Personal tools

FFCP PHASE1:Mm9::chr13:90229161..90229221,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:90229161..90229221,-
|DHSsupport=NA
|short_description=p2@LOC100044170,p2@Xrcc4
|DPIdataset=NA
|description=CAGE_peak_2_at_LOC100044170_5end,CAGE_peak_2_at_Xrcc4_5end
|association_with_transcript=0bp_to_ENSMUST00000022115,NM_028012,uc007rjn.2_5end
|EntrezGene=100044170,108138
|EntrezGene=100044170,108138
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=Q924T3
|UniProt=Q924T3
|association_with_transcript=0bp_to_ENSMUST00000022115,NM_028012,uc007rjn.2_5end
|cluster_id=chr13:90229161..90229221,-
|description=CAGE_peak_2_at_LOC100044170_5end,CAGE_peak_2_at_Xrcc4_5end
|id=chr13:90229161..90229221,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!1.31e-11!41;UBERON:0001004!1.05e-10!42;UBERON:0002370!2.20e-09!23;UBERON:0000974!2.20e-09!23;UBERON:0004807!2.20e-09!23;UBERON:0005058!2.20e-09!23;UBERON:0003351!2.20e-09!23;UBERON:0009113!2.20e-09!23;UBERON:0003295!2.20e-09!23;UBERON:0009722!2.20e-09!23;UBERON:0005562!2.20e-09!23;UBERON:0007690!2.20e-09!23;UBERON:0006562!1.73e-08!24;UBERON:0001557!1.73e-08!24;UBERON:0001042!1.73e-08!24;UBERON:0008814!1.73e-08!24;UBERON:0009145!1.73e-08!24;UBERON:0003408!2.66e-08!24;UBERON:0004177!4.22e-08!29;UBERON:0000072!1.17e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.07e-11,41;UBERON:0001004,8.94e-11,42;UBERON:0002370,1.76e-09,23;UBERON:0000974,1.76e-09,23;UBERON:0004807,1.76e-09,23;UBERON:0005058,1.76e-09,23;UBERON:0003351,1.76e-09,23;UBERON:0009113,1.76e-09,23;UBERON:0003295,1.76e-09,23;UBERON:0009722,1.76e-09,23;UBERON:0005562,1.76e-09,23;UBERON:0007690,1.76e-09,23;UBERON:0000153,5.60e-09,43;UBERON:0006562,1.41e-08,24;UBERON:0001557,1.41e-08,24;UBERON:0001042,1.41e-08,24;UBERON:0008814,1.41e-08,24;UBERON:0009145,1.41e-08,24;UBERON:0003408,2.26e-08,24;UBERON:0004177,3.52e-08,29;UBERON:0005057,3.52e-08,29;UBERON:0000072,9.81e-08,27;UBERON:0000077,1.07e-07,35;UBERON:0007811,9.21e-07,36
|phase1_expression=2.08193501236232,0.697950815278722,1.36499771816861,0.90739263392049,0.500895729946347,0.671517087647559,1.86890112476421,12.1375924035082,6.05391505252167,6.08567768437183,17.1217968225505,11.9658238493005,17.462474452983,18.5331253128274,0.999329285446988,2.02475267389826,0.699561878128147,5.20512572841092,7.54129384831563,6.36584477697045,4.84746753861098,2.08510997521859,3.6567970479451,1.59992422793407,3.21172993494038,0,1.29228598847722,1.50829862880122,1.71021077510736,1.00812051903972,2.21730510655305,0,0,0,1.44425809875637,1.82858109894342,2.24586291888606,12.9744805528441,8.5946887897618,14.1351410872926,9.41170380849623,12.9778642142105,8.73918635456076,3.65100772129174,3.64956952390252,2.0190142737785,0,0.65407546914134,0.219686182734472,1.36100929351998,0.139986421625363,0,5.70460860596304,7.97898356212479,11.7632829699862,0.771778308107841,1.14613375975503,1.54701627683233,0.404632921719196,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0,0.384218305321555,2.48855069540346,1.62007125998029,1.47227472945967,0.856952953211411,0.883474163806454,1.95985278743926,1.82106394934649,1.83843757322004,0,1.53224805702225,1.99688493233117,1.05509030184155,0.823388792421687,1.04182674111352,0.837548997004143,2.8138130501584,2.59757021220577,2.35702868378934,3.27454865837937,1.4911955666024,4.39211921332468,3.17400552448499,6.66688324013859,4.30211938490693,