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FFCP PHASE1:Mm9::chr2:124436014..124436021,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:124436014..124436021,+
|DHSsupport=NA
|short_description=p6@Sema6d
|DPIdataset=NA
|description=CAGE_peak_6_at_Sema6d_5end
|association_with_transcript=-10bp_to_ENSMUST00000051419,ENSMUST00000076335,ENSMUST00000077847,ENSMUST00000078621,NM_172537,NM_199238,NM_199239,NM_199240,NM_199241,uc008mbn.1,uc008mbo.1,uc008mbp.1,uc008mbq.1,uc008mbr.2,uc008mbs.2,uc008mbt.2_5end
|EntrezGene=214968
|EntrezGene=214968
|HGNC=
|HGNC=
|MCL_coexpression_id=2283
|TSSclassifier=NA
|UniProt=Q76KF0,A2AW76,A2AW75,A2AW74,A2AW73
|UniProt=Q76KF0,A2AW76,A2AW75,A2AW74,A2AW73
|association_with_transcript=-10bp_to_ENSMUST00000051419,ENSMUST00000076335,ENSMUST00000077847,ENSMUST00000078621,NM_172537,NM_199238,NM_199239,NM_199240,NM_199241,uc008mbn.1,uc008mbo.1,uc008mbp.1,uc008mbq.1,uc008mbr.2,uc008mbs.2,uc008mbt.2_5end
|cluster_id=chr2:124436014..124436021,+
|description=CAGE_peak_6_at_Sema6d_5end
|id=chr2:124436014..124436021,+
|ontology_enrichment_celltype=CL:0000117!1.41e-10!23;CL:0000337!1.41e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-18,23;CL:0000337,1.45e-18,23;CL:0000540,4.86e-13,33;CL:0000047,4.86e-13,33;CL:0000031,4.86e-13,33;CL:0000404,4.86e-13,33;CL:0002609,9.62e-12,6;CL:0002319,2.06e-11,43;CL:0000221,5.00e-11,44;CL:0000133,5.00e-11,44;CL:0000393,2.88e-10,39;CL:0000211,2.88e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.65e-12!52;UBERON:0005068!3.65e-12!52;UBERON:0006241!3.65e-12!52;UBERON:0007135!3.65e-12!52;UBERON:0001017!3.98e-12!73;UBERON:0005743!3.98e-12!73;UBERON:0000073!1.34e-11!75;UBERON:0001016!1.34e-11!75;UBERON:0000955!5.80e-10!50;UBERON:0006238!5.80e-10!50;UBERON:0002616!1.32e-09!49;UBERON:0004121!3.79e-09!102;UBERON:0000924!3.79e-09!102;UBERON:0006601!3.79e-09!102;UBERON:0000033!6.72e-09!63;UBERON:0002020!6.13e-08!34;UBERON:0003080!1.08e-07!40;UBERON:0002346!2.61e-07!71;UBERON:0003075!2.61e-07!71;UBERON:0007284!2.61e-07!71;UBERON:0002780!3.20e-07!39;UBERON:0001890!3.20e-07!39;UBERON:0006240!3.20e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.10e-15,73;UBERON:0001016,2.59e-14,75;UBERON:0000073,1.40e-12,54;UBERON:0001049,5.91e-12,52;UBERON:0005068,5.91e-12,52;UBERON:0006241,5.91e-12,52;UBERON:0007135,5.91e-12,52;UBERON:0004121,2.76e-11,95;UBERON:0000924,2.76e-11,95;UBERON:0006601,2.76e-11,95;UBERON:0002346,1.49e-08,64;UBERON:0003075,1.49e-08,64;UBERON:0007284,1.49e-08,64;UBERON:0010371,1.90e-08,73;UBERON:0002020,2.33e-08,34;UBERON:0003076,3.07e-08,12;UBERON:0003057,3.07e-08,12;UBERON:0002616,6.89e-08,46;UBERON:0000955,1.27e-07,47;UBERON:0006238,1.27e-07,47;UBERON:0002240,4.28e-07,6;UBERON:0005174,4.28e-07,6;UBERON:0001137,4.28e-07,6
|phase1_expression=1.44133962394315,0.697950815278722,0,2.11724947914781,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0.137114433605739,0,0.255129870453209,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0,0.430942465371778,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0,1.43752564364972,0.167782606057736,0,0,0,0.573066879877513,0.515672092277442,1.21389876515759,2.11596391708813,1.26766280701236,0.338844532069132,0,0,0,0,0.898800331555214,1.92109152660777,12.1316846400919,10.5304631898719,10.7265730289205,1.14260393761521,0.883474163806454,3.30725157880376,2.97120960156533,3.67687514644008,0,1.27687338085188,2.15049146558741,0.923204014111357,0.914876436024097,2.6045668527838,1.11673199600552,0,0.763991238884051,2.94628585473668,1.85083185038834,3.91438836233131,0.151452386666368,0.151143120213571,2.6087803983151,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0,0.220841518460394,0,0,5.5628351432194,4.60782754989601,0.255457055208591,0,0,0,1.79748767285787,1.83000241127451,0.753926112677186,0.869121600961382,0.255715457330331,1.24672826735736,1.62241263067758,0.101839363850316,0.373220911830279,0,0,0.260240885925407,0,0.540186389416048,0,0.816437989815934,0.512454881139399,0.843315521037559,0,0,0.189106080167819,0.703804496655795,1.09597866213787,1.11218899690239,1.0447564995665,0.823128545631774,0,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.946978942340841