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(Created page with "{{f5samples |id=FF:10015-101C6 |name=esophagus, adult, pool1 |sample_id=10015 |rna_tube_id=101C6 |rna_box=101 |rna_position=C6 |sample_cell_lot=NA |sample_cell_catalog...")
 
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{{f5samples
{{f5samples
|id=FF:10015-101C6
|DRA_sample_Accession=CAGE@SAMD00004818
|name=esophagus, adult, pool1
|accession_numbers=CAGE;DRX008649;DRR009521;DRZ000946;DRZ002331;DRZ012296;DRZ013681
|sample_id=10015
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001043,UBERON:0002100,UBERON:0000479,UBERON:0001007,UBERON:0004119,UBERON:0011216,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0005178,UBERON:0005177,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0001555,UBERON:0001041,UBERON:0002224,UBERON:0000915
|rna_tube_id=101C6
|rna_box=101
|rna_position=C6
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Ambion
|rna_lot_number=0910061 -6
|rna_catalog_number=Cat:AM6000 Lot:0910061 -6
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=68,74,75 years old adult
|sample_tissue=esophagus
|sample_donor(cell lot)=3 pool
|sample_sex=mixed
|sample_age=
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0
|rna_weight_ug=10.00000
|rna_concentration=
|sample_note=
|profile_hcage=CNhs10620,LSID656,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000915,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0001007,UBERON:0001041,UBERON:0001043,UBERON:0001062,UBERON:0001555,UBERON:0002050,UBERON:0002224,UBERON:0002532,UBERON:0003104,UBERON:0004119,UBERON:0004120,UBERON:0004185,UBERON:0004921,UBERON:0005178,UBERON:0005181,UBERON:0005423,UBERON:0007023,UBERON:0007026,UBERON:0009142,UBERON:0009143
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010015
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr4:57547454..57547469,-!p1@HOPX!2.70!498.43!HOPX;;chr5:134369879..134369898,-!p2@PITX1!2.47!295.33!PITX1;;chr11:34642612..34642646,+!p1@EHF!2.44!277.10!EHF;;chr17:80797886..80797906,-!p1@ZNF750!2.28!190.00!ZNF750;;chr14:37131058..37131139,+!p1@PAX9!2.11!126.57!PAX9;;chr5:134369905..134369972,-!p1@PITX1!2.04!162.46!PITX1;;chr1:201979743..201979762,+!p1@ELF3!2.00!98.44!ELF3;;chr1:201979703..201979721,+!p2@ELF3!1.91!80.89!ELF3;;chr11:129245526..129245553,+!p1@BARX2!1.89!76.72!BARX2;;chr15:101069113..101069169,-!p1@CERS3!1.85!69.35!CERS3;;chr1:209979467..209979494,-!p1@IRF6!1.84!76.91!IRF6;;chr6:134210243..134210257,+!p1@TCF21!1.84!67.89!TCF21;;chr1:24645832..24645853,+!p1@GRHL3!1.83!66.92!GRHL3;;chr3:189507432..189507459,+!p1@TP63!1.78!59.45!TP63;;chr17:7493405..7493419,-!p1@SOX15!1.76!56.54!SOX15;;chr19:46801639..46801699,+!p1@HIF3A!1.71!50.53!HIF3A;;chr20:62680984..62680999,-!p1@SOX18!1.70!64.79!SOX18;;chr2:70142232..70142251,+!p1@MXD1!1.65!232.68!MXD1;;chr11:65554528..65554546,+!p1@OVOL1!1.65!43.35!OVOL1;;chr17:53342311..53342400,+!p1@HLF!1.64!48.49!HLF;;chr1:24645921..24645973,+!p2@GRHL3!1.63!41.61!GRHL3;;chr15:42749722..42749739,-!p2@ZFP106!1.60!67.89!ZFP106;;chr16:86544113..86544145,+!p1@FOXF1!1.60!47.43!FOXF1;;chr8:10588010..10588030,-!p1@SOX7!1.59!37.83!SOX7;;chr18:45663490..45663528,-!p2@ZBTB7C!1.59!37.63!ZBTB7C;;chr11:34642656..34642667,+!p2@EHF!1.59!37.53!EHF;;chr13:73633131..73633149,+!p1@KLF5!1.58!378.74!KLF5;;chr12:54785074..54785122,-!p2@ZNF385A!1.48!43.94!ZNF385A;;chr4:174451370..174451387,-!p1@HAND2!1.47!28.81!HAND2;;chr6:1389789..1389821,+!p1@FOXF2!1.46!37.83!FOXF2;;chr11:129245736..129245758,+!p2@BARX2!1.42!25.31!BARX2;;chr11:111249993..111250006,-!p1@POU2AF1!1.42!25.22!POU2AF1;;chr8:55370487..55370503,+!p1@SOX17!1.42!25.22!SOX17;;chr2:10091815..10091864,+!p1@GRHL1!1.41!32.20!GRHL1;;chr3:181429704..181429722,+!p1@SOX2!1.40!23.96!SOX2;;chr6:10415276..10415341,-!p2@TFAP2A!1.39!28.71!TFAP2A;;chr1:209979411..209979433,-!p2@IRF6!1.39!23.76!IRF6;;chr1:6479968..6479986,-!p1@HES2!1.38!22.89!HES2;;chr12:52437488..52437507,+!p2@NR4A1!1.37!22.21!NR4A1;;chr20:55204351..55204377,+!p1@TFAP2C!1.36!27.54!TFAP2