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,1.54488862144927,4.09032774187339,4.67614808285164,2.82671659608272,4.3661460130771,1.28326477414318,0,7.11066703153331,1.29894624606728,3.04031838570118,3.53867111510348,1.94112595522402,13.4647699496529,3.56261133755579,1.90833859442749,2.43572382649713,2.53677046981664,4.37095657602605,2.4693628498498,2.13633205260448,2.96633961281249,3.90418263683761,0.884610551949874,3.39710384889559,1.32504911076236,1.45462575940567,1.86391761218122,3.51336956413857,1.67557365450764,1.78819938646014,3.83408398418945,1.79970819298022,3.30382590389968,2.39665023047716,3.66000482254901,5.40313714085317,3.12883776346098,1.27857728665165,2.90903262383384,2.92034273521964,2.74966282395854,3.73220911830279,2.27450482590307,2.73574412652416,2.34216797332867,2.98872735763515,2.70093194708024,4.37043971723574,2.99360596265843,5.12454881139399,3.46696380870997,1.81092359517311,3.23351989399263,9.8335161687266,7.74184946321375,3.28793598641362,7.78532297831674,5.92028683087683,6.37924622864625,3.18454826909589,0.702213187313235,2.57347907114715,1.98914449576915,2.89976081549703,4.69052119962192,3.06105504483725,6.39210786080068,6.09969118416952,4.78228049950873,5.11574678450897,2.68273401399619,2.33530684734339,5.26591519723137,7.55170334763838,3.4859588104718,4.23979963533464,3.73235195994786,3.48936688776967,4.20579897128254,3.19004298375782,1.32167513193519,1.32225283331772,3.62590025909898,3.25131340604614,2.57734922644187,2.62188582010345,2.00140239460383,3.61428689613862,2.84717436926707,2.79988223030818,3.77002813200404,2.58643413653496,1.55971269695296,0,4.10662294761919,2.19055400579804,0.569003702859245,5.36968009265725,4.50830942692322,6.72049381889537,6.20647958936402,3.99774173374816,5.37510565556187,4.42830443938806,3.1399745568275,2.34454611451421,0,2.33583148002532,1.96558995113203,0.674586337154561,2.02860121388503,0.964708639009667,2.5462585178142,1.72617682470486,2.43202840162553,2.19649130550465,4.31304619582064,2.60498663367952,2.18426371180192,1.76805214562978,1.79397413521912,0.964887042726734,8.31389355749721,2.27389694124582,3.58522948172457,5.60158783058121,4.45911471748154,7.87279409976534,5.95109102215034,3.51240566144038,5.67486518782288,4.20782910332672,5.58091690301205,5.24362607090362,5.87128938344045,5.06271705035291,0,1.63171705145613,3.93411418415229,1.93155722413313,2.56880943980467,2.81308047821288,1.80328439914343,2.7771801992481,3.78609863299508,2.34263246577983,2.80050417052639,2.38968797952552,2.22798674082394,1.41538265394416,1.21443210502468,3.21481443702443,2.37172666767914,4.17717711348349,3.40656204499845,2.13678724400706,3.09485222771795,3.46437258242324,1.32745138339963,2.18502572539483,1.209294227859,2.82907619633847,1.77181135728464,4.61152721915891,2.58428293168221,2.18120237686503,2.13898427030833,3.47640433729398,1.05418608574999,0,3.06395645178409,2.52085531643834,0.517434735131018,3.42939256050548,4.61084607469911,3.21063871683727,3.45552943264454,2.43571959291679,2.81606049676452,1.48282449604674,3.52845436887939,3.95727007059552,4.03661066739764,3.79971427047382,3.9392873521035,3.28281799490123,1.7488850197791,3.15223013417866,3.2465467351592,4.12773735926445,2.22233432843654,1.50694765603753,3.41735569302563,2.74533807847827,7.9889862097112,6.57771825921193,8.29199842826543,0.954670618015114,3.79603192297362,4.67634774391752,2.59212817972323,2.71814784818809,2.40198820120795