FFCP PHASE1:Hg19::chr5:36608367..36608383,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:36608367..36608383,+ to FFCP PHASE1:Hg19::chr5:36608367..36608383,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6507 | |EntrezGene=6507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10941 | |HGNC=10941 | ||
|TSSclassifier=strong | |||
|UniProt=Q4JCQ8 | |UniProt=Q4JCQ8 | ||
|association_with_transcript=-47bp_to_ENST00000381918,NM_001166695,uc010iuy.2_5end | |||
|cluster_id=chr5:36608367..36608383,+ | |||
|coexpression_cluster_id=C1961 | |||
|description=CAGE_peak_3_at_SLC1A3_5end | |||
|id=chr5:36608367..36608383,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.01e-08;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.58e-16;82!UBERON:0006215;1.53e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.80e-74!57;UBERON:0005068!8.80e-74!57;UBERON:0006241!8.80e-74!57;UBERON:0007135!8.80e-74!57;UBERON:0001017!9.96e-72!82;UBERON:0005743!5.39e-70!86;UBERON:0002616!3.69e-67!59;UBERON:0000073!9.29e-66!94;UBERON:0001016!9.29e-66!94;UBERON:0000955!5.15e-62!69;UBERON:0006238!5.15e-62!69;UBERON:0003075!3.16e-60!86;UBERON:0007284!3.16e-60!86;UBERON:0002346!9.88e-57!90;UBERON:0002780!6.94e-53!41;UBERON:0001890!6.94e-53!41;UBERON:0006240!6.94e-53!41;UBERON:0003080!2.35e-51!42;UBERON:0001893!1.30e-48!34;UBERON:0002020!2.12e-48!34;UBERON:0003528!2.12e-48!34;UBERON:0002791!6.17e-47!33;UBERON:0001869!2.03e-45!32;UBERON:0000033!3.48e-42!123;UBERON:0003056!4.05e-42!61;UBERON:0000153!2.37e-39!129;UBERON:0007811!2.37e-39!129;UBERON:0004121!5.00e-38!169;UBERON:0007023!4.73e-37!115;UBERON:0000924!1.15e-36!173;UBERON:0006601!1.15e-36!173;UBERON:0000956!2.86e-34!25;UBERON:0000203!2.86e-34!25;UBERON:0002619!1.30e-29!22;UBERON:0001950!5.03e-26!20;UBERON:0003076!1.11e-22!15;UBERON:0003057!1.11e-22!15;UBERON:0004733!5.20e-18!12;UBERON:0002028!5.20e-18!12;UBERON:0007277!5.20e-18!12;UBERON:0004732!2.20e-16!13;UBERON:0002420!8.85e-16!9;UBERON:0007245!8.85e-16!9;UBERON:0010009!8.85e-16!9;UBERON:0010011!8.85e-16!9;UBERON:0000454!8.85e-16!9;UBERON:0002308!1.98e-15!9;UBERON:0000125!1.98e-15!9;UBERON:0000025!4.24e-15!194;UBERON:0002680!1.12e-12!9;UBERON:0001895!1.12e-12!9;UBERON:0010092!1.12e-12!9;UBERON:0009663!2.53e-12!7;UBERON:0000064!3.11e-12!219;UBERON:0000200!1.34e-11!6;UBERON:0002298!2.93e-11!8;UBERON:0004111!7.12e-11!241;UBERON:0000477!7.45e-11!286;UBERON:0000349!1.94e-10!5;UBERON:0000119!3.70e-10!312;UBERON:0000483!6.26e-10!309;UBERON:0000475!8.55e-10!365;UBERON:0002021!2.98e-09!5;UBERON:0001871