C;;chr2:19558373..19558392,-!p1@OSR1!1.35!58.00!OSR1;;chr21:38071430..38071456,+!p1@SIM2!1.34!20.85!SIM2;;chr22:38380543..38380569,-!p1@SOX10!1.31!19.49!SOX10;;chr4:174450089..174450153,-!p2@HAND2!1.30!18.91!HAND2;;chr12:54785054..54785072,-!p4@ZNF385A!1.29!20.95!ZNF385A;;chr19:9811347..9811351,-!p1@ZNF812!1.28!17.94!ZNF812;;chr8:102504651..102504683,+!p1@GRHL2!1.25!16.59!GRHL2;;chr17:80797863..80797874,-!p2@ZNF750!1.24!16.20!ZNF750;;chr21:39870339..39870443,-!p1@ERG!1.23!16.00!ERG;;chr6:106534192..106534224,+!p1@PRDM1!1.22!43.45!PRDM1;;chr17:7492684..7492778,-!p2@SOX15!1.21!31.62!SOX15;;chr11:113930425..113930471,+!p1@ZBTB16!1.21!22.02!ZBTB16;;chr16:85932760..85932775,+!p1@IRF8!1.19!14.55!IRF8;;chr2:122042770..122042785,-!p1@TFCP2L1!1.16!13.58!TFCP2L1;;chr11:47400078..47400106,-!p1@SPI1!1.16!13.58!SPI1;;chr12:52445218..52445237,+!p1@NR4A1!1.15!163.81!NR4A1;;chr6:126240380..126240430,+!p2@NCOA7!1.14!33.36!NCOA7;;chr6:391743..391759,+!p1@IRF4!1.14!12.90!IRF4;;chr7:27170359..27170381,-!p1@HOXA4!1.14!12.80!HOXA4;;chr19:45908292..45908374,-!p1@PPP1R13L!1.13!110.57!PPP1R13L;;chr16:79634624..79634642,-!p1@MAF!1.11!46.75!MAF;;chr2:70314240..70314256,+!p4@PCBP1!1.11!24.44!PCBP1;;chr1:61548225..61548299,+!p1@NFIA!1.09!147.04!NFIA;;chr12:53625966..53626012,-!p2@RARG!1.09!29.78!RARG;;chr17:53344945..53344977,+!p2@HLF!1.09!11.44!HLF;;chr1:61548069..61548102,+!p3@NFIA!1.08!26.87!NFIA;;chr6:10412600..10412637,-!p1@TFAP2A!1.08!18.43!TFAP2A;;chr1:40105299..40105326,-!p1@HEYL!1.08!11.15!HEYL;;chr1:40367668..40367684,-!p2@MYCL1!1.08!10.96!MYCL1;;chr15:67458861..67458879,+!p17@SMAD3!1.08!10.96!SMAD3;;chr3:169381420..169381535,-!p1@MECOM!1.07!12.71!MECOM;;chr17:26833339..26833378,+!p1@FOXN1!1.07!10.86!FOXN1;;chr1:61548374..61548415,+!p4@NFIA!1.06!19.49!NFIA;;chr1:170632285..170632309,+!p1@PRRX1!1.06!12.03!PRRX1;;chrY:21906594..21906622,-!p1@KDM5D!1.06!10.47!KDM5D;;chr6:106534230..106534254,+!p2@PRDM1!1.05!26.28!PRDM1;;chrX:56258900..56258917,+!p4@KLF8!1.05!10.28!KLF8;;chr7:15726296..15726315,-!p1@MEOX2!1.05!10.18!MEOX2;;chr11:113930291..113930339,+!p2@ZBTB16!1.04!16.59!ZBTB16;;chr11:65554563..65554576,+!p2@OVOL1!1.04!10.09!OVOL1;;chr10:64018918..64018936,+!p2@ZNF365!1.04!9.89!ZNF365;;chr11:34645791..34645836,+!p3@EHF!1.04!9.89!EHF;;chr3:181429741..181429767,+!p2@SOX2!1.03!9.80!SOX2;;chr2:145277882..145277967,-!p3@ZEB2!1.01!16.20!ZEB2;;chr1:164528410..164528428,+!p1@PBX1!1.00!68.77!PBX1;;chr20:51588873..51588953,+!p1@TSHZ2!1.00!11.93!TSHZ2;;chr6:126240442..126240459,+!p4@NCOA7!1.00!11.44!NCOA7;;chr17:38256822..38256851,-!p1@NR1D1!0.99!70.12!NR1D1;;chr8:102504979..102505010,+!p2@GRHL2!0.99!8.73!GRHL2;;chr2:68592406..68592424,+!p1@PLEK!0.99!8.73!PLEK;;chr20:39317868..39317884,-!p1@MAFB!0.98!104.85!MAFB;;chr15:60884706..60884743,-!p1@RORA!0.98!45.20!RORA;;chr6:19837592..19837621,+!p1@ID4!0.97!52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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001043;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005181
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0009143,UBERON:0010316
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Line 67: Line 41:
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|rna_box=101
|rna_catalog_number=Cat:AM6000 Lot:0910061 -6
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0
|rna_lot_number=0910061 -6
|rna_od260/230=
|rna_od260/280=
|rna_position=C6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=101C6
|rna_weight_ug=10
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Ambion
|sample_description=
|sample_dev_stage=68,74,75 years old adult
|sample_disease=normal
|sample_donor(cell lot)=3 pool
