140102,7.54834396032547,0,0,0.639471856518258,0.431299245586727,0,1.20130602011215,0,3.18862380152524,0,0,0,0,8.0057074828547,36.3256222001404,0,33.7845724007377,48.1768359506989,43.5800435226023,30.972571000354,2.01657356977374,26.5563849462597,35.3631663933754,0,0,0,0,0,3.05105676373734,0,0,0,0,0,0,0,0,43.5617420788645,40.6160611279201,66.9665220663836,44.9618094274799,3.82882366312754,0,0.496211178389294,0.175871244359621,0.127762427639595,22.499477106888,39.0089117773836,27.3134521906484,65.5667111091737,0,0.115233987555779,0,20.3909198930495,34.85956998831,0,0,0.235479278551542,21.3677202285763,0,4.56579360254748,0.215927591218621,0,1.1436247068265,0.47404083519818,0,0,0,0.62164849248911,0.17071847709395,0,0,4.02328802483922,4.4310970474762,0,0.9164274741762,0,0,0,0,0,0,0,1.1598144313382,6.31424290976881,0,0,0,0,0.76958361721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| ||
|short_description=p1@CDH18 | |||
}} | }} |
Latest revision as of 12:45, 17 September 2015
Short description: | p1@CDH18 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDH18_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_ENST00000502796, ENST00000503132, ENST00000511273, ENST00000511423, uc003jgd.2, uc011cnm.1_5end |
EntrezGene: | CDH18 |
HGNC: | 1757 |
UniProt: | B4DHG6D6RIH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data