FFCP PHASE1:Hg19::chr5:57878034..57878045,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:57878034..57878045,+ to FFCP PHASE1:Hg19::chr5:57878034..57878045,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115827 | |EntrezGene=115827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30269 | |HGNC=30269 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000513316_5end | |||
|cluster_id=chr5:57878034..57878045,+ | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_9_at_RAB3C_5end | |||
|id=chr5:57878034..57878045,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.77e-14;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.21e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;1.01e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.01e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.51e-48!57;UBERON:0005068!3.51e-48!57;UBERON:0006241!3.51e-48!57;UBERON:0007135!3.51e-48!57;UBERON:0001017!8.34e-42!82;UBERON:0005743!1.38e-41!86;UBERON:0002616!3.40e-40!59;UBERON:0002780!4.72e-39!41;UBERON:0001890!4.72e-39!41;UBERON:0006240!4.72e-39!41;UBERON:0000073!7.83e-39!94;UBERON:0001016!7.83e-39!94;UBERON:0003080!5.71e-38!42;UBERON:0002020!1.45e-37!34;UBERON:0003528!1.45e-37!34;UBERON:0001893!5.08e-37!34;UBERON:0001869!4.18e-36!32;UBERON:0007023!1.00e-35!115;UBERON:0002791!6.19e-35!33;UBERON:0000955!6.51e-35!69;UBERON:0006238!6.51e-35!69;UBERON:0003075!5.62e-33!86;UBERON:0007284!5.62e-33!86;UBERON:0002619!1.90e-31!22;UBERON:0002346!4.35e-31!90;UBERON:0000956!2.77e-27!25;UBERON:0000203!2.77e-27!25;UBERON:0001950!1.33e-26!20;UBERON:0003056!4.67e-26!61;UBERON:0000033!2.39e-18!123;UBERON:0004121!4.03e-17!169;UBERON:0000153!4.38e-17!129;UBERON:0007811!4.38e-17!129;UBERON:0000924!1.72e-16!173;UBERON:0006601!1.72e-16!173;UBERON:0000200!1.13e-11!6;UBERON:0002308!1.24e-11!9;UBERON:0000125!1.24e-11!9;UBERON:0003076!3.91e-11!15;UBERON:0003057!3.91e-11!15;UBERON:0000025!2.38e-10!194;UBERON:0000988!1.10e-09!3;UBERON:0001872!1.73e-09!5;UBERON:0000349!2.11e-09!5;UBERON:0002298!5.04e-09!8;UBERON:0002021!7.25e-09!5;UBERON:0004111!1.82e-08!241;UBERON:0004733!5.07e-08!12;UBERON:0002028!5.07e-08!12;UBERON:0007277!5.07e-08!12;UBERON:0002420!5.18e-08!9;UBERON:0007245!5.18e-08!9;UBERON:0010009!5.18e-08!9;UBERON:0010011!5.18e-08!9;UBERON:0000454!5.18e-08!9;UBERON:0004732!2.40e-07!13;UBERON:0000477!2.48e-07!286;UBERON:0002148!2.99e-07!2;UBERON:0009662!2.99e-07!2;UBERON:0000369!3.38e-07!4;UBERON:0002435!3.38e-07!4;UBERON:0000204!3.38e-07!4;UBERON:0010082!3.38e-07!4;UBERON:0009663!5.26e-07!7;UBERON:0001954!5.38e-07!2;UBERON:0003022!5.38e-07!2;UBERON:0002421!5.38e-07!2;UBERON:0002600!5.38e-07!2;UBERON:0001870!5.71e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;3.17e-25;9!UBERON:0002308;3.17e-25;9!UBERON:0009663;4.69e-15;7!UBERON:0001954;7.77e-14;2!UBERON:0003022;7.77e-14;2!UBERON:0002421;7.77e-14;2!UBERON:0002600;7.77e-14;2!UBERON:0001873;1.21e-13;2!UBERON:0002148;1.21e-13;2!UBERON:0001875;1.21e-13;2!UBERON:0006331;1.21e-13;2!UBERON:0009662;1.21e-13;2!UBERON:0006514;1.21e-13;2!UBERON:0002420;6.16e-12;9!UBERON:0007245;6.16e-12;9!UBERON:0010009;6.16e-12;9!UBERON:0010011;6.16e-12;9!UBERON:0000454;6.16e-12;9!UBERON:0003528;2.04e-11;34!UBERON:0002020;2.04e-11;34!UBERON:0000988;1.53e-09;3!UBERON:0005383;1.53e-09;3!UBERON:0005382;1.53e-09;3!UBERON:0000369;1.80e-07;4!UBERON:0002435;1.80e-07;4!UBERON:0000204;1.80e-07;4!UBERON:0002791;2.53e-07;32