,0.787056926989615,0.925602677324269,0.465067889500816,0.536546802799238,0.116765342367169,0.329119699826961,0.820837320395476,0.648550476366846,0.438599962275997,0.439100230582101,0.671032093801859,0.841159794256509,5.76265829323993,0.330418782983798,0.528901133327089,0.426576501070468,0.696710015581316,0.515469845288373,0.605050573870028,0.889512175379481,0.760902504450237,0,1.15289268306808,1.75934646160189,1.59165177632921,0.974820435595601,0,0.432276099749388,0.199141273254367,0,0,0,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.616985819609003,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.810676133875177,0.549122826376163,0,0.744281895337007,0,0,0,0,0,0.757965647081939,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0,0.195133647857799,0.630540576424764,0.664394068946325,0.478364305972461,0,0.172684981865896,0.144649058581512,0,0,0,0.551873492609465,0.963303539926752,1.28932855251423,0,0.504941854408746,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.567760340833074,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,1.03486947026204,0.643011105094777,0.709360934569094,0.356737635204141,0.822745103010605,0.304464949114599,0.23467170806371,0.21183207086382,0,0.32977250588296,1.29171541356724,0.72375509913787,0.596861720015682,0.328281799490123,0,1.29797711407357,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.686334519619568,0.169978429993855,0.279902904647316,0.414599921413271,0,0.158167996790568,0.406638934253697,0.324016022465404,0,0.218362563746178,0,0.330613822901344,0.26175594198403,0.518459893167171,0,0,0.598066184175915,0.165458490457098,0.583353565032143,0.129159823477731,0.337912250981556,0.58678619322877,0.13020438484395,0.314578033277133,0,0,0,1.82452693761148,1.64337531463724,0.77952493786677,1.43221356533985,0.596044064343795,1.20195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.302478555410522,0.584747284438515,0.192423683280659,0.116876902181569,1.13365191807606,0,0,0,0.19318959403219,0.750729901804728,0,0,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0.453142408984205,1.03552062350364,1.14166082342594,2.39414924040619,1.36586884603307,0.486213434136588,1.04806581313991,0.735374033800057,0.666740183404846,1.03017528619447,0,0.505394423527595,1.2673964994512,0.377252682772152,0.842773567228942,0.704276676453562,0.459483751644906,0.952587382566147,0.695305955669133,0.964546102318525,0,0.441596760403192,0.685738504770831,1.06485483695602,0.476872379894642,0.581385666529314,0.658765662907314,0.930760686808441,1.09756783723664,0.263069711437843,0.679020569229309,1.12228454331548,0.830445126869219,0.788035859004508,1.22769312950907,1.08455788830176,1.35034627686799,0.749431733813838,0.467863216890817,1.07435527024149,0.57386499620653,0.441182838239031,0.231867835620421
|phase1_expression=1.44133962394315,0.697950815278722,0,2.11724947914781,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0.137114433605739,0,0.255129870453209,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0,0.430942465371778,0.760093677825496,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0,1.43752564364972,0.167782606057736,0,0,0,0.573066879877513,0.515672092277442,1.21389876515759,2.11596391708813,1.26766280701236,0.338844532069132,0,0,0,0,0.898800331555214,1.92109152660777,12.1316846400919,10.5304631898719,10.7265730289205,1.14260393761521,0.883474163806454,3.30725157880376,2.97120960156533,3.67687514644008,0,1.27687338085188,2.15049146558741,0.923204014111357,0.914876436024097,2.6045668527838,1.11673199600552,0,0.763991238884051,2.94628585473668,1.85083185038834,3.91438836233131,0.151452386666368,0.151143120213571,2.6087803983151,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0,0.220841518460394,0,0,5.5628351432194,4.60782754989601,0.255457055208591,0,0,0,1.79748767285787,1.83000241127451,0.753926112677186,0.869121600961382,0.255715457330331,1.24672826735736,1.62241263067758,0.101839363850316,0.373220911830279,0,0,0.260240885925407,0,0.540186389416048,0,0.816437989815934,0.512454881139399,0.843315521037559,0,0,0.189106080167819,0.703804496655795,1.09597866213787,1.11218899690239,1.0447564995665,0.823128545631774,0,