FFCP PHASE1:Hg19::chrX:105936968..105936975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79589 | |EntrezGene=79589 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21153 | |HGNC=21153 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSK4 | |UniProt=Q5JSK4 | ||
|association_with_transcript=-48bp_to_ENST00000418562_5end | |||
|cluster_id=chrX:105936968..105936975,+ | |||
|coexpression_cluster_id=C234 | |||
|description=CAGE_peak_11_at_RNF128_5end | |||
|id=chrX:105936968..105936975,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.63e-12!12;CL:0000417!5.63e-12!12;CL:0000668!5.63e-12!12;CL:0000414!5.63e-12!12;CL:0000412!5.63e-12!12;CL:0000182!5.63e-12!12;CL:0000223!7.36e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:7!5.57e-17!39;DOID:1799!1.98e-10!1;DOID:10165!1.98e-10!1;DOID:1798!1.98e-10!1;DOID:305!5.73e-10!106;DOID:0050687!1.20e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.43e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.43e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.74e-12!169;UBERON:0000925!6.74e-12!169;UBERON:0006595!6.74e-12!169;UBERON:0003929!1.06e-11!54;UBERON:0001007!1.60e-11!155;UBERON:0001555!1.60e-11!155;UBERON:0007026!1.60e-11!155;UBERON:0005911!5.56e-11!82;UBERON:0004921!1.06e-10!129;UBERON:0004185!1.06e-10!129;UBERON:0008835!8.56e-10!22;UBERON:0003894!8.56e-10!22;UBERON:0009854!2.32e-09!23;UBERON:0007499!1.34e-08!25;UBERON:0009497!1.34e-08!25;UBERON:0000015!1.34e-08!25;UBERON:0002423!1.34e-08!25;UBERON:0006235!1.34e-08!25;UBERON:0004161!1.34e-08!25;UBERON:0002530!1.97e-08!59;UBERON:0009856!2.92e-08!26;UBERON:0000160!1.09e-07!27;UBERON:0002107!1.28e-07!19;UBERON:0006925!1.28e-07!19;UBERON:0008836!1.28e-07!19;UBERON:0002365!5.26e-07!31;UBERON:0002330!5.26e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;3.10e-50;4!UBERON:0004785;3.10e-50;4!UBERON:0000974;4.27e-34;6!UBERON:0003729;1.21e-16;13!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0000344;2.29e-11;20!UBERON:0000165;1.52e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,3.10e-50,4;UBERON:0004785,3.10e-50,4;UBERON:0000974,3.81e-21,10;UBERON:0003729,1.21e-16,13;UBERON:0000344,2.29e-11,20;UBERON:0000166,1.80e-10,22;UBERON:0000165,2.67e-08,29;UBERON:0000930,2.67e-08,29;UBERON:0000161,5.81e-07,36 | |||
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|short_description=p11@RNF128 | |||
}} | }} |
Latest revision as of 22:08, 18 September 2015
Short description: | p11@RNF128 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RNF128_5end |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | -48bp_to_ENST00000418562_5end |
EntrezGene: | RNF128 |
HGNC: | 21153 |
UniProt: | Q5JSK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 3.10e-50 | 4 |
respiratory system mucosa | 3.10e-50 | 4 |
neck | 3.81e-21 | 10 |
mouth mucosa | 1.21e-16 | 13 |
mucosa | 2.29e-11 | 20 |
oral opening | 1.80e-10 | 22 |
mouth | 2.67e-08 | 29 |
stomodeum | 2.67e-08 | 29 |
orifice | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.43e-15 | 14 |