FFCP PHASE1:Hg19::chr6:138866823..138866851,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:138866823..138866851,- to FFCP PHASE1:Hg19::chr6:138866823..138866851,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57224 | |EntrezGene=57224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |HGNC=21021 | ||
|TSSclassifier=strong | |||
|UniProt=E9PAK2 | |UniProt=E9PAK2 | ||
|association_with_transcript=0bp_to_ENST00000342260_5end | |||
|cluster_id=chr6:138866823..138866851,- | |||
|coexpression_cluster_id=C4565 | |||
|description=CAGE_peak_3_at_NHSL1_5end | |||
|id=chr6:138866823..138866851,- | |||
|ontology_enrichment_celltype=CL:0000222!2.17e-24!119;CL:0002139!2.31e-17!24;CL:0000115!7.04e-17!35;CL:0002078!1.76e-16!44;CL:0000055!2.42e-16!180;CL:0000213!1.59e-14!57;CL:0000215!1.59e-14!57;CL:0000071!4.85e-13!18;CL:0002546!4.85e-13!18;CL:0000183!4.71e-12!59;CL:0000187!1.47e-11!54;CL:0000680!3.01e-11!57;CL:0000056!3.01e-11!57;CL:0000355!3.01e-11!57;CL:0000393!6.42e-11!60;CL:0000211!6.42e-11!60;CL:0000220!6.88e-11!246;CL:0002321!1.84e-10!248;CL:0000192!1.86e-08!42;CL:0000514!1.86e-08!42;CL:0000057!8.25e-08!75;CL:0000359!1.48e-07!32;CL:1000413!3.97e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.57e-21;24!CL:0000115;9.68e-19;36!CL:0000071;8.44e-16;18!CL:0002078;3.37e-14;45!CL:0000213;8.61e-12;58!CL:0000215;8.61e-12;58!CL:1000413;1.83e-08;9!CL:0000187;5.16e-07;55!CL:0002138;6.07e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.38e-28,121;CL:0000115,2.21e-22,36;CL:0002139,3.74e-21,24;CL:0002078,5.16e-21,45;CL:0000213,3.60e-19,58;CL:0000215,3.60e-19,58;CL:0000071,8.63e-16,18;CL:0002546,8.63e-16,18;CL:0000187,2.62e-11,55;CL:0002321,3.35e-11,250;CL:0000680,1.12e-10,58;CL:0000056,1.12e-10,58;CL:0000355,1.12e-10,58;CL:0000393,1.75e-09,61;CL:0000211,1.75e-09,61;CL:1000413,1.82e-08,9;CL:0000192,1.44e-07,43;CL:0000514,1.44e-07,43;CL:0005020,6.23e-07,6;CL:0002138,6.23e-07,6;CL:0005022,6.23e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;8.44e-16;18!CL:0000222;6.09e-09;121!CL:0005022;6.07e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.26e-32!79;UBERON:0007798!1.26e-32!79;UBERON:0001009!1.56e-29!113;UBERON:0004535!1.09e-27!110;UBERON:0000055!2.40e-26!69;UBERON:0004872!1.21e-24!84;UBERON:0000119!1.45e-22!312;UBERON:0001981!2.37e-22!60;UBERON:0007500!2.37e-22!60;UBERON:0004537!2.37e-22!60;UBERON:0006965!2.37e-22!60;UBERON:0003914!4.17e-22!118;UBERON:0000483!4.63e-21!309;UBERON:0000025!2.87e-17!194;UBERON:0000490!7.08e-17!138;UBERON:0000477!1.06e-16!286;UBERON:0004111!3.39e-15!241;UBERON:0002385!2.33e-13!63;UBERON:0001015!2.33e-13!63;UBERON:0000383!2.33e-13!63;UBERON:0001986!4.85e-13!18;UBERON:0004638!4.85e-13!18;UBERON:0004852!4.85e-13!18;UBERON:0001637!6.04e-13!42;UBERON:0003509!6.04e-13!42;UBERON:0004572!6.04e-13!42;UBERON:0001134!8.03e-13!61;UBERON:0002036!8.03e-13!61;UBERON:0003082!8.03e-13!61;UBERON:0004290!1.71e-12!70;UBERON:0000914!2.46e-11!83;UBERON:0002329!2.46e-11!83;UBERON:0003077!2.46e-11!83;UBERON:0003059!2.46e-11!83;UBERON:0007282!2.46e-11!83;UBERON:0009618!2.46e-11!83;UBERON:0007285!2.46e-11!83;UBERON:0007100!3.90e-11!27;UBERON:0006914