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.85475130521142e-212!GO:0005737;cytoplasm;6.96772342161866e-201!GO:0043226;organelle;1.89459286970536e-137!GO:0043229;intracellular organelle;5.97308249496059e-137!GO:0044444;cytoplasmic part;2.79201585554737e-122!GO:0043227;membrane-bound organelle;4.64309283074463e-113!GO:0043231;intracellular membrane-bound organelle;5.16812550235356e-113!GO:0005515;protein binding;6.80264073837601e-111!GO:0044422;organelle part;3.06621518866995e-92!GO:0044446;intracellular organelle part;1.21119687940305e-90!GO:0032991;macromolecular complex;3.93873369093116e-73!GO:0030529;ribonucleoprotein complex;1.74870572340412e-52!GO:0044238;primary metabolic process;5.96694630710541e-48!GO:0044237;cellular metabolic process;1.63230989125024e-47!GO:0016043;cellular component organization and biogenesis;2.92687684745557e-46!GO:0043170;macromolecule metabolic process;1.19957538139759e-44!GO:0019538;protein metabolic process;4.58943968437329e-43!GO:0043233;organelle lumen;4.58943968437329e-43!GO:0031974;membrane-enclosed lumen;4.58943968437329e-43!GO:0005739;mitochondrion;9.25306725569152e-43!GO:0003723;RNA binding;5.00458201035576e-42!GO:0043234;protein complex;7.95520064740941e-41!GO:0044428;nuclear part;7.90075982007952e-39!GO:0005829;cytosol;1.76295067287279e-38!GO:0044260;cellular macromolecule metabolic process;1.18293346438026e-36!GO:0033036;macromolecule localization;1.40750469398607e-36!GO:0015031;protein transport;3.21131047711293e-36!GO:0044267;cellular protein metabolic process;1.31483542467857e-35!GO:0031090;organelle membrane;3.22806633012649e-35!GO:0005634;nucleus;5.59231546712976e-35!GO:0008104;protein localization;1.85307975958219e-34!GO:0045184;establishment of protein localization;2.4438877849386e-34!GO:0043228;non-membrane-bound organelle;4.01481885749095e-34!GO:0043232;intracellular non-membrane-bound organelle;4.01481885749095e-34!GO:0005840;ribosome;8.65236996528301e-34!GO:0006412;translation;2.30391120081117e-32!GO:0044429;mitochondrial part;1.30115638865653e-31!GO:0065003;macromolecular complex assembly;6.0163579471992e-30!GO:0003735;structural constituent of ribosome;1.10064457958979e-29!GO:0031967;organelle envelope;2.0793201220884e-29!GO:0022607;cellular component assembly;2.81009987403912e-29!GO:0031975;envelope;3.82892640472404e-29!GO:0033279;ribosomal subunit;2.94120499831065e-27!GO:0046907;intracellular transport;2.01335470156618e-26!GO:0016071;mRNA metabolic process;2.24987250317966e-24!GO:0006886;intracellular protein transport;4.65243750208546e-24!GO:0008380;RNA splicing;6.67989961053764e-24!GO:0009058;biosynthetic process;1.09168856939759e-23!GO:0031981;nuclear lumen;2.89219689757616e-23!GO:0006396;RNA processing;4.98320560234947e-23!GO:0009059;macromolecule biosynthetic process;6.10471911340494e-23!GO:0006996;organelle organization and biogenesis;1.69105622133587e-22!GO:0044249;cellular biosynthetic process;4.86878659861107e-22!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.76018491001665e-21!GO:0005740;mitochondrial envelope;7.68172088389822e-21!GO:0008134;transcription factor binding;1.14507344708837e-20!GO:0006397;mRNA processing;1.20270063333332e-20!GO:0031966;mitochondrial membrane;3.02594710393463e-20!GO:0019866;organelle inner membrane;3.75281784956574e-20!GO:0048770;pigment granule;4.40705475744855e-20!GO:0042470;melanosome;4.40705475744855e-20!GO:0044445;cytosolic part;6.21464862540964e-20!GO:0005783;endoplasmic reticulum;3.50654853182352e-19!GO:0005743;mitochondrial inner membrane;7.47428827976827e-19!GO:0043283;biopolymer metabolic process;8.42769794050906e-19!GO:0006119;oxidative phosphorylation;7.02869204235242e-18!GO:0051641;cellular localization;1.36427569803991e-17!GO:0051649;establishment of cellular localization;1.37254831809341e-17!GO:0008092;cytoskeletal protein binding;2.85696743780699e-17!GO:0010467;gene expression;3.87406365669682e-17!