!UBERON:0001869;2.53e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,3.44e-25,9;UBERON:0002308,3.44e-25,9;UBERON:0009663,5.41e-15,7;UBERON:0001954,8.28e-14,2;UBERON:0003022,8.28e-14,2;UBERON:0002421,8.28e-14,2;UBERON:0002600,8.28e-14,2;UBERON:0002148,1.07e-13,2;UBERON:0006331,1.07e-13,2;UBERON:0009662,1.07e-13,2;UBERON:0001873,1.21e-13,2;UBERON:0010122,1.21e-13,2;UBERON:0001875,1.55e-13,2;UBERON:0006514,1.55e-13,2;UBERON:0002420,6.88e-12,9;UBERON:0007245,6.88e-12,9;UBERON:0010009,6.88e-12,9;UBERON:0010011,6.88e-12,9;UBERON:0000454,6.88e-12,9;UBERON:0003528,9.91e-12,34;UBERON:0002020,9.91e-12,34;UBERON:0000988,1.41e-09,3;UBERON:0005383,1.54e-09,3;UBERON:0005382,1.54e-09,3;UBERON:0000073,9.60e-08,53;UBERON:0002616,9.60e-08,53;UBERON:0001017,1.09e-07,81;UBERON:0000369,1.80e-07,4;UBERON:0002435,1.80e-07,4;UBERON:0000204,1.80e-07,4;UBERON:0010082,1.80e-07,4;UBERON:0002791,2.12e-07,32;UBERON:0001869,2.12e-07,32;UBERON:0001049,2.35e-07,56;UBERON:0005068,2.35e-07,56;UBERON:0006241,2.35e-07,56;UBERON:0007135,2.35e-07,56;UBERON:0001893,5.19e-07,34;UBERON:0001016,5.97e-07,89 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0.343505344755765,0,0,0,0,0,0,1.89318974933188,0,1.4098700508785,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,1.77148277162768,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.702793337176017,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.272406812223151,0.160753148465019,0,0.415440338029185,0,0,0.425246896606173,0,0,0,0,6.99220623398095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.85125642439766,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,0.250381861413,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.41023272848151,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0.826747186004736,0.317079050969534,0.546974809018219,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.271878931907327,0.131545547125698,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0.467878926924211,0,0,0,0,0,0,0.437119121007915,0,0,0,0.981542335574726,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0.343505344755765,0,0,0,0,0,0,1.89318974933188,0,1.4098700508785,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,1.77148277162768,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.702793337176017,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.272406812223151,0.160753148465019,0,0.415440338029185,0,0,0.425246896606173,0,0,0,0,6.99220623398095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,1.85125642439766,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,0.250381861413,0,0.332787154610557,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.41023272848151,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0.826747186004736,0.317079050969534,0.546974809018219,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.271878931907327,0.131545547125698,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0.467878926924211,0,0,0,0,0,0,0.437119121007915,0,0,0,0.981542335574726,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@RAB3C | |||
}} | }} |
Latest revision as of 06:28, 18 September 2015
Short description: | p9@RAB3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RAB3C_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | -2bp_to_ENST00000513316_5end |
EntrezGene: | RAB3C |
HGNC: | 30269 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.01e-09 | 3 |