FFCP PHASE1:Hg19::chrX:153602960..153602977,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:153602960..153602977,- to FFCP PHASE1:Hg19::chrX:153602960..153602977,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2316 | |EntrezGene=2316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3754 | |HGNC=3754 | ||
|TSSclassifier=strong | |||
|UniProt=P21333 | |UniProt=P21333 | ||
|association_with_transcript=16bp_to_ENST00000369850_5end | |||
|cluster_id=chrX:153602960..153602977,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_4_at_FLNA_5end | |||
|id=chrX:153602960..153602977,- | |||
|ontology_enrichment_celltype=CL:0000055!3.44e-14!180;CL:0000192!6.47e-09!42;CL:0000514!6.47e-09!42;CL:0000359!4.14e-08!32;CL:0000183!5.95e-07!59;CL:0000187!9.54e-07!54;CL:0000680!9.68e-07!57;CL:0000056!9.68e-07!57;CL:0000355!9.68e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.87e-08;32!CL:0000192;5.85e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.25e-09,43;CL:0000514,5.25e-09,43;CL:0000359,3.42e-08,32;CL:0000057,7.03e-07,76;CL:0000187,9.97e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;5.85e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.42e-11!84;UBERON:0001009!3.75e-11!113;UBERON:0003914!7.30e-11!118;UBERON:0004535!8.23e-11!110;UBERON:0001981!1.97e-10!60;UBERON:0007500!1.97e-10!60;UBERON:0004537!1.97e-10!60;UBERON:0006965!1.97e-10!60;UBERON:0001637!4.82e-10!42;UBERON:0003509!4.82e-10!42;UBERON:0004572!4.82e-10!42;UBERON:0002049!3.23e-09!79;UBERON:0007798!3.23e-09!79;UBERON:0003104!4.38e-09!238;UBERON:0009142!4.38e-09!238;UBERON:0005256!5.12e-09!143;UBERON:0002100!9.38e-09!216;UBERON:0000055!1.53e-08!69;UBERON:0002385!1.05e-07!63;UBERON:0001015!1.05e-07!63;UBERON:0000383!1.05e-07!63;UBERON:0000468!1.42e-07!659;UBERON:0004573!2.08e-07!33;UBERON:0004571!2.08e-07!33;UBERON:0000490!3.36e-07!138;UBERON:0001134!6.62e-07!61;UBERON:0002036!6.62e-07!61;UBERON:0003082!6.62e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.08e-07;42!UBERON:0003509;1.08e-07;42!UBERON:0004572;1.08e-07;42!UBERON:0004573;5.96e-07;33!UBERON:0004571;5.96e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.07e-11,83;UBERON:0003914,4.14e-11,117;UBERON:0001009,8.66e-11,112;UBERON:0004535,1.90e-10,109;UBERON:0001637,3.77e-10,42;UBERON:0003509,3.77e-10,42;UBERON:0004572,3.77e-10,42;UBERON:0007500,4.69e-10,59;UBERON:0001981,4.69e-10,59;UBERON:0004537,4.69e-10,59;UBERON:0006965,4.69e-10,59;UBERON:0003104,3.67e-09,160;UBERON:0009142,3.67e-09,160;UBERON:0002100,4.46e-09,199;UBERON:0002049,8.09e-09,78;UBERON:0007798,8.09e-09,78;UBERON:0005256,2.40e-08,122;UBERON:0000055,5.23e-08,68;UBERON:0002385,1.07e-07,64;UBERON:0001015,1.07e-07,64;UBERON:0000383,1.07e-07,64;UBERON:0004573,1.76e-07,33;UBERON:0004571,1.76e-07,33;UBERON:0007503,5.06e-07,78;UBERON:0000490,5.37e-07,148;UBERON:0001134,6.76e-07,62;UBERON:0002036,6.76e-07,62;UBERON:0003082,6.76e-07,62 | |||
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| ||
|short_description=p4@FLNA | |||
}} | }} |
Latest revision as of 02:50, 20 September 2015
Short description: | p4@FLNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FLNA_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 16bp_to_ENST00000369850_5end |
EntrezGene: | FLNA |
HGNC: | 3754 |
UniProt: | P21333 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.25e-09 | 43 |
smooth muscle myoblast | 5.25e-09 | 43 |
vascular associated smooth muscle cell | 3.42e-08 | 32 |
fibroblast | 7.03e-07 | 76 |
muscle cell | 9.97e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 3.07e-11 | 83 |
epithelial tube | 4.14e-11 | 117 |
circulatory system | 8.66e-11 | 112 |
cardiovascular system | 1.90e-10 | 109 |
artery | 3.77e-10 | 42 |
arterial blood vessel | 3.77e-10 | 42 |
arterial system | 3.77e-10 | 42 |
epithelial tube open at both ends | 4.69e-10 | 59 |
blood vessel | 4.69e-10 | 59 |
blood vasculature | 4.69e-10 | 59 |
vascular cord | 4.69e-10 | 59 |
mesenchyme | 3.67e-09 | 160 |
entire embryonic mesenchyme | 3.67e-09 | 160 |
trunk | 4.46e-09 | 199 |
vasculature | 8.09e-09 | 78 |
vascular system | 8.09e-09 | 78 |
trunk mesenchyme | 2.40e-08 | 122 |
vessel | 5.23e-08 | 68 |
muscle tissue | 1.07e-07 | 64 |
musculature | 1.07e-07 | 64 |
musculature of body | 1.07e-07 | 64 |
systemic artery | 1.76e-07 | 33 |
systemic arterial system | 1.76e-07 | 33 |
epithelial vesicle | 5.06e-07 | 78 |
unilaminar epithelium | 5.37e-07 | 148 |
skeletal muscle tissue | 6.76e-07 | 62 |
striated muscle tissue | 6.76e-07 | 62 |
myotome | 6.76e-07 | 62 |