,2.15782954215713,2.0663363931334,1.83229159388821,2.07383957266869,0.621339313086926,6.20062232552609,2.8408143748356,1.82004339502807,2.91676782516071,3.22899558694328,1.85851738039856,2.34714477291508,1.95306577265925,1.36317147753424,3.14059357073808,3.16833006883652,21.1727450820879,1.62180172232131,3.80030541509861,6.49604114888975,11.6367352183863,21.6562676711579,18.7504901251151,17.7227432609493,22.4145518884888,18.213426790545,20.871020323326,19.3941182672107,22.2249354189161,25.1285339690373,1.36038230169127,1.33191572024439,2.06341870201794,2.68615386182526,2.89784391048286,2.064507229963,3.11357761254351,2.78678892802786,1.00314420807073,3.95326289831947,2.76195141904306,0.572895513439397,2.92150409984269,1.37016503954128,1.5107877947794,2.70009000092722,5.85417564191487,2.71885445390523,0.51776031175182,2.17953429926771,2.39414924040619,3.92687293234509,5.34834777550247,1.46729213839588,1.47074806760011,4.00044110042907,2.67845574410562,2.56735367673452,2.77966932940177,3.04175159868288,4.33840585187975,3.183811253976,3.84150914429216,3.27382173046996,5.23923060411381,2.31768651889711,2.89363830695558,2.88460130562315,4.26876868389752,4.80016953339582,3.19456451086807,2.14592570952589,3.77900683244054,3.3879376949519,2.5384382367503,4.20734337607377,2.63069711437843,2.98769050460896,6.17256498823512,2.72860541685601,2.56111654176465,2.86461730218783,2.63392630016142,2.70069255373598,2.49810577937946,3.50897412668113,3.22306581072447,2.29545998482612,1.98532277207564,2.31867835620421
|phase1_expression=2.08193501236232,0.697950815278722,1.36499771816861,0.90739263392049,0.500895729946347,0.671517087647559,1.86890112476421,12.1375924035082,6.05391505252167,6.08567768437183,17.1217968225505,11.9658238493005,17.462474452983,18.5331253128274,0.999329285446988,2.02475267389826,0.699561878128147,5.20512572841092,7.54129384831563,6.36584477697045,4.84746753861098,2.08510997521859,3.6567970479451,1.59992422793407,3.21172993494038,0,1.29228598847722,1.50829862880122,1.71021077510736,1.00812051903972,2.21730510655305,0,0,0,1.44425809875637,1.82858109894342,2.24586291888606,12.9744805528441,8.5946887897618,14.1351410872926,9.41170380849623,12.9778642142105,8.73918635456076,3.65100772129174,3.64956952390252,2.0190142737785,0,0.65407546914134,0.219686182734472,1.36100929351998,0.139986421625363,0,5.70460860596304,7.97898356212479,11.7632829699862,0.771778308107841,1.14613375975503,1.54701627683233,0.404632921719196,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0,0.384218305321555,2.48855069540346,1.62007125998029,1.47227472945967,0.856952953211411,0.883474163806454,1.95985278743926,1.82106394934649,1.83843757322004,0,1.53224805702225,1.99688493233117,1.05509030184155,0.823388792421687,1.04182674111352,0.837548997004143,2.8138130501584,2.59757021220577,2.35702868378934,3.27454865837937,1.4911955666024,4.39211921332468,3.17400552448499,6.66688324013859,4.30211938490693,0.679971333707751,0.539703191637817,0.649776417447669,0.896053774194671,1.54488862144927,4.09032774187339,4.67614808285164,2.82671659608272,4.3661460130771,1.28326477414318,0,7.11066703153331,1.29894624606728,3.04031838570118,3.53867111510348,1.94112595522402,13.4647699496529,3.56261133755579,1.90833859442749,2.43572382649713,2.53677046981664,4.37095657602605,2.4693628498498,2.13633205260448,2.96633961281249,3.90418263683761,0.884610551949874,3.39710384889559,1.32504911