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.24199471396446e-17!GO:0005681;spliceosome;1.13482268766437e-16!GO:0015935;small ribosomal subunit;1.58930993793601e-15!GO:0000166;nucleotide binding;1.58930993793601e-15!GO:0048523;negative regulation of cellular process;4.72177736502672e-15!GO:0005654;nucleoplasm;4.85991584584416e-15!GO:0044455;mitochondrial membrane part;1.1961693517172e-14!GO:0031980;mitochondrial lumen;1.19948469221998e-14!GO:0005759;mitochondrial matrix;1.19948469221998e-14!GO:0005746;mitochondrial respiratory chain;2.46405744684649e-14!GO:0022618;protein-RNA complex assembly;2.53523670982611e-14!GO:0012505;endomembrane system;3.59098576151625e-14!GO:0016192;vesicle-mediated transport;3.93655920072678e-14!GO:0048519;negative regulation of biological process;6.92624887046568e-14!GO:0012501;programmed cell death;1.3457948132679e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.64500592451038e-13!GO:0005794;Golgi apparatus;1.70072586408512e-13!GO:0006457;protein folding;1.84093074727557e-13!GO:0006915;apoptosis;1.84695868787645e-13!GO:0016462;pyrophosphatase activity;2.31647385278242e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.38288614828169e-13!GO:0017111;nucleoside-triphosphatase activity;2.86599132406631e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;3.48693222420023e-13!GO:0006461;protein complex assembly;3.72237662015294e-13!GO:0044451;nucleoplasm part;4.19424814699563e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;7.07106301870719e-13!GO:0008219;cell death;7.47355547614962e-13!GO:0016265;death;7.47355547614962e-13!GO:0015934;large ribosomal subunit;7.71668538790583e-13!GO:0003712;transcription cofactor activity;8.10270343834247e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.12549208872662e-12!GO:0003954;NADH dehydrogenase activity;1.12549208872662e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.12549208872662e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.13079610401428e-12!GO:0044265;cellular macromolecule catabolic process;1.18817689931694e-12!GO:0019941;modification-dependent protein catabolic process;1.34346987384092e-12!GO:0043632;modification-dependent macromolecule catabolic process;1.34346987384092e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.89796807872807e-12!GO:0044257;cellular protein catabolic process;2.50682667315002e-12!GO:0048193;Golgi vesicle transport;2.81524522081521e-12!GO:0006605;protein targeting;3.44337732786035e-12!GO:0008135;translation factor activity, nucleic acid binding;3.60590450611523e-12!GO:0000502;proteasome complex (sensu Eukaryota);6.02051585665708e-12!GO:0006512;ubiquitin cycle;7.69465749214039e-12!GO:0017076;purine nucleotide binding;1.03082354012186e-11!GO:0006366;transcription from RNA polymerase II promoter;1.54381056991937e-11!GO:0030036;actin cytoskeleton organization and biogenesis;1.94099810184105e-11!GO:0043412;biopolymer modification;2.45257885603065e-11!GO:0032553;ribonucleotide binding;2.91656402612461e-11!GO:0032555;purine ribonucleotide binding;2.91656402612461e-11!GO:0016874;ligase activity;3.29723503420216e-11!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.61127059914339e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.82708683729199e-11!GO:0003779;actin binding;6.09200594149393e-11!GO:0044432;endoplasmic reticulum part;7.30632170384142e-11!GO:0030964;NADH dehydrogenase complex (quinone);9.08717998285535e-11!GO:0045271;respiratory chain complex I;9.08717998285535e-11!GO:0005747;mitochondrial respiratory chain complex I;9.08717998285535e-11!GO:0043687;post-translational protein modification;9.27802016599585e-11!GO:0006464;protein modification process;1.06716517277736e-10!GO:0042775;organelle ATP synthesis coupled electron transport;1.18735145032818e-10!GO:0042773;ATP synthesis coupled electron transport;1.18735145032818e-10!GO:0030029;actin filament-based process;1.90827190701041e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.1646161706355e-10!GO:0044248;cellular catabolic process;2.74104139175757e-10!GO:0015629;actin cytoskeleton;7.46404916529049e-10!GO:0005761;mitochondrial ribosome;8.38957492571327e-10!GO:0000313;organellar ribosome;8.38957492571327e-10!GO:0003743;translation initiation factor activity;8.50170806506908e-10!GO:0003924;GTPase activity;9.54916426185061e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.00214529790044e-09!GO:0009055;electron carrier activity;1.33330084537936e-09!GO:0051082;unfolded