FFCP PHASE1:Hg19::chr6:138192205..138192214,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:138192205..138192214,+ to FFCP PHASE1:Hg19::chr6:138192205..138192214,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7128 | |EntrezGene=7128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11896 | |HGNC=11896 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7A9,F5GYN2,F5H1G3 | |UniProt=F5H7A9,F5GYN2,F5H1G3 | ||
|association_with_transcript=-133bp_to_ENST00000535332,ENST00000535574,ENST00000539356_5end | |||
|cluster_id=chr6:138192205..138192214,+ | |||
|coexpression_cluster_id=C817 | |||
|description=CAGE_peak_15_at_TNFAIP3_5end | |||
|id=chr6:138192205..138192214,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.66e-39!140;CL:0000988!8.75e-29!182;CL:0000037!3.51e-28!172;CL:0000566!3.51e-28!172;CL:0002087!5.54e-27!119;CL:0002031!1.40e-25!124;CL:0002032!1.80e-25!165;CL:0000837!1.80e-25!165;CL:0000766!2.00e-22!76;CL:0002057!3.04e-17!42;CL:0000557!8.88e-17!71;CL:0000839!4.72e-16!70;CL:0002009!1.07e-15!65;CL:0000860!1.68e-15!45;CL:0002194!2.25e-15!63;CL:0000576!2.25e-15!63;CL:0000040!2.25e-15!63;CL:0000559!2.25e-15!63;CL:0000763!3.03e-15!112;CL:0000049!3.03e-15!112;CL:0000048!5.06e-14!430;CL:0000723!6.97e-14!436;CL:0000034!1.15e-13!444;CL:0000134!1.50e-12!358;CL:0002320!8.47e-12!365;CL:0000451!1.61e-10!10;CL:0000542!5.98e-10!53;CL:0000051!5.98e-10!53;CL:0000219!1.21e-09!390;CL:0000838!2.05e-09!52;CL:0000990!1.36e-08!8;CL:0000094!3.24e-08!8;CL:0000080!3.55e-08!6;CL:0000081!1.67e-07!11;CL:0002371!5.73e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-24;33!CL:0002057;1.24e-24;33!CL:0000473;2.00e-22;39!CL:0000234;2.00e-22;39!CL:0000766;7.94e-13;69!CL:0000576;3.75e-12;48!CL:0000081;3.29e-11;11!CL:0002087;7.80e-11;104!CL:0000094;4.97e-10;8!CL:0000453;2.98e-09;5!CL:0000763;5.04e-09;100!CL:0000738;2.24e-08;136!CL:0000775;1.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.09e-30,136;CL:0000473,7.48e-30,48;CL:0000234,7.48e-30,48;CL:0000766,3.44e-28,72;CL:0000860,2.35e-27,42;CL:0002057,2.35e-27,42;CL:0000988,3.31e-27,177;CL:0002032,1.60e-24,161;CL:0000837,1.60e-24,161;CL:0000037,3.18e-23,168;CL:0002194,4.75e-23,59;CL:0000576,4.75e-23,59;CL:0000040,4.75e-23,59;CL:0000559,4.75e-23,59;CL:0000763,6.40e-23,108;CL:0000049,6.40e-23,108;CL:0002009,3.58e-22,61;CL:0002087,4.29e-21,115;CL:0000839,3.30e-20,66;CL:0002031,5.46e-20,120;CL:0000557,7.51e-20,67;CL:0000081,2.89e-11,11;CL:0000094,4.31e-10,8;CL:0000134,6.64e-10,354;CL:0002320,1.43e-09,361;CL:0000453,3.55e-09,5;CL:0000034,1.11e-08,441;CL:0000048,1.92e-08,427;CL:0000219,2.11e-08,386;CL:0000723,3.21e-08,433;CL:0000775,1.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.83e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.24e-18!102;UBERON:0003061!1.24e-18!102;UBERON:0002193!2.88e-18!112;UBERON:0002371!1.52e-14!80;UBERON:0002405!1.88e-13!115;UBERON:0001474!9.84e-13!86;UBERON:0003081!5.66e-11!216;UBERON:0002384!8.69e-11!375;UBERON:0004765!7.79e-10!101;UBERON:0001434!7.79e-10!101;UBERON:0002204!2.14e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.01e-17,98;UBERON:0003061,1.01e-17,98;UBERON:0002371,4.75e-17,76;UBERON:0002193,1.18e-15,108;UBERON:0001474,1.60e-15,82;UBERON:0004765,8.45e-14,90;UBERON:0002405,3.13e-13,93;UBERON:0001434,4.92e-12,100;UBERON:0002384,4.04e-09,371;UBERON:0003081,8.64e-09,203;UBERON:0002204,2.07e-07,167 | |||
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| ||
|short_description=p15@TNFAIP3 | |||
}} | }} |
Latest revision as of 03:24, 25 September 2015
Short description: | p15@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TNFAIP3_5end |
Coexpression cluster: | C817_cord_CD14_mycosis_xeroderma_migratory_B_hairy |
Association with transcript: | -133bp_to_ENST00000535332, ENST00000535574, ENST00000539356_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | F5H7A9F5GYN2F5H1G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.09e-30 | 136 |
defensive cell | 7.48e-30 | 48 |
phagocyte | 7.48e-30 | 48 |
myeloid leukocyte | 3.44e-28 | 72 |
classical monocyte | 2.35e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.35e-27 | 42 |
hematopoietic cell | 3.31e-27 | 177 |
hematopoietic oligopotent progenitor cell | 1.60e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-24 | 161 |
hematopoietic stem cell | 3.18e-23 | 168 |
monopoietic cell | 4.75e-23 | 59 |
monocyte | 4.75e-23 | 59 |
monoblast | 4.75e-23 | 59 |
promonocyte | 4.75e-23 | 59 |
myeloid cell | 6.40e-23 | 108 |
common myeloid progenitor | 6.40e-23 | 108 |
macrophage dendritic cell progenitor | 3.58e-22 | 61 |
nongranular leukocyte | 4.29e-21 | 115 |
myeloid lineage restricted progenitor cell | 3.30e-20 | 66 |
hematopoietic lineage restricted progenitor cell | 5.46e-20 | 120 |
granulocyte monocyte progenitor cell | 7.51e-20 | 67 |
blood cell | 2.89e-11 | 11 |
granulocyte | 4.31e-10 | 8 |
mesenchymal cell | 6.64e-10 | 354 |
connective tissue cell | 1.43e-09 | 361 |
Langerhans cell | 3.55e-09 | 5 |
stem cell | 1.11e-08 | 441 |
multi fate stem cell | 1.92e-08 | 427 |
motile cell | 2.11e-08 | 386 |
somatic stem cell | 3.21e-08 | 433 |
neutrophil | 1.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.01e-17 | 98 |
blood island | 1.01e-17 | 98 |
bone marrow | 4.75e-17 | 76 |
hemolymphoid system | 1.18e-15 | 108 |
bone element | 1.60e-15 | 82 |
skeletal element | 8.45e-14 | 90 |
immune system | 3.13e-13 | 93 |
skeletal system | 4.92e-12 | 100 |
connective tissue | 4.04e-09 | 371 |
lateral plate mesoderm | 8.64e-09 | 203 |
musculoskeletal system | 2.07e-07 | 167 |