076236,1.45462575940567,1.86391761218122,3.51336956413857,1.67557365450764,1.78819938646014,3.83408398418945,1.79970819298022,3.30382590389968,2.39665023047716,3.66000482254901,5.40313714085317,3.12883776346098,1.27857728665165,2.90903262383384,2.92034273521964,2.74966282395854,3.73220911830279,2.27450482590307,2.73574412652416,2.34216797332867,2.98872735763515,2.70093194708024,4.37043971723574,2.99360596265843,5.12454881139399,3.46696380870997,1.81092359517311,3.23351989399263,9.8335161687266,7.74184946321375,3.28793598641362,7.78532297831674,5.92028683087683,6.37924622864625,3.18454826909589,0.702213187313235,2.57347907114715,1.98914449576915,2.89976081549703,4.69052119962192,3.06105504483725,6.39210786080068,6.09969118416952,4.78228049950873,5.11574678450897,2.68273401399619,2.33530684734339,5.26591519723137,7.55170334763838,3.4859588104718,4.23979963533464,3.73235195994786,3.48936688776967,4.20579897128254,3.19004298375782,1.32167513193519,1.32225283331772,3.62590025909898,3.25131340604614,2.57734922644187,2.62188582010345,2.00140239460383,3.61428689613862,2.84717436926707,2.79988223030818,3.77002813200404,2.58643413653496,1.55971269695296,0,4.10662294761919,2.19055400579804,0.569003702859245,5.36968009265725,4.50830942692322,6.72049381889537,6.20647958936402,3.99774173374816,5.37510565556187,4.42830443938806,3.1399745568275,2.34454611451421,0,2.33583148002532,1.96558995113203,0.674586337154561,2.02860121388503,0.964708639009667,2.5462585178142,1.72617682470486,2.43202840162553,2.19649130550465,4.31304619582064,2.60498663367952,2.18426371180192,1.76805214562978,1.79397413521912,0.964887042726734,8.31389355749721,2.27389694124582,3.58522948172457,5.60158783058121,4.45911471748154,7.87279409976534,5.95109102215034,3.51240566144038,5.67486518782288,4.20782910332672,5.58091690301205,5.24362607090362,5.87128938344045,5.06271705035291,0,1.63171705145613,3.93411418415229,1.93155722413313,2.56880943980467,2.81308047821288,1.80328439914343,2.7771801992481,3.78609863299508,2.34263246577983,2.80050417052639,2.38968797952552,2.22798674082394,1.41538265394416,1.21443210502468,3.21481443702443,2.37172666767914,4.17717711348349,3.40656204499845,2.13678724400706,3.09485222771795,3.46437258242324,1.32745138339963,2.18502572539483,1.209294227859,2.82907619633847,1.77181135728464,4.61152721915891,2.58428293168221,2.18120237686503,2.13898427030833,3.47640433729398,1.05418608574999,0,3.06395645178409,2.52085531643834,0.517434735131018,3.42939256050548,4.61084607469911,3.21063871683727,3.45552943264454,2.43571959291679,2.81606049676452,1.48282449604674,3.52845436887939,3.95727007059552,4.03661066739764,3.79971427047382,3.9392873521035,3.28281799490123,1.7488850197791,3.15223013417866,3.2465467351592,4.12773735926445,2.22233432843654,1.50694765603753,3.41735569302563,2.74533807847827,7.9889862097112,6.57771825921193,8.29199842826543,0.954670618015114,3.79603192297362,4.67634774391752,2.59212817972323,2.71814784818809,2.40198820120795,2.15782954215713,2.0663363931334,1.83229159388821,2.07383957266869,0.621339313086926,6.20062232552609,2.8408143748356,1.82004339502807,2.91676782516071,3.22899558694328,1.85851738039856,2.34714477291508,1.95306577265925,1.36317147753424,3.14059357073808,3.16833006883652,21.1727450820879,1.62180172232131,3.80030541509861,6.49604114888975,11.6367352183863,21.6562676711579,18.7504901251151,17.7227432609493,22.4145518884888,18.213426