protein binding;1.61015490890688e-09!GO:0043285;biopolymer catabolic process;1.98114000343166e-09!GO:0031988;membrane-bound vesicle;2.05524500572498e-09!GO:0030163;protein catabolic process;2.0840227003008e-09!GO:0006446;regulation of translational initiation;2.25459038251837e-09!GO:0006413;translational initiation;2.56416476613425e-09!GO:0031982;vesicle;2.57301026421984e-09!GO:0005856;cytoskeleton;2.57301026421984e-09!GO:0016564;transcription repressor activity;2.65712865104467e-09!GO:0051186;cofactor metabolic process;3.44914321033034e-09!GO:0009057;macromolecule catabolic process;3.84902316926428e-09!GO:0006913;nucleocytoplasmic transport;4.2479925224701e-09!GO:0005635;nuclear envelope;4.54339961515017e-09!GO:0016023;cytoplasmic membrane-bound vesicle;4.81604267955511e-09!GO:0008565;protein transporter activity;5.23575306400934e-09!GO:0050789;regulation of biological process;5.58351651824077e-09!GO:0005793;ER-Golgi intermediate compartment;6.58533664282697e-09!GO:0031410;cytoplasmic vesicle;9.01317568332226e-09!GO:0016604;nuclear body;9.78704899518572e-09!GO:0006259;DNA metabolic process;1.08792636687488e-08!GO:0051169;nuclear transport;1.18704896559545e-08!GO:0005768;endosome;1.22288911465197e-08!GO:0005730;nucleolus;1.40383045385115e-08!GO:0007264;small GTPase mediated signal transduction;1.60529586382907e-08!GO:0051246;regulation of protein metabolic process;1.62200885374839e-08!GO:0005525;GTP binding;2.86282873962648e-08!GO:0050794;regulation of cellular process;3.03982405304804e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;4.12064894428957e-08!GO:0000375;RNA splicing, via transesterification reactions;4.12064894428957e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.12064894428957e-08!GO:0016607;nuclear speck;6.90427702635501e-08!GO:0007010;cytoskeleton organization and biogenesis;7.60834352447779e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.22632002599734e-08!GO:0031324;negative regulation of cellular metabolic process;8.29404528813167e-08!GO:0045333;cellular respiration;8.44051181511447e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.51127923286257e-08!GO:0007049;cell cycle;8.9530158358248e-08!GO:0009060;aerobic respiration;9.48237734021425e-08!GO:0005789;endoplasmic reticulum membrane;9.60887932327109e-08!GO:0017038;protein import;9.84143696329172e-08!GO:0042802;identical protein binding;1.07721141959017e-07!GO:0042981;regulation of apoptosis;1.13960752264024e-07!GO:0009892;negative regulation of metabolic process;1.31747025657137e-07!GO:0006793;phosphorus metabolic process;1.39225563188034e-07!GO:0006796;phosphate metabolic process;1.39225563188034e-07!GO:0043067;regulation of programmed cell death;2.08016649685541e-07!GO:0008639;small protein conjugating enzyme activity;2.19492573954374e-07!GO:0032561;guanyl ribonucleotide binding;2.78998006760838e-07!GO:0019001;guanyl nucleotide binding;2.78998006760838e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.8565090712725e-07!GO:0016481;negative regulation of transcription;2.90751345943238e-07!GO:0031252;leading edge;2.91367056643738e-07!GO:0003714;transcription corepressor activity;3.46094098830682e-07!GO:0004842;ubiquitin-protein ligase activity;3.4856507713695e-07!GO:0031965;nuclear membrane;3.63149372367416e-07!GO:0019787;small conjugating protein ligase activity;4.33623608608794e-07!GO:0016310;phosphorylation;4.93073684962534e-07!GO:0030554;adenyl nucleotide binding;5.23989866174502e-07!GO:0003713;transcription coactivator activity;5.35328694768285e-07!GO:0006732;coenzyme metabolic process;5.58020943192498e-07!GO:0006099;tricarboxylic acid cycle;6.53670183530338e-07!GO:0046356;acetyl-CoA catabolic process;6.53670183530338e-07!GO:0043069;negative regulation of programmed cell death;7.35899931621957e-07!GO:0019899;enzyme binding;8.31670988029609e-07!GO:0043066;negative regulation of apoptosis;8.54157549030175e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.10527972617977e-06!GO:0032559;adenyl ribonucleotide