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.946978942340841,0.787056926989615,0.925602677324269,0.465067889500816,0.536546802799238,0.116765342367169,0.329119699826961,0.820837320395476,0.648550476366846,0.438599962275997,0.439100230582101,0.671032093801859,0.841159794256509,5.76265829323993,0.330418782983798,0.528901133327089,0.426576501070468,0.696710015581316,0.515469845288373,0.605050573870028,0.889512175379481,0.760902504450237,0,1.15289268306808,1.75934646160189,1.59165177632921,0.974820435595601,0,0.432276099749388,0.199141273254367,0,0,0,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.616985819609003,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.810676133875177,0.549122826376163,0,0.744281895337007,0,0,0,0,0,0.757965647081939,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0,0.195133647857799,0.630540576424764,0.664394068946325,0.478364305972461,0,0.172684981865896,0.144649058581512,0,0,0,0.551873492609465,0.963303539926752,1.28932855251423,0,0.504941854408746,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.567760340833074,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,1.03486947026204,0.643011105094777,0.709360934569094,0.356737635204141,0.822745103010605,0.304464949114599,0.23467170806371,0.21183207086382,0,0.32977250588296,1.29171541356724,0.72375509913787,0.596861720015682,0.328281799490123,0,1.29797711407357,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.686334519619568,0.169978429993855,0.279902904647316,0.414599921413271,0,0.158167996790568,0.406638934253697,0.324016022465404,0,0.218362563746178,0,0.330613822901344,0.26175594198403,0.518459893167171,0,0,0.598066184175915,0.165458490457098,0.583353565032143,0.129159823477731,0.337912250981556,0.58678619322877,0.13020438484395,0.314578033277133,0,0,0,1.82452693761148,1.64337531463724,0.77952493786677,1.43221356533985,0.596044064343795,1.20195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.302478555410522,0.584747284438515,0.192423683280659,0.116876902181569,1.13365191807606,0,0,0,0.19318959403219,0.750729901804728,0,0,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0.453142408984205,1.03552062350364,1.14166082342594,2.39414924040619,1.36586884603307,0.486213434136588,1.04806581313991,0.735374033800057,0.666740183404846,1.03017528619447,0,0.505394423527595,1.2673964994512,0.377252682772152,0.842773567228942,0.704276676453562,0.459483751644906,0.952587382566147,0.695305955669133,0.964546102318525,0,0.441596760403192,0.685738504770831,1.06485483695602,0.476872379894642,0.581385666529314,0.658765662907314,0.930760686808441,1.09756783723664,0.263069711437843,0.679020569229309,1.12228454331548,0.830445126869219,0.788035859004508,1.22769312950907,1.08455788830176,1.35034627686799,0.749431733813838,0.467863216890817,1.07435527024149,0.57386499620653,0.441182838239031,0.231867835620421
|short_description=p6@Sema6d
}}
}}

Latest revision as of 15:36, 25 September 2015

Short description:p6@Sema6d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Sema6d_5end
Coexpression cluster:MCL_coexpression_mm9:2283
Association with transcript: -10bp_to_ENSMUST00000051419, ENSMUST00000076335, ENSMUST00000077847, ENSMUST00000078621, NM_172537, NM_199238, NM_199239, NM_199240, NM_199241, uc008mbn.1, uc008mbo.1, uc008mbp.1, uc008mbq.1, uc008mbr.2, uc008mbs.2, uc008mbt.2_5end
EntrezGene:Sema6d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Sema6d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.13
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system6.10e-1573
nervous system2.59e-1475
regional part of nervous system1.40e-1254
neural tube5.91e-1252
neural rod5.91e-1252
future spinal cord5.91e-1252
neural keel5.91e-1252
ectoderm-derived structure2.76e-1195
ectoderm2.76e-1195
presumptive ectoderm2.76e-1195
neurectoderm1.49e-0864
neural plate1.49e-0864
presumptive neural plate1.49e-0864
ecto-epithelium1.90e-0873
gray matter2.33e-0834
posterior neural tube3.07e-0812
chordal neural plate3.07e-0812
regional part of brain6.89e-0846
brain1.27e-0747
future brain1.27e-0747
spinal cord4.28e-076
dorsal region element4.28e-076
dorsum4.28e-076
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