FFCP PHASE1:Hg19::chr8:139926277..139926290,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:139926277..139926290,- to FFCP PHASE1:Hg19::chr8:139926277..139926290,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=169044 | |EntrezGene=169044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22989 | |HGNC=22989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_ENST00000484387_5end | |||
|cluster_id=chr8:139926277..139926290,- | |||
|coexpression_cluster_id=C2919 | |||
|description=CAGE_peak_1_at_COL22A1_5end | |||
|id=chr8:139926277..139926290,- | |||
|ontology_enrichment_celltype=CL:0000221!8.73e-09!71;CL:0000055!2.56e-08!180;CL:0002321!7.10e-08!248;CL:0000220!1.54e-07!246;CL:0000359!3.86e-07!32;CL:0002334!7.81e-07!12;CL:0000128!8.95e-07!7;CL:0000126!8.95e-07!7;CL:0000127!8.95e-07!7;CL:0002453!8.95e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;7.38e-11;7!CL:0000126;7.38e-11;7!CL:0000127;7.38e-11;7!CL:0000244;6.71e-08;4!CL:0000731;6.71e-08;4!CL:0000569;1.13e-07;4!CL:0000359;1.58e-07;32!CL:0002319;1.95e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,8.97e-11,7;CL:0000126,8.97e-11,7;CL:0000127,8.97e-11,7;CL:0002453,8.97e-11,7;CL:0000359,4.91e-08,32;CL:0000244,6.86e-08,4;CL:0000731,6.86e-08,4;CL:0000569,1.14e-07,4;CL:0000011,1.14e-07,4;CL:0002319,2.17e-07,25;CL:0000221,3.98e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000011;1.13e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!2.19e-14!309;UBERON:0000119!7.31e-14!312;UBERON:0000922!1.74e-12!612;UBERON:0004111!2.36e-12!241;UBERON:0000025!2.60e-11!194;UBERON:0000468!3.87e-11!659;UBERON:0000475!3.96e-11!365;UBERON:0002050!2.62e-10!605;UBERON:0005423!2.62e-10!605;UBERON:0000923!5.67e-10!604;UBERON:0005291!5.67e-10!604;UBERON:0006598!5.67e-10!604;UBERON:0002532!5.67e-10!604;UBERON:0000480!6.84e-10!626;UBERON:0000481!7.26e-10!347;UBERON:0000467!1.26e-09!625;UBERON:0000477!3.53e-09!286;UBERON:0004573!1.61e-07!33;UBERON:0004571!1.61e-07!33;UBERON:0001637!2.83e-07!42;UBERON:0003509!2.83e-07!42;UBERON:0004572!2.83e-07!42;UBERON:0003076!5.19e-07!15;UBERON:0003057!5.19e-07!15;UBERON:0003103!6.75e-07!69;UBERON:0000924!9.33e-07!173;UBERON:0006601!9.33e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.24e-08;33!UBERON:0004571;1.24e-08;33!UBERON:0002037;2.18e-08;6!UBERON:0001637;5.12e-07;42!UBERON:0003509;5.12e-07;42!UBERON:0004572;5.12e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.35e-09,33;UBERON:0004571,1.35e-09,33;UBERON:0001637,8.55e-09,42;UBERON:0003509,8.55e-09,42;UBERON:0004572,8.55e-09,42;UBERON:0002037,2.12e-08,6;UBERON:0006215,2.12e-08,6;UBERON:0000483,3.34e-08,306;UBERON:0000119,5.82e-08,309;UBERON:0000025,2.07e-07,192;UBERON:0000922,2.78e-07,592;UBERON:0000486,3.59e-07,83;UBERON:0004111,5.65e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,3.36162573225888,3.01347264011988,4.38186054232424,3.90346239032406,2.46242116153576,1.02000345622126,3.76145665773705,4.86601178122796,5.74872585306114,5.02170558379211,0,0,0,0,0,0,1.83884244895785,5.4217065380085,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.527008714158756,0.0654895377488563,3.27865759463288,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,6.8480983908555,0,3.90499292077071,0,1.62028389576352,0,0,0,0,0,0,0,0,2.61656431285521,0,0,1.98613771219828,2.29469296599051,1.06400514659507,0.560677600142307,0,0.49333509683432,0.622422070799533,0.134710672069688,0.653847612453835,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0.453728732640084,0.358779271377724,0.213557388818567,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0.169560592310488,5.60456474173561,6.54590689418003,2.86804595389004,0.609868530647977,0.132529768321485,0.348581828608555,1.45125477021519,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,1.53650399572076,0,0.502644862058154,3.61094936118265,0,0,0,4.40535538905292,0,1.15493158208859,0,0.570762456703795,0,0,0,0,0,0,7.55919576894868,4.82035330624114,1.34337784054272,0.581267877027924,0.766765358330422,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,1.42636905040718,0.434343920002738,0,0.895304816199478,0,0,0,0,10.9260688415659,6.50699269288109,0.773288812777695,2.17771144934653,4.46557