FFCP PHASE1:Hg19::chr5:36151937..36151954,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:36151937..36151954,- to FFCP PHASE1:Hg19::chr5:36151937..36151954,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92255 | |EntrezGene=92255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25287 | |HGNC=25287 | ||
|TSSclassifier=strong | |||
|UniProt=B4DTZ7 | |UniProt=B4DTZ7 | ||
|association_with_transcript=56bp_to_ENST00000546130_5end | |||
|cluster_id=chr5:36151937..36151954,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_LMBRD2_5end | |||
|id=chr5:36151937..36151954,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.81e-14!57;UBERON:0005068!5.81e-14!57;UBERON:0006241!5.81e-14!57;UBERON:0007135!5.81e-14!57;UBERON:0003080!1.99e-13!42;UBERON:0002619!2.40e-13!22;UBERON:0002780!5.50e-13!41;UBERON:0001890!5.50e-13!41;UBERON:0006240!5.50e-13!41;UBERON:0000955!2.70e-12!69;UBERON:0006238!2.70e-12!69;UBERON:0001950!3.02e-12!20;UBERON:0002616!5.89e-12!59;UBERON:0001017!5.20e-11!82;UBERON:0000956!5.69e-11!25;UBERON:0000203!5.69e-11!25;UBERON:0001869!7.40e-11!32;UBERON:0005743!2.38e-10!86;UBERON:0002020!4.24e-10!34;UBERON:0003528!4.24e-10!34;UBERON:0001893!4.48e-10!34;UBERON:0002791!1.85e-09!33;UBERON:0000073!2.21e-09!94;UBERON:0001016!2.21e-09!94;UBERON:0007023!3.43e-09!115;UBERON:0002346!9.91e-09!90;UBERON:0003075!2.61e-08!86;UBERON:0007284!2.61e-08!86;UBERON:0003056!2.34e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.71e-32;22!UBERON:0001950;3.55e-31;20!UBERON:0000956;2.52e-28;25!UBERON:0000203;2.52e-28;25!UBERON:0001869;1.20e-25;32!UBERON:0002791;1.68e-23;32!UBERON:0003528;7.45e-23;34!UBERON:0002020;7.45e-23;34!UBERON:0001893;1.21e-22;34!UBERON:0002780;1.50e-18;41!UBERON:0001890;1.50e-18;41!UBERON:0000200;8.13e-16;6!UBERON:0000073;1.95e-13;53!UBERON:0002616;1.95e-13;53!UBERON:0001872;5.72e-12;5!UBERON:0001870;1.24e-11;3!UBERON:0000955;1.01e-09;68!UBERON:0001017;1.48e-08;75!UBERON:0002702;2.58e-08;2!UBERON:0002021;3.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.12e-33,22;UBERON:0001950,1.40e-31,20;UBERON:0000956,8.76e-29,25;UBERON:0000203,8.76e-29,25;UBERON:0001869,1.42e-28,32;UBERON:0002780,1.35e-27,41;UBERON:0001890,1.35e-27,41;UBERON:0003080,1.35e-27,41;UBERON:0006240,1.35e-27,41;UBERON:0001893,1.07e-26,34;UBERON:0003528,2.27e-26,34;UBERON:0002020,2.27e-26,34;UBERON:0000073,2.19e-25,53;UBERON:0002616,2.19e-25,53;UBERON:0002791,5.62e-25,32;UBERON:0001049,9.08e-24,56;UBERON:0005068,9.08e-24,56;UBERON:0006241,9.08e-24,56;UBERON:0007135,9.08e-24,56;UBERON:0000955,1.77e-20,68;UBERON:0006238,1.77e-20,68;UBERON:0003056,3.10e-19,61;UBERON:0001017,3.19e-18,81;UBERON:0003075,2.38e-16,82;UBERON:0007284,2.38e-16,82;UBERON:0000200,2.43e-16,6;UBERON:0001016,7.05e-16,89;UBERON:0002346,2.39e-15,86;UBERON:0001870,1.97e-12,3;UBERON:0001872,5.50e-12,5;UBERON:0010371,8.41e-12,104;UBERON:0010314,3.01e-10,132;UBERON:0000025,5.33e-09,192;UBERON:0002702,8.75e-09,2;UBERON:0007023,1.75e-08,114;UBERON:0002021,4.79e-07,5 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0.491467873003018,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.157421562627358,1.57345710739562,0,0.309632246632152,0,0.30120591877825,0,0.774672005803016,0.142169232487422,0.293600439334847,0,0.601633342410425,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0.329851300186716,0,0.852449501065388,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0.552700035571697,0,0.296573126324121,0,0,0,0.766440987203842,0.68725489096526,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0.534880391567015,0.724122019413995,