binding;1.13886143880801e-06!GO:0048522;positive regulation of cellular process;1.15166444374724e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.15410057851796e-06!GO:0005524;ATP binding;1.22240577058329e-06!GO:0048475;coated membrane;1.254558266569e-06!GO:0030117;membrane coat;1.254558266569e-06!GO:0015986;ATP synthesis coupled proton transport;1.38841414451553e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.38841414451553e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.40348775856732e-06!GO:0019829;cation-transporting ATPase activity;1.55429901978946e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.79566328655039e-06!GO:0016491;oxidoreductase activity;2.36238939091072e-06!GO:0005912;adherens junction;2.46782905853155e-06!GO:0006950;response to stress;3.50687300523578e-06!GO:0030120;vesicle coat;3.53817044270223e-06!GO:0030662;coated vesicle membrane;3.53817044270223e-06!GO:0006916;anti-apoptosis;3.54796895865351e-06!GO:0051170;nuclear import;3.55383466090485e-06!GO:0065007;biological regulation;3.64363923566441e-06!GO:0006084;acetyl-CoA metabolic process;3.84128927358814e-06!GO:0006606;protein import into nucleus;4.41250812858829e-06!GO:0009109;coenzyme catabolic process;4.78368610197071e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;4.84101207712999e-06!GO:0015980;energy derivation by oxidation of organic compounds;4.95452820100279e-06!GO:0051187;cofactor catabolic process;5.26083846265978e-06!GO:0045786;negative regulation of progression through cell cycle;5.33668862591691e-06!GO:0051789;response to protein stimulus;5.51232815786085e-06!GO:0006986;response to unfolded protein;5.51232815786085e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.56993389075677e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.95394343707615e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.28352637726166e-06!GO:0016881;acid-amino acid ligase activity;7.03111065586699e-06!GO:0009150;purine ribonucleotide metabolic process;7.12228075581718e-06!GO:0048518;positive regulation of biological process;7.37318506985924e-06!GO:0006163;purine nucleotide metabolic process;8.08507285659592e-06!GO:0009141;nucleoside triphosphate metabolic process;8.38888651141086e-06!GO:0046034;ATP metabolic process;8.87131650718482e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.94552452578541e-06!GO:0009144;purine nucleoside triphosphate metabolic process;8.94552452578541e-06!GO:0048471;perinuclear region of cytoplasm;9.20186953252492e-06!GO:0030216;keratinocyte differentiation;9.37137050968637e-06!GO:0009199;ribonucleoside triphosphate metabolic process;9.58035724877479e-06!GO:0005770;late endosome;9.65096452530268e-06!GO:0009259;ribonucleotide metabolic process;9.8326166298932e-06!GO:0009056;catabolic process;9.87648978524128e-06!GO:0005773;vacuole;1.03839514987249e-05!GO:0016044;membrane organization and biogenesis;1.04425534334725e-05!GO:0044453;nuclear membrane part;1.04907794814434e-05!GO:0016563;transcription activator activity;1.19988228550153e-05!GO:0000074;regulation of progression through cell cycle;1.37246671146604e-05!GO:0006323;DNA packaging;1.38438508375099e-05!GO:0051726;regulation of cell cycle;1.65123629990381e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.69097690194068e-05!GO:0006091;generation of precursor metabolites and energy;1.81349346984033e-05!GO:0016070;RNA metabolic process;1.86356983651786e-05!GO:0045892;negative regulation of transcription, DNA-dependent;1.92344597353844e-05!GO:0007243;protein kinase cascade;2.64013390281683e-05!GO:0016887;ATPase activity;2.6649090742111e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.67182424532577e-05!GO:0003676;nucleic acid binding;2.74180686555997e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.76353756118348e-05!GO:0008361;regulation of cell size;2.7817095029752e-05!GO:0051128;regulation of cellular component organization and biogenesis;3.30069854160644e-05!GO:0045259;proton-transporting ATP synthase complex;3.36060491590697e-05!GO:0030133;transport