FFCP PHASE1:Hg19::chr6:149806091..149806098,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:149806091..149806098,- to FFCP PHASE1:Hg19::chr6:149806091..149806098,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=340152 | |EntrezGene=340152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21175 | |HGNC=21175 | ||
|TSSclassifier=strong | |||
|UniProt=B7WNU7,A2A288 | |UniProt=B7WNU7,A2A288 | ||
|association_with_transcript=27bp_to_ENST00000389942,ENST00000416573_5end | |||
|cluster_id=chr6:149806091..149806098,- | |||
|coexpression_cluster_id=C901 | |||
|description=CAGE_peak_7_at_ZC3H12D_5end | |||
|id=chr6:149806091..149806098,- | |||
|ontology_enrichment_celltype=CL:0000738!2.47e-50!140;CL:0000838!3.88e-50!52;CL:0000542!6.68e-49!53;CL:0000051!6.68e-49!53;CL:0002031!4.21e-46!124;CL:0000037!6.97e-46!172;CL:0000566!6.97e-46!172;CL:0002087!3.01e-45!119;CL:0002032!1.42e-44!165;CL:0000837!1.42e-44!165;CL:0000988!1.88e-44!182;CL:0000945!1.21e-24!24;CL:0000826!1.21e-24!24;CL:0000084!1.94e-22!25;CL:0000827!1.94e-22!25;CL:0000791!2.89e-22!18;CL:0000789!2.89e-22!18;CL:0002420!2.89e-22!18;CL:0002419!2.89e-22!18;CL:0000790!2.89e-22!18;CL:0000236!8.24e-18!14;CL:0000625!1.46e-14!11;CL:0000134!2.90e-12!358;CL:0002320!1.36e-11!365;CL:0000624!4.55e-11!6;CL:0000763!1.66e-09!112;CL:0000049!1.66e-09!112;CL:0000219!2.82e-09!390;CL:0000557!3.62e-08!71;CL:0000766!8.64e-08!76;CL:0002009!3.95e-07!65;CL:0000048!5.08e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.99e-37;18!CL:0000789;1.99e-37;18!CL:0002419;1.99e-37;18!CL:0000084;3.01e-26;25!CL:0000542;1.30e-21;53!CL:0000624;3.38e-21;6!CL:0000625;4.81e-21;11!CL:0000236;8.36e-18;13!CL:0000945;6.16e-12;24!CL:0001014;8.74e-12;2!CL:0001016;8.74e-12;2!CL:0000898;1.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.89e-37,18;CL:0000789,3.89e-37,18;CL:0002420,3.89e-37,18;CL:0002419,3.89e-37,18;CL:0000790,3.89e-37,18;CL:0000838,5.91e-37,52;CL:0000542,3.63e-36,53;CL:0000051,3.63e-36,53;CL:0000084,4.83e-26,25;CL:0000827,4.83e-26,25;CL:0000624,4.57e-21,6;CL:0000625,7.24e-21,11;CL:0000738,2.44e-20,136;CL:0002031,6.25e-20,120;CL:0002087,6.77e-19,115;CL:0000236,1.44e-16,14;CL:0000037,2.37e-15,168;CL:0002032,6.80e-15,161;CL:0000837,6.80e-15,161;CL:0000988,2.83e-14,177;CL:0000945,5.82e-12,24;CL:0000826,5.82e-12,24;CL:0001014,8.78e-12,2;CL:0001016,8.78e-12,2;CL:0000898,2.13e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.99e-37;18!CL:0000051;1.30e-21;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.87e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.30e-16!102;UBERON:0003061!4.30e-16!102;UBERON:0002193!1.41e-14!112;UBERON:0002384!3.38e-11!375;UBERON:0000178!2.06e-10!15;UBERON:0000179!2.06e-10!15;UBERON:0000463!2.06e-10!15;UBERON:0004177!6.10e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.738905305049512,0.314843125254717,0,0.767658796194425,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,0.553995408531877,0.601633342410425,0.217010870715852,0.671746422719773,0.32389366601898,0.515151135268373,0.872389432677388,0,0,0.697287110717054,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,3.51992488922645,0.546138611262131,0,1.70692089026603,1.60158394814405,1.72425731986345,1.32208974556972,3.81621501814146,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0,2.55722701147983,2.75107533924415,2.67281948699362,1.67186495390678,0.977766799900771,0,0,1.22551502573691,2.06224135232386,1.99380505125259,2.43723477388514,1.92136979588513,2.60118695119756,0.164437904603676,0,1.15921234294021,1.4828656316206,0.535081656179426,2.09071047609954,0.679856056185397,1.14966148080576,1.37450978193052,0.759059076058509,2.22995790026868,0,1.90090408889675,1.20460095262218,0.76791966692651,1.24930726552346,2.13099526839615,1.64225599384209,1.00803371612366,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0,0.594524649154913,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0.197030760201927,1.2937654491571,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,1.70894156152249,0,0.822724546