126157214,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,2.05886054286514,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0,0.384417447767103,1.02341449813341,0.321707842287215,1.48418066444991,6.32259744590888,33.559166084181,6.40591816907711,12.4621063004069,3.83494248917865,0.120859449591622,6.81721999031168,0.184161977871793,0,0,0,3.15839729035188,1.84836809050595,0.784349769176855,4.38417673959782,6.64975262025117,0,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0.650756789328606,0,1.37354197227515,1.32015199872941,0.574265537996172,0.650060246036521,0,5.41356022435883,0,0.15350367472613,0.551346289938122,0,0.145016693914229,0.0852266274161009,2.75999310504886,2.31398881505369,1.34533047155574,0.255225424989168,0.10115778085555,0.929691098594572,8.81474571125792,0.6970372701606,0,3.19383618190213,0.869932992075073,0.18532421910392,1.00187420719394,0,0,0,0,0,47.4122839409646,0,0,0,0,2.22400729730648,0,8.00391066854064,0,0.243713489631284,0,0.136499911407986,0,11.3008116620243,15.4382296192915,1.99031692572366,6.13831239355268,0,0,0,0.6196469961995,3.3803472303869,0,0,0,0,0,0,0,0,1.05844323998063,0.670302275535787,1.08890984861323,0,9.47111819876706,5.05414427002877,6.65145230305014,32.3909994291813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,6.80218419206545,8.99964406018962,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,5.51589397186343,0,0,0,0.241192877250816,1.52581736317083,4.42317039724898,1.77328571372128,0.219385397153973,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,1.99052386215701,0,0.611030144933625,2.37216902944498,1.85345908419754,2.92381458615275,0.539209063845416,1.60515529459758,0.234264445725339,0,0.391329237864179,0,4.3404284313433,1.20990716048664,0.30607276163049,0.379119477770928,0.450970258243478,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,1.80784592624426,0.822251547880505,0,0,0.782205530939212,0,0.213452994739353,0,0,0,30.5439096194297,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0,0.551639951094387,0.524545881349981,0,2.86859742932552,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0,0,0.592834895693833,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0.554645257684261,0.620964029413834,0,0.124980407962107,1.51649117541648,0,0.705797459094515,0,8.69526171664951,0,0,0,0,0,0.889811221596536,6.40752191511386,3.62954217031774,28.9113193083972,7.54061264947133,0.955780602982214,2.24901556081802,1.70789252563885,0,2.65841714557995,0,1.20206087197775,0,0.406870733204662,0,0.751873899297419,0,0,0,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,0.76872455576384,0,0,0,0,0,0,0,0,3.16968185037941,0,0.213383459388282,0,0,0,0.419638523158333,4.35454082023081,0,7.97903604335445,0,0.54604819096007,0.509197589862076,0,0,0,2.54403480522735,0,5.60399523799829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| ||
|short_description=p1@COL22A1 | |||
}} | }} |
Latest revision as of 18:45, 16 September 2015
Short description: | p1@COL22A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL22A1_5end |
Coexpression cluster: | C2919_smallcell_Smooth_skeletal_small_Urothelial_pituitary_gastrointestinal |
Association with transcript: | -28bp_to_ENST00000484387_5end |
EntrezGene: | COL22A1 |
HGNC: | 22989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 8.97e-11 | 7 |
macroglial cell | 8.97e-11 | 7 |
astrocyte | 8.97e-11 | 7 |
oligodendrocyte precursor cell | 8.97e-11 | 7 |
vascular associated smooth muscle cell | 4.91e-08 | 32 |
transitional epithelial cell | 6.86e-08 | 4 |
urothelial cell | 6.86e-08 | 4 |
cardiac mesenchymal cell | 1.14e-07 | 4 |
migratory trunk neural crest cell | 1.14e-07 | 4 |
neural cell | 2.17e-07 | 25 |
ectodermal cell | 3.98e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 1.35e-09 | 33 |
systemic arterial system | 1.35e-09 | 33 |
artery | 8.55e-09 | 42 |
arterial blood vessel | 8.55e-09 | 42 |
arterial system | 8.55e-09 | 42 |
cerebellum | 2.12e-08 | 6 |
rhombic lip | 2.12e-08 | 6 |
epithelium | 3.34e-08 | 306 |
cell layer | 5.82e-08 | 309 |
tube | 2.07e-07 | 192 |
embryo | 2.78e-07 | 592 |
multilaminar epithelium | 3.59e-07 | 83 |
anatomical conduit | 5.65e-07 | 240 |