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0.263504357079378,0.130979075497713,0,0,0.649094787309367,0.348259474598534,0.26591592103773,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,1.05927344650575,0,0.354668382198357,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0.312160076830321,0,0,0.23486899728753,0,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0.554128230968366,0,0,0.300476117813194,0.113432183160021,0.538168907066586,0.427114777637135,0,0.600182192168805,0.103052529238439,0.257640540045629,0,0.506328996723799,0.292311015483596,0.252433774244115,0.276149695926898,0.161646056818812,0.710019185033229,0.503760491138201,0.339121184620975,0,0,0,0,0.132529768321485,0,0.207322110030741,0,1.09493207722749,0,0.643240938192885,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.441175890929576,0.871517776369625,0.949082476444386,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,0.983907508344908,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0.702012795417713,0.297262324577456,0.93733833986777,0.671928512795438,0,0.268675568108545,0,0.383382679165211,15.2725603747742,5.89924507888615,0.414656231081544,0.432359860250884,0.25248486685276,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0.646358578788889,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.710783897485092,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0.723906533337896,0.205476322550383,0.537182889719687,0.112085143993527,0.197030760201927,0.431255149719035,1.28343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0.623912584592421,0.713715955188647,0.473107245101804,0.468565659970853,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0,0.213455115606889,0.303127571446259,0,0,0.496215615637554,0.920771839728375,0,0.384417447767103,1.02341449813341,0.321707842287215,0,0.308419387605311,0.532685175939381,0.164254312027618,0,0,0.846016147141356,0.200506470303285,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.0915694648183434,0.495056999523528,0,0,0,0.290012154876366,0,0.460511024178389,0.137836572484531,0.107420244868274,0,0.340906509664404,0.712256285173899,0.330569830721956,0.576570202095319,0.765676274967505,0.30347334256665,0.929691098594572,3.46293581513704,0,0,0,0,0,0.572499546967965,0,0,0.762520775695299,0,0,0,0.78494864019923,0.899362287916574,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,1.05650146756755,0.272999822815972,0.989838023675989,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,1.17898849215745,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.432807638929335,0,0.637705090915289,0,0.383010740264733,0.211673582723883,0,0.280797178113459,0,0,0,0.50787533340481,0.1605880751037,0,0,0.343505344755765,0.921722292925374,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0.422008249231538,0.111308705022906,0.329607748453519,0,0.398495976502139,0,0.251932747854276,0,0.123084805461069,0.933118762985422,0.0898683511473268,0,0,0.394573622547734,0,0,1.93866549219044,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0.241192877250816,3.05163472634166,0.221158519862449,0.591095237907095,1.75508317723178,0.435753854075961,0.139423744278603,0.076950258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| ||
|short_description=p2@LMBRD2 | |||
}} | }} |
Latest revision as of 18:57, 17 September 2015
Short description: | p2@LMBRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMBRD2_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 56bp_to_ENST00000546130_5end |
EntrezGene: | LMBRD2 |
HGNC: | 25287 |
UniProt: | B4DTZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data