172388,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0.684704037099577,0,0,0,0.1605880751037,0.403599414382095,0.851692475380653,0.343505344755765,0,0.894704431569664,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,1.65770349318689,0,0,1.23084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0.364909578431332,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0,0,5.84932118033901,4.6428117273477,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0.699588091474503,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.129177819672012,0.186224142887574,0,0,0,0,0,1.48174516632093,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.738905305049512,0.314843125254717,0,0.767658796194425,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,0.553995408531877,0.601633342410425,0.217010870715852,0.671746422719773,0.32389366601898,0.515151135268373,0.872389432677388,0,0,0.697287110717054,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,3.51992488922645,0.546138611262131,0,1.70692089026603,1.60158394814405,1.72425731986345,1.32208974556972,3.81621501814146,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0,2.55722701147983,2.75107533924415,2.67281948699362,1.67186495390678,0.977766799900771,0,0,1.22551502573691,2.06224135232386,1.99380505125259,2.43723477388514,1.92136979588513,2.60118695119756,0.164437904603676,0,1.15921234294021,1.4828656316206,0.535081656179426,2.09071047609954,0.679856056185397,1.14966148080576,1.37450978193052,0.759059076058509,2.22995790026868,0,1.90090408889675,1.20460095262218,0.76791966692651,1.24930726552346,2.13099526839615,1.64225599384209,1.00803371612366,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0,0.594524649154913,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0.197030760201927,1.2937654491571,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,1.70894156152249,0,0.822724546172388,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0.684704037099577,0,0,0,0.1605880751037,0.403599414382095,0.851692475380653,0.343505344755765,0,0.894704431569664,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,1.65770349318689,0,0,1.23084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0.364909578431332,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0,0,5.84932118033901,4.6428117273477,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.322289439867886,0.699588091474503,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.129177819672012,0.186224142887574,0,0,0,0,0,1.48174516632093,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p7@ZC3H12D | |||
}} | }} |
Latest revision as of 02:25, 16 September 2015
Short description: | p7@ZC3H12D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ZC3H12D_5end |
Coexpression cluster: | C901_immature_CD4_Natural_CD19_CD8_lymphoma_tonsil |
Association with transcript: | 27bp_to_ENST00000389942, ENST00000416573_5end |
EntrezGene: | ZC3H12D |
HGNC: | 21175 |
UniProt: | B7WNU7A2A288 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.89e-37 | 18 |
alpha-beta T cell | 3.89e-37 | 18 |
immature T cell | 3.89e-37 | 18 |
mature T cell | 3.89e-37 | 18 |
immature alpha-beta T cell | 3.89e-37 | 18 |
lymphoid lineage restricted progenitor cell | 5.91e-37 | 52 |
lymphocyte | 3.63e-36 | 53 |
common lymphoid progenitor | 3.63e-36 | 53 |
T cell | 4.83e-26 | 25 |
pro-T cell | 4.83e-26 | 25 |
CD4-positive, alpha-beta T cell | 4.57e-21 | 6 |
CD8-positive, alpha-beta T cell | 7.24e-21 | 11 |
leukocyte | 2.44e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 6.25e-20 | 120 |
nongranular leukocyte | 6.77e-19 | 115 |
B cell | 1.44e-16 | 14 |
hematopoietic stem cell | 2.37e-15 | 168 |
hematopoietic oligopotent progenitor cell | 6.80e-15 | 161 |
hematopoietic multipotent progenitor cell | 6.80e-15 | 161 |
hematopoietic cell | 2.83e-14 | 177 |
lymphocyte of B lineage | 5.82e-12 | 24 |
pro-B cell | 5.82e-12 | 24 |
CD1a-positive Langerhans cell | 8.78e-12 | 2 |
immature CD1a-positive Langerhans cell | 8.78e-12 | 2 |
naive T cell | 2.13e-07 | 3 |