790545,20.871020323326,19.3941182672107,22.2249354189161,25.1285339690373,1.36038230169127,1.33191572024439,2.06341870201794,2.68615386182526,2.89784391048286,2.064507229963,3.11357761254351,2.78678892802786,1.00314420807073,3.95326289831947,2.76195141904306,0.572895513439397,2.92150409984269,1.37016503954128,1.5107877947794,2.70009000092722,5.85417564191487,2.71885445390523,0.51776031175182,2.17953429926771,2.39414924040619,3.92687293234509,5.34834777550247,1.46729213839588,1.47074806760011,4.00044110042907,2.67845574410562,2.56735367673452,2.77966932940177,3.04175159868288,4.33840585187975,3.183811253976,3.84150914429216,3.27382173046996,5.23923060411381,2.31768651889711,2.89363830695558,2.88460130562315,4.26876868389752,4.80016953339582,3.19456451086807,2.14592570952589,3.77900683244054,3.3879376949519,2.5384382367503,4.20734337607377,2.63069711437843,2.98769050460896,6.17256498823512,2.72860541685601,2.56111654176465,2.86461730218783,2.63392630016142,2.70069255373598,2.49810577937946,3.50897412668113,3.22306581072447,2.29545998482612,1.98532277207564,2.31867835620421
|short_description=p2@LOC100044170,p2@Xrcc4
}}
}}

Latest revision as of 00:02, 2 October 2015

Short description:p2@LOC100044170, p2@Xrcc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_LOC100044170_5end, CAGE_peak_2_at_Xrcc4_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 0bp_to_ENSMUST00000022115, NM_028012, uc007rjn.2_5end
EntrezGene:100044170,108138
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@LOC100044170p2@Xrcc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.97
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.46
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.53
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.54
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D94.39
Mouse Schwann, donor2.CNhs12573.11746-123F93.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H913.46
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.30
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H29.83
forelimb, embryo E13.CNhs10589.384-1E27.74
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C86.10
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G17.55
heart, neonate N16.CNhs11209.782-15G13.49
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F85.37
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I26.72
kidney, embryo E18.CNhs11001.1288-20C76.21
kidney, neonate N00.CNhs11214.646-21G74.00
kidney, neonate N10.CNhs11206.758-6D55.38
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B18.31
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E55.67
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A45.24
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H33.80
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.29
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B521.17
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C111.64
thymus, embryo E18.CNhs10595.1273-19G421.66
thymus, neonate N02.CNhs11181.1541-43F818.75
thymus, neonate N03.CNhs11137.2104-43C717.72
thymus, neonate N06.CNhs11197.681-26C422.41
thymus, neonate N07.CNhs11211.713-19D318.21
thymus, neonate N10.CNhs11194.748-24E420.87
thymus, neonate N20.CNhs11186.820-7A219.39
thymus, neonate N25.CNhs11125.1362-25G722.22
thymus, neonate N30.CNhs11132.1393-42G225.13
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:90229161..90229221,-&oldid=4329265"