vesicle;3.53740261535221e-05!GO:0016049;cell growth;3.61328522245848e-05!GO:0006754;ATP biosynthetic process;4.5366923995071e-05!GO:0006753;nucleoside phosphate metabolic process;4.5366923995071e-05!GO:0006333;chromatin assembly or disassembly;4.68188259189647e-05!GO:0000323;lytic vacuole;5.03305144314758e-05!GO:0005764;lysosome;5.03305144314758e-05!GO:0005798;Golgi-associated vesicle;5.03305144314758e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.03305144314758e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.03305144314758e-05!GO:0009142;nucleoside triphosphate biosynthetic process;5.45608745221107e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.45608745221107e-05!GO:0008307;structural constituent of muscle;5.57099588905168e-05!GO:0044440;endosomal part;6.84254275375319e-05!GO:0010008;endosome membrane;6.84254275375319e-05!GO:0022402;cell cycle process;7.24643004156886e-05!GO:0043566;structure-specific DNA binding;7.49210844950113e-05!GO:0005791;rough endoplasmic reticulum;7.70380314399724e-05!GO:0042623;ATPase activity, coupled;7.86595298242207e-05!GO:0009152;purine ribonucleotide biosynthetic process;7.89659781061929e-05!GO:0051276;chromosome organization and biogenesis;8.17305081941351e-05!GO:0006164;purine nucleotide biosynthetic process;8.45825932641661e-05!GO:0032446;protein modification by small protein conjugation;8.4780795503729e-05!GO:0044431;Golgi apparatus part;8.78355500786386e-05!GO:0006613;cotranslational protein targeting to membrane;8.86982977657824e-05!GO:0044449;contractile fiber part;9.08502809631296e-05!GO:0000245;spliceosome assembly;9.13382744365117e-05!GO:0042254;ribosome biogenesis and assembly;9.24710742004866e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.24710742004866e-05!GO:0006979;response to oxidative stress;0.000100247880412797!GO:0007242;intracellular signaling cascade;0.000106919020347754!GO:0001533;cornified envelope;0.00011986099112395!GO:0016567;protein ubiquitination;0.000125973832396268!GO:0007265;Ras protein signal transduction;0.00013138863900967!GO:0009260;ribonucleotide biosynthetic process;0.000135000374916169!GO:0016197;endosome transport;0.000136119799414053!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00014496889767449!GO:0005643;nuclear pore;0.000150713989859106!GO:0051427;hormone receptor binding;0.000165060998241784!GO:0030532;small nuclear ribonucleoprotein complex;0.000170984171796607!GO:0004298;threonine endopeptidase activity;0.000181249659912081!GO:0001558;regulation of cell growth;0.000189160105529044!GO:0065004;protein-DNA complex assembly;0.000203461123279887!GO:0005913;cell-cell adherens junction;0.000209619167307325!GO:0005788;endoplasmic reticulum lumen;0.000210787708933463!GO:0016126;sterol biosynthetic process;0.000217922061392082!GO:0045893;positive regulation of transcription, DNA-dependent;0.00024454934703015!GO:0043292;contractile fiber;0.000260999653800777!GO:0009966;regulation of signal transduction;0.000269927313586803!GO:0003697;single-stranded DNA binding;0.000288131216488365!GO:0000785;chromatin;0.000302449984347917!GO:0035257;nuclear hormone receptor binding;0.00032380130420419!GO:0045941;positive regulation of transcription;0.000329288209966617!GO:0046983;protein dimerization activity;0.000346167284646354!GO:0030016;myofibril;0.000347577815524604!GO:0048468;cell development;0.000349582539338077!GO:0019843;rRNA binding;0.000405864125521847!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000451230641851696!GO:0005769;early endosome;0.0004643456484291!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000466768252963516!GO:0004812;aminoacyl-tRNA ligase activity;0.000466768252963516!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000466768252963516!GO:0005667;transcription factor complex;0.000485317059460957!GO:0043021;ribonucleoprotein binding;0.000491518694321559!