FFCP PHASE1:Hg19::chr7:29234101..29234130,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:29234101..29234130,+ to FFCP PHASE1:Hg19::chr7:29234101..29234130,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWP4,A4D1A2,P52757 | |UniProt=F5GWP4,A4D1A2,P52757 | ||
|association_with_transcript=0bp_to_ENST00000435288,NM_004067,uc003szz.2,uc010kva.2,uc010kvb.2,uc010kvc.2,uc010kvd.2,uc011jzt.1_5end | |||
|cluster_id=chr7:29234101..29234130,+ | |||
|coexpression_cluster_id=C1458 | |||
|description=CAGE_peak_6_at_CHN2_5end | |||
|id=chr7:29234101..29234130,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.83e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.82e-12;82!UBERON:0006215;3.79e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.10e-38!115;UBERON:0001049!1.49e-30!57;UBERON:0005068!1.49e-30!57;UBERON:0006241!1.49e-30!57;UBERON:0007135!1.49e-30!57;UBERON:0001017!1.08e-26!82;UBERON:0000073!1.78e-25!94;UBERON:0001016!1.78e-25!94;UBERON:0002616!3.61e-25!59;UBERON:0005743!4.57e-25!86;UBERON:0003080!2.35e-24!42;UBERON:0002780!6.38e-24!41;UBERON:0001890!6.38e-24!41;UBERON:0006240!6.38e-24!41;UBERON:0000955!6.94e-23!69;UBERON:0006238!6.94e-23!69;UBERON:0001893!1.43e-21!34;UBERON:0002020!1.89e-21!34;UBERON:0003528!1.89e-21!34;UBERON:0002791!8.52e-21!33;UBERON:0002346!2.43e-20!90;UBERON:0001869!4.08e-20!32;UBERON:0003075!2.85e-18!86;UBERON:0007284!2.85e-18!86;UBERON:0002619!4.23e-16!22;UBERON:0000956!4.88e-15!25;UBERON:0000203!4.88e-15!25;UBERON:0001950!1.55e-14!20;UBERON:0003056!8.54e-14!61;UBERON:0000924!6.08e-12!173;UBERON:0006601!6.08e-12!173;UBERON:0000062!3.83e-11!511;UBERON:0004121!1.48e-10!169;UBERON:0000153!2.78e-09!129;UBERON:0007811!2.78e-09!129;UBERON:0000033!5.64e-09!123;UBERON:0000468!2.06e-08!659;UBERON:0002308!5.69e-08!9;UBERON:0000125!5.69e-08!9;UBERON:0003076!2.07e-07!15;UBERON:0003057!2.07e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.38e-33;34!UBERON:0003528;1.38e-32;34!UBERON:0002020;1.38e-32;34!UBERON:0001869;2.98e-32;32!UBERON:0002791;3.89e-32;32!UBERON:0002619;7.94e-31;22!UBERON:0002780;2.46e-29;41!UBERON:0001890;2.46e-29;41!UBERON:0000073;1.20e-28;53!UBERON:0002616;1.20e-28;53!UBERON:0001950;7.95e-28;20!UBERON:0000956;1.84e-26;25!UBERON:0000203;1.84e-26;25!UBERON:0001017;1.15e-19;75!UBERON:0001016;3.30e-19;83!UBERON:0000955;1.17e-18;68!UBERON:0000125;6.24e-14;9!UBERON:0002308;6.24e-14;9!UBERON:0004732;3.59e-12;13!UBERON:0009663;2.69e-11;7!UBERON:0002420;4.06e-11;9!UBERON:0007245;4.06e-11;9!UBERON:0010009;4.06e-11;9!UBERON:0010011;4.06e-11;9!UBERON:0000454;4.06e-11;9!UBERON:0004733;1.34e-10;12!UBERON:0002028;1.34e-10;12!UBERON:0000200;2.43e-10;6!UBERON:0001872;1.17e-09;5!UBERON:0002021;1.39e-09;5!UBERON:0002298;1.93e-09;6!UBERON:0007023;2.61e-09;114!UBERON:0011216;1.85e-08;132!UBERON:0000369;3.30e-07;4!UBERON:0002435;3.30e-07;4!UBERON:0000204;3.30e-07;4!UBERON:0002680;5.54e-07;9!UBERON:0001895;5.54e-07;9!UBERON:0002107;9.83e-07;19!UBERON:0006925;9.83e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.75e-54,56;UBERON:0005068,1.75e-54,56;UBERON:0006241,1.75e-54,56;UBERON:0007135,1.75e-54,56;UBERON:0000073,1.98e-50,53;UBERON:0002616,1.98e-50,53;UBERON:0001017,3.42e-48,81;UBERON:0001016,9.31e-48,89;UBERON:0000955,7.38e-42,68;UBERON:0006238,7.38e-42,68;UBERON:0002780,1.01e-40,41;UBERON:0001890,1.01e-40,41;UBERON:0003080,1.01e-40,41;UBERON:0006240,1.01e-40,41;UBERON:0001893,2.26e-39,34;UBERON:0003528,3.89e-39,34;UBERON:0002020,3.89e-39,34;UBERON:0002346,9.44e-38,86;UBERON:0001869,1.55e-36,32;UBERON:0002791,2.58e-36,32;UBERON:0003075,1.26e-34,82;UBERON:0007284,1.26e-34,82;UBERON:0002619,4.61e-31,22;UBERON:0001950,5.42e-28,20;UBERON:0007023,6.17e-28,114;UBERON:0000956,1.14e-26,25;UBERON:0000203,1.14e-26,25;UBERON:0003056,7.13e-26,61;UBERON:0010371,1.50e-25,104;UBERON:0011216,5.78e-25,223;UBERON:0004121,6.02e-21,171;UBERON:0000924,6.02e-21,171;UBERON:0006601,6.02e-21,171;UBERON:0010314,3.59e-18,132;UBERON:0003076,2.14e-14,15;UBERON:0003057,2.14e-14,15;UBERON:0000025,2.51e-14,192;UBERON:0000125,5.12e-14,9;UBERON:0002308,5.12e-14,9;UBERON:0004732,2.99e-12,13;UBERON:0009663,2.98e-11,7;UBERON:0002420,4.32e-11,9;UBERON:0007245,4.32e-11,9;UBERON:0010009,4.32e-11,9;UBERON:0010011,4.32e-11,9;UBERON:0000454,4.32e-11,9;UBERON:0004733,1.12e-10,12;UBERON:0002028,1.12e-10,12;UBERON:0007277,1.12e-10,12;UBERON:0000200,2.10e-10,6;UBERON:0001872,9.13e-10,5;UBERON:0002021,9.99e-10,5;UBERON:0002298,1.53e-09,6;UBERON:0004111,4.91e-09,240;UBERON:0000369,3.05e-07,4;UBERON:0002435,3.05e-07,4;UBERON:0000204,3.05e-07,4;UBERON:0010082,3.05e-07,4;UBERON:0002680,4.87e-07,9;UBERON:0001895,4.87e-07,9;UBERON:0010092,4.87e-07,9;UBERON:0002107,8.99e-07,19;UBERON:0006925,8.99e-07,19;UBERON:0008836,8.99e-07,19 | |||