!1.78e-08!7;UBERON:0002037!3.82e-08!6;UBERON:0006215!3.82e-08!6;UBERON:0000369!6.91e-08!4;UBERON:0002435!6.91e-08!4;UBERON:0000204!6.91e-08!4;UBERON:0010082!6.91e-08!4;UBERON:0000062!2.92e-07!511;UBERON:0000467!3.57e-07!625;UBERON:0001896!4.02e-07!3;UBERON:0005290!4.02e-07!3;UBERON:0010096!4.02e-07!3;UBERON:0000480!4.03e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.33e-63;32!UBERON:0001893;3.58e-63;34!UBERON:0003528;1.92e-61;34!UBERON:0002020;1.92e-61;34!UBERON:0002791;2.63e-59;32!UBERON:0000956;1.49e-55;25!UBERON:0000203;1.49e-55;25!UBERON:0000073;4.23e-55;53!UBERON:0002616;4.23e-55;53!UBERON:0002619;9.02e-52;22!UBERON:0002780;1.60e-50;41!UBERON:0001890;1.60e-50;41!UBERON:0001950;6.50e-45;20!UBERON:0001017;2.02e-39;75!UBERON:0000955;1.44e-37;68!UBERON:0001016;1.20e-29;83!UBERON:0004733;1.72e-23;12!UBERON:0002028;1.72e-23;12!UBERON:0004732;1.52e-21;13!UBERON:0002298;3.91e-21;6!UBERON:0000200;9.39e-21;6!UBERON:0000349;1.79e-18;5!UBERON:0002420;5.52e-18;9!UBERON:0007245;5.52e-18;9!UBERON:0010009;5.52e-18;9!UBERON:0010011;5.52e-18;9!UBERON:0000454;5.52e-18;9!UBERON:0000125;1.30e-17;9!UBERON:0002308;1.30e-17;9!UBERON:0002680;5.00e-14;9!UBERON:0001895;5.00e-14;9!UBERON:0007023;1.66e-13;114!UBERON:0001871;1.09e-12;6!UBERON:0011216;1.33e-12;132!UBERON:0001896;2.78e-12;3!UBERON:0005290;2.78e-12;3!UBERON:0009663;5.31e-12;7!UBERON:0001872;1.25e-11;5!UBERON:0002021;2.03e-11;5!UBERON:0001870;2.44e-11;3!UBERON:0000988;1.27e-10;3!UBERON:0001954;7.94e-09;2!UBERON:0003022;7.94e-09;2!UBERON:0002421;7.94e-09;2!UBERON:0002600;7.94e-09;2!UBERON:0000369;2.85e-08;4!UBERON:0002435;2.85e-08;4!UBERON:0000204;2.85e-08;4!UBERON:0002771;3.20e-08;2!UBERON:0001876;3.20e-08;2!UBERON:0002784;4.44e-08;4!UBERON:0002702;5.97e-08;2!UBERON:0001897;1.01e-07;2!UBERON:0002148;1.01e-07;2!UBERON:0001875;1.01e-07;2!UBERON:0006331;1.01e-07;2!UBERON:0009662;1.01e-07;2!UBERON:0006514;1.01e-07;2!UBERON:0010225;1.01e-07;2!UBERON:0010314;2.43e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.62e-101,56;UBERON:0005068,3.62e-101,56;UBERON:0006241,3.62e-101,56;UBERON:0007135,3.62e-101,56;UBERON:0001017,5.69e-97,81;UBERON:0000073,8.20e-97,53;UBERON:0002616,8.20e-97,53;UBERON:0000955,1.41e-88,68;UBERON:0006238,1.41e-88,68;UBERON:0001016,2.05e-86,89;UBERON:0002780,2.58e-73,41;UBERON:0001890,2.58e-73,41;UBERON:0003080,2.58e-73,41;UBERON:0006240,2.58e-73,41;UBERON:0003075,4.17e-73,82;UBERON:0007284,4.17e-73,82;UBERON:0001893,6.12e-73,34;UBERON:0003528,1.43e-72,34;UBERON:0002020,1.43e-72,34;UBERON:0001869,5.42e-72,32;UBERON