FFCP PHASE1:Hg19::chr8:135577829..135577861,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:135577829..135577861,- to FFCP PHASE1:Hg19::chr8:135577829..135577861,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57623 | |EntrezGene=57623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19899 | |HGNC=19899 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000518408_5end | |||
|cluster_id=chr8:135577829..135577861,- | |||
|coexpression_cluster_id=C631 | |||
|description=CAGE_peak_6_at_ZFAT_5end | |||
|id=chr8:135577829..135577861,- | |||
|ontology_enrichment_celltype=CL:0000945!1.66e-27!24;CL:0000826!1.66e-27!24;CL:0000542!3.38e-15!53;CL:0000051!3.38e-15!53;CL:0000838!2.70e-13!52;CL:0000785!5.95e-11!2;CL:0000955!5.95e-11!2;CL:0000818!5.95e-11!2;CL:0000954!5.95e-11!2;CL:0000816!5.95e-11!2;CL:0000817!1.44e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.39e-70;24!CL:0000946;7.46e-16;1!CL:0000786;7.46e-16;1!CL:0000542;7.62e-15;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.89e-70,24;CL:0000826,4.89e-70,24;CL:0000838,7.57e-32,52;CL:0000542,3.15e-31,53;CL:0000051,3.15e-31,53;CL:0000946,7.46e-16,1;CL:0000786,7.46e-16,1;CL:0000980,7.46e-16,1;CL:0002087,1.10e-13,115;CL:0002031,4.53e-13,120;CL:0000738,2.10e-11,136;CL:0000236,1.11e-09,14;CL:0002032,1.87e-09,161;CL:0000837,1.87e-09,161;CL:0000037,5.19e-09,168;CL:0000785,1.39e-08,2;CL:0000955,1.39e-08,2;CL:0000818,1.39e-08,2;CL:0000954,1.39e-08,2;CL:0000816,1.39e-08,2;CL:0000988,1.72e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;7.62e-15;53!CL:0000954;1.39e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.97e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:630;6.44e-16;1!DOID:0050177;6.44e-16;1!DOID:0050427;6.44e-16;1!DOID:2355;1.34e-15;1!DOID:4960;2.56e-15;1!DOID:0070004;2.56e-15;1!DOID:0060058;1.54e-13;10!DOID:74;1.86e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.44e-16,1;DOID:0050177,6.44e-16,1;DOID:0050427,6.44e-16,1;DOID:2355,1.54e-15,1;DOID:4960,1.78e-15,1;DOID:0070004,1.78e-15,1;DOID:0060058,1.60e-13,10;DOID:74,2.00e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.16e-17!7;UBERON:0002106!6.32e-15!3;UBERON:0004854!6.32e-15!3;UBERON:0009034!6.32e-15!3;UBERON:0002095!6.32e-15!3;UBERON:0004782!6.32e-15!3;UBERON:0003281!6.32e-15!3;UBERON:0009664!6.32e-15!3;UBERON:0002296!6.32e-15!3;UBERON:0005602!6.32e-15!3;UBERON:0001179!6.32e-15!3;UBERON:0006293!6.32e-15!3;UBERON:0007023!2.86e-11!115;UBERON:0000988!5.90e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.56e-15;1!UBERON:0001961;2.56e-15;1!UBERON:0001744;2.56e-15;1!UBERON:0001042;2.56e-15;1!UBERON:0001735;2.56e-15;1!UBERON:0006562;2.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.17e-15,1;UBERON:0001961,3.17e-15,1;UBERON:0001744,3.17e-15,1;UBERON:0001735,3.17e-15,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,2.38091709404843,1.81034797021462,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,1.20118796110804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,38.1562896929315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28617996577618,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,2.37133958277533,20.0957787328478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,1.89436477626897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,25.0057752996041,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.563903507879121,0.0644578879735772,7.79541016214446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.452122368852043,0.186224142887574,0,0,0,0,0,1.21233695426258,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,28.2100273226845 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,2.38091709404843,1.81034797021462,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,1.20118796110804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,38.1562896929315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28617996577618,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,2.37133958277533,20.0957787328478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,1.89436477626897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,25.0057752996041,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.563903507879121,0.0644578879735772,7.79541016214446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.452122368852043,0.186224142887574,0,0,0,0,0,1.21233695426258,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,28.2100273226845 | ||
|short_description=p6@ZFAT | |||
}} | }} |
Latest revision as of 17:49, 16 September 2015
Short description: | p6@ZFAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ZFAT_5end |
Coexpression cluster: | C631_b_plasma_xeroderma_lymphoma_splenic_Burkitt_B |
Association with transcript: | 52bp_to_ENST00000518408_5end |
EntrezGene: | ZFAT |
HGNC: | 19899 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.89e-70 | 24 |
pro-B cell | 4.89e-70 | 24 |
lymphoid lineage restricted progenitor cell | 7.57e-32 | 52 |
lymphocyte | 3.15e-31 | 53 |
common lymphoid progenitor | 3.15e-31 | 53 |
antibody secreting cell | 7.46e-16 | 1 |
plasma cell | 7.46e-16 | 1 |
plasmablast | 7.46e-16 | 1 |
nongranular leukocyte | 1.10e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 4.53e-13 | 120 |
leukocyte | 2.10e-11 | 136 |
B cell | 1.11e-09 | 14 |
hematopoietic oligopotent progenitor cell | 1.87e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-09 | 161 |
hematopoietic stem cell | 5.19e-09 | 168 |
mature B cell | 1.39e-08 | 2 |
pre-B-II cell | 1.39e-08 | 2 |
transitional stage B cell | 1.39e-08 | 2 |
small pre-B-II cell | 1.39e-08 | 2 |
immature B cell | 1.39e-08 | 2 |
hematopoietic cell | 1.72e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.17e-15 | 1 |
mucosa-associated lymphoid tissue | 3.17e-15 | 1 |
lymphoid tissue | 3.17e-15 | 1 |
tonsillar ring | 3.17e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.44e-16 | 1 |
monogenic disease | 6.44e-16 | 1 |
xeroderma pigmentosum | 6.44e-16 | 1 |
anemia | 1.54e-15 | 1 |
bone marrow cancer | 1.78e-15 | 1 |
myeloma | 1.78e-15 | 1 |
lymphoma | 1.60e-13 | 10 |
hematopoietic system disease | 2.00e-08 | 2 |