|phase1_expression=1.99846217197612,1.07050261945492,3.10099689011137,1.0007329835313,0.893922188854576,5.23403114460221,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0.755751887377619,0.727752183563449,0,0.411167888021826,0,0.575384784644301,0.512321413058201,0,0,1.29096936716765,0,0,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0,0.659702600373432,0.598390972864896,0.426224750532694,0.290209238628584,0,0.622822248995575,1.00499466102697,0,0,0,0.736555271975129,0.316462387440884,0,0,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.916853528483988,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,4.91413608338813,2.95394953340702,0,1.22988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,2.46535615237033,10.5737338925794,12.3943159938587,14.0129101103282,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,9.10978977003352,3.09315525111078,3.68535783735567,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,2.12189300012382,0,0.30239029332968,0.248107807818777,3.37616341233737,0.841980283299221,3.84417447767103,1.02341449813341,0.64341568457443,2.96836132889982,0,0,0,0,0,1.81289174387433,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0,0.831076008928724,0,0,0.522870902049801,0,0,0,4.01859945426117,3.47963966309705,4.29049399587058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14232723417828,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.497992903438899,0,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,1.23087398947712,1.89318974933188,0.66614393599564,0,0,0.586032717087576,0,0.111443384277478,0,0.71623345421307,0.296964680832639,0.307160702099232,0,3.65740482667333,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,3.24688343566479,5.98841394003583,0,0.0874599999961957,0.724999575434793,0,0,0.236387681767936,0.689486746482929,0.874813840149763,1.04174996959975,1.77148277162768,3.73848959738765,18.30980835805,23.6639616252821,23.6438095162838,3.94893714877151,0,0,0.307801034015188,0.341826167541004,0.23056390438806,1.70539524378567,0,3.82801391678303,1.74035427463538,5.33034776018635,0,0,0.498635045700469,0,0,0,0,0,0,0,0.424059214301822,0,0.995261931078505,0.707660516026713,1.22206028986725,0,0,0,4.17887024480198,0.802577647298789,2.81117334870407,0,0,0,0.394584402849391,0,12.5489832268501,1.45329133145522,0.300646838828985,0.72581733978073,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,4.24182332904387,0,0,0.85381197895741,0,0.144090417154106,0,0.857974989309823,0,0,0,0,0,0,0,4.20294202096853,2.32739144116388,2.55493176133945,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0.599037001496973,1.71690419254628,1.11585728720936,0.268733889946905,0,1.16495949527454,2.36349546921671,2.71972332657849,3.23537010500087,1.27955725969173,0,9.54275627771164,2.99647493445466,0.160753148465019,0,0,1.799791132412,0,4.25246896606173,0,0.788057072991982,0.419636705079985,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,3.51725360827398,3.97520666736664,4.65418642901582,1.98348902614035,0,0,0.427149650270779,0.314408610199332,0.828478110694391,0,0,0.121792598380896,0,0,0.7520696820681,0.612691153526923,0.983617892129413,2.04170325125305,3.54427271986794,3.29470915235301,3.6305369904885,4.0138643698305,2.99508439149501,1.55241007353459,3.04366996859708,0,0,0.856396000634902,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.657852148736121,0,0,0,0,0,0,4.28601152070365,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0.255788742607303,1.72519698234691,4.4034463719651,0,5.60117348848283,1.70059936081346,10.4106041977562,0.558644917973244,0,0.47317047000752,2.40171224485641,0,0,3.14723202972652,2.8339315265117,6.704622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| ||
|short_description=p6@CHN2 | |||
}} | }} |
Latest revision as of 04:05, 18 September 2015
Short description: | p6@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CHN2_5end |
Coexpression cluster: | C1458_cerebellum_small_temporal_parietal_occipital_somatostatinoma_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000435288, NM_004067, uc003szz.2, uc010kva.2, uc010kvb.2, uc010kvc.2, uc010kvd.2, uc011jzt.1_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | F5GWP4A4D1A2P52757 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-07 | 12 |