FFCP PHASE1:Hg19::chr8:61429611..61429631,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:61429611..61429631,+ to FFCP PHASE1:Hg19::chr8:61429611..61429631,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5862 | |EntrezGene=5862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9763 | |HGNC=9763 | ||
|TSSclassifier=strong | |||
|UniProt=P61019 | |UniProt=P61019 | ||
|association_with_transcript=52bp_to_uc003xud.1,uc011lef.1_5end | |||
|cluster_id=chr8:61429611..61429631,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_5_at_RAB2A_5end | |||
|id=chr8:61429611..61429631,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-15!42;CL:0000860!1.13e-14!45;CL:0000738!9.60e-11!140;CL:0000037!4.30e-10!172;CL:0000566!4.30e-10!172;CL:0000766!2.67e-09!76;CL:0002087!3.25e-09!119;CL:0000988!5.13e-09!182;CL:0000034!1.25e-08!444;CL:0002032!2.56e-08!165;CL:0000837!2.56e-08!165;CL:0002009!2.93e-08!65;CL:0000048!3.36e-08!430;CL:0000134!3.49e-08!358;CL:0002194!5.45e-08!63;CL:0000576!5.45e-08!63;CL:0000040!5.45e-08!63;CL:0000559!5.45e-08!63;CL:0000723!7.40e-08!436;CL:0000763!2.76e-07!112;CL:0000049!2.76e-07!112;CL:0002320!7.58e-07!365;CL:0000557!9.85e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.03e-14;33!CL:0002057;3.03e-14;33!CL:0000576;9.17e-10;48!CL:0000473;1.27e-07;39!CL:0000234;1.27e-07;39!CL:0000094;6.51e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.59e-16,42;CL:0002057,6.59e-16,42;CL:0000738,8.34e-12,136;CL:0000037,4.68e-11,168;CL:0000473,7.20e-11,48;CL:0000234,7.20e-11,48;CL:0000766,2.54e-10,72;CL:0002087,5.39e-10,115;CL:0000988,9.29e-10,177;CL:0002032,3.71e-09,161;CL:0000837,3.71e-09,161;CL:0002009,5.14e-09,61;CL:0000034,8.65e-09,441;CL:0002194,9.77e-09,59;CL:0000576,9.77e-09,59;CL:0000040,9.77e-09,59;CL:0000559,9.77e-09,59;CL:0000134,1.54e-08,354;CL:0000048,2.51e-08,427;CL:0000763,5.25e-08,108;CL:0000049,5.25e-08,108;CL:0000723,5.34e-08,433;CL:0000557,1.61e-07,67;CL:0002031,3.22e-07,120;CL:0002320,4.03e-07,361;CL:0000094,9.71e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.01e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.49e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.07e-08,371;UBERON:0002371,8.20e-07,76 | |||
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| ||
|short_description=p5@RAB2A | |||
}} | }} |
Latest revision as of 16:33, 18 September 2015
Short description: | p5@RAB2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAB2A_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 52bp_to_uc003xud.1, uc011lef.1_5end |
EntrezGene: | RAB2A |
HGNC: | 9763 |
UniProt: | P61019 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.59e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.59e-16 | 42 |
leukocyte | 8.34e-12 | 136 |
hematopoietic stem cell | 4.68e-11 | 168 |
defensive cell | 7.20e-11 | 48 |
phagocyte | 7.20e-11 | 48 |
myeloid leukocyte | 2.54e-10 | 72 |
nongranular leukocyte | 5.39e-10 | 115 |
hematopoietic cell | 9.29e-10 | 177 |
hematopoietic oligopotent progenitor cell | 3.71e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.71e-09 | 161 |
macrophage dendritic cell progenitor | 5.14e-09 | 61 |
stem cell | 8.65e-09 | 441 |
monopoietic cell | 9.77e-09 | 59 |
monocyte | 9.77e-09 | 59 |
monoblast | 9.77e-09 | 59 |
promonocyte | 9.77e-09 | 59 |
mesenchymal cell | 1.54e-08 | 354 |
multi fate stem cell | 2.51e-08 | 427 |
myeloid cell | 5.25e-08 | 108 |
common myeloid progenitor | 5.25e-08 | 108 |
somatic stem cell | 5.34e-08 | 433 |
granulocyte monocyte progenitor cell | 1.61e-07 | 67 |
hematopoietic lineage restricted progenitor cell | 3.22e-07 | 120 |
connective tissue cell | 4.03e-07 | 361 |
granulocyte | 9.71e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.07e-08 | 371 |
bone marrow | 8.20e-07 | 76 |