:0002346,2.87e-69,86;UBERON:0002791,1.54e-66,32;UBERON:0000956,6.03e-56,25;UBERON:0000203,6.03e-56,25;UBERON:0010371,1.30e-55,104;UBERON:0003056,1.27e-53,61;UBERON:0002619,3.64e-52,22;UBERON:0007023,1.01e-45,114;UBERON:0001950,2.77e-45,20;UBERON:0004121,2.40e-44,171;UBERON:0000924,2.40e-44,171;UBERON:0006601,2.40e-44,171;UBERON:0010314,5.10e-44,132;UBERON:0011216,1.44e-31,223;UBERON:0003076,2.18e-27,15;UBERON:0003057,2.18e-27,15;UBERON:0000025,3.25e-24,192;UBERON:0004733,1.71e-23,12;UBERON:0002028,1.71e-23,12;UBERON:0007277,1.71e-23,12;UBERON:0004732,1.50e-21,13;UBERON:0002298,3.85e-21,6;UBERON:0000200,6.31e-21,6;UBERON:0000349,1.11e-18,5;UBERON:0002420,3.48e-18,9;UBERON:0007245,3.48e-18,9;UBERON:0010009,3.48e-18,9;UBERON:0010011,3.48e-18,9;UBERON:0000454,3.48e-18,9;UBERON:0000125,1.17e-17,9;UBERON:0002308,1.17e-17,9;UBERON:0004111,2.29e-17,240;UBERON:0002680,5.08e-14,9;UBERON:0001895,5.08e-14,9;UBERON:0010092,5.08e-14,9;UBERON:0000483,5.31e-14,306;UBERON:0000119,9.17e-14,309;UBERON:0001871,7.26e-13,6;UBERON:0001896,2.69e-12,3;UBERON:0005290,2.69e-12,3;UBERON:0010096,2.69e-12,3;UBERON:0009663,4.77e-12,7;UBERON:0001872,7.36e-12,5;UBERON:0001870,1.98e-11,3;UBERON:0002021,2.64e-11,5;UBERON:0000988,1.29e-10,3;UBERON:0001954,7.66e-09,2;UBERON:0003022,7.66e-09,2;UBERON:0002421,7.66e-09,2;UBERON:0002600,7.66e-09,2;UBERON:0001876,2.00e-08,2;UBERON:0000369,2.10e-08,4;UBERON:0002435,2.10e-08,4;UBERON:0000204,2.10e-08,4;UBERON:0010082,2.10e-08,4;UBERON:0002771,2.99e-08,2;UBERON:0000923,3.47e-08,560;UBERON:0010316,3.47e-08,560;UBERON:0005291,3.47e-08,560;UBERON:0006598,3.47e-08,560;UBERON:0010317,3.47e-08,560;UBERON:0002532,3.47e-08,560;UBERON:0002050,4.82e-08,564;UBERON:0002702,5.29e-08,2;UBERON:0002784,5.50e-08,4;UBERON:0000922,9.73e-08,592;UBERON:0002148,1.03e-07,2;UBERON:0006331,1.03e-07,2;UBERON:0009662,1.03e-07,2;UBERON:0001897,1.06e-07,2;UBERON:0010225,1.06e-07,2;UBERON:0001875,1.31e-07,2;UBERON:0006514,1.31e-07,2;UBERON:0005423,1.85e-07,581 | |||
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| ||
|short_description=p3@SLC1A3 | |||
}} | }} |
Latest revision as of 19:22, 17 September 2015
Short description: | p3@SLC1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC1A3_5end |
Coexpression cluster: | C1961_Neural_cerebellum_medulla_mesothelioma_hippocampus_spinal_Astrocyte |
Association with transcript: | -47bp_to_ENST00000381918, NM_001166695, uc010iuy.2_5end |
EntrezGene: | SLC1A3 |
HGNC: | 10941 |
UniProt: | Q4JCQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data