!5.79e-11!25;UBERON:0000468!1.07e-10!659;UBERON:0000487!1.14e-10!22;UBERON:0004573!2.30e-10!33;UBERON:0004571!2.30e-10!33;UBERON:0000481!2.43e-10!347;UBERON:0000475!3.02e-10!365;UBERON:0000947!3.34e-10!21;UBERON:0010191!3.34e-10!21;UBERON:0005256!2.23e-09!143;UBERON:0000948!2.51e-09!24;UBERON:0005498!2.51e-09!24;UBERON:0004140!2.51e-09!24;UBERON:0009881!2.51e-09!24;UBERON:0004141!2.51e-09!24;UBERON:0003084!2.51e-09!24;UBERON:0007005!2.51e-09!24;UBERON:0004139!2.51e-09!24;UBERON:0004291!2.51e-09!24;UBERON:0000486!3.23e-09!82;UBERON:0000467!1.85e-08!625;UBERON:0000480!2.62e-08!626;UBERON:0002100!2.06e-07!216;UBERON:0003915!3.97e-07!9;UBERON:0004700!3.97e-07!9;UBERON:0001917!3.97e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.44e-16;18!UBERON:0001986;8.44e-16;18!UBERON:0004852;8.44e-16;18!UBERON:0006914;3.91e-13;25!UBERON:0002049;5.83e-13;75!UBERON:0007798;5.83e-13;75!UBERON:0000055;8.41e-13;65!UBERON:0000487;1.52e-12;22!UBERON:0007500;6.42e-12;56!UBERON:0001981;6.42e-12;56!UBERON:0004537;6.42e-12;56!UBERON:0000947;2.31e-11;21!UBERON:0010191;2.31e-11;21!UBERON:0007100;3.52e-11;25!UBERON:0002385;1.32e-10;31!UBERON:0001015;1.32e-10;31!UBERON:0000383;1.32e-10;31!UBERON:0001009;1.63e-10;112!UBERON:0001637;5.66e-10;42!UBERON:0003509;5.66e-10;42!UBERON:0004572;5.66e-10;42!UBERON:0004535;5.82e-10;109!UBERON:0004573;8.38e-10;33!UBERON:0004571;8.38e-10;33!UBERON:0000490;1.74e-09;33!UBERON:0000948;5.06e-09;22!UBERON:0003915;1.83e-08;9!UBERON:0004700;1.83e-08;9!UBERON:0001917;1.83e-08;9!UBERON:0001473;1.40e-07;8!UBERON:0004536;1.40e-07;8!UBERON:0006558;1.40e-07;8!UBERON:0006876;1.64e-07;11!UBERON:0003914;4.31e-07;74!UBERON:0001638;7.20e-07;9!UBERON:0003920;7.20e-07;9!UBERON:0004582;7.20e-07;9!UBERON:0001032;8.48e-07;24!UBERON:0004456;8.48e-07;24 | |||
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| ||
|short_description=p3@NHSL1 | |||
}} | }} |
Latest revision as of 05:06, 25 September 2015
Short description: | p3@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NHSL1_5end |
Coexpression cluster: | C4565_heart_Meningeal_Endothelial_mesothelioma_Lymphatic_Renal_skeletal |
Association with transcript: | 0bp_to_ENST00000342260_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | E9PAK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.38e-28 | 121 |
endothelial cell | 2.21e-22 | 36 |
endothelial cell of vascular tree | 3.74e-21 | 24 |
meso-epithelial cell | 5.16e-21 | 45 |
lining cell | 3.60e-19 | 58 |
barrier cell | 3.60e-19 | 58 |
blood vessel endothelial cell | 8.63e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.63e-16 | 18 |
muscle cell | 2.62e-11 | 55 |
embryonic cell | 3.35e-11 | 250 |
muscle precursor cell | 1.12e-10 | 58 |
myoblast | 1.12e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.12e-10 | 58 |
electrically responsive cell | 1.75e-09 | 61 |
electrically active cell | 1.75e-09 | 61 |
endothelial cell of artery | 1.82e-08 | 9 |
smooth muscle cell | 1.44e-07 | 43 |
smooth muscle myoblast | 1.44e-07 | 43 |
lymphangioblast | 6.23e-07 | 6 |
endothelial cell of lymphatic vessel | 6.23e-07 | 6 |
vascular lymphangioblast | 6.23e-07 | 6 |