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00050126163516132!GO:0000151;ubiquitin ligase complex;0.00050596619424625!GO:0004386;helicase activity;0.000526133893973179!GO:0043623;cellular protein complex assembly;0.000526837106276303!GO:0007005;mitochondrion organization and biogenesis;0.000543518949428361!GO:0050657;nucleic acid transport;0.000554022849116889!GO:0051236;establishment of RNA localization;0.000554022849116889!GO:0050658;RNA transport;0.000554022849116889!GO:0005741;mitochondrial outer membrane;0.000585181466922736!GO:0031968;organelle outer membrane;0.000655196240097225!GO:0065002;intracellular protein transport across a membrane;0.000688789927571724!GO:0043038;amino acid activation;0.000688789927571724!GO:0006418;tRNA aminoacylation for protein translation;0.000688789927571724!GO:0043039;tRNA aminoacylation;0.000688789927571724!GO:0051188;cofactor biosynthetic process;0.000717080161665678!GO:0006403;RNA localization;0.00072488304000774!GO:0008026;ATP-dependent helicase activity;0.000784336531417992!GO:0006974;response to DNA damage stimulus;0.000846797807704806!GO:0005762;mitochondrial large ribosomal subunit;0.000866242492320862!GO:0000315;organellar large ribosomal subunit;0.000866242492320862!GO:0009967;positive regulation of signal transduction;0.00089015917086817!GO:0001726;ruffle;0.000891835610200967!GO:0003724;RNA helicase activity;0.000916701292744787!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000938483899865299!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000941279979105719!GO:0019867;outer membrane;0.000972087131182457!GO:0030027;lamellipodium;0.000997843489819693!GO:0003702;RNA polymerase II transcription factor activity;0.00102683635790687!GO:0033673;negative regulation of kinase activity;0.00103151047022915!GO:0006469;negative regulation of protein kinase activity;0.00103151047022915!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00104046085866356!GO:0001666;response to hypoxia;0.0010413392637827!GO:0007517;muscle development;0.00108232694191664!GO:0031032;actomyosin structure organization and biogenesis;0.00112104336166406!GO:0046930;pore complex;0.00113379280538518!GO:0006334;nucleosome assembly;0.00114524157657589!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00115825650573578!GO:0022890;inorganic cation transmembrane transporter activity;0.00125987919267771!GO:0033116;ER-Golgi intermediate compartment membrane;0.00129732401870628!GO:0030118;clathrin coat;0.00133259050821761!GO:0005885;Arp2/3 protein complex;0.00133259050821761!GO:0016568;chromatin modification;0.00136710233334034!GO:0005083;small GTPase regulator activity;0.00159005917235176!GO:0065009;regulation of a molecular function;0.00159728332538283!GO:0006897;endocytosis;0.00161508441986305!GO:0010324;membrane invagination;0.00161508441986305!GO:0006695;cholesterol biosynthetic process;0.00164650026376279!GO:0030867;rough endoplasmic reticulum membrane;0.00171374019380841!GO:0008154;actin polymerization and/or depolymerization;0.00180003342501438!GO:0005905;coated pit;0.00189753524584338!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00191613240618239!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.00191613240618239!GO:0051920;peroxiredoxin activity;0.00191613240618239!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00194260972961516!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00194260972961516!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00194260972961516!GO:0031497;chromatin assembly;0.002065343788472!GO:0000139;Golgi membrane;0.00225767899642573!GO:0007266;Rho protein signal transduction;0.00226950677174167!GO:0051087;chaperone binding;0.00230936770014981!GO:0006693;prostaglandin metabolic process;0.00233281200680801!GO:0006692;prostanoid metabolic process;0.00233281200680801!GO:0030017;sarcomere;0.0024088270638648!GO:0006612;protein targeting to membrane;0.00253601200091031!GO:0051348;negative regulation of transferase activity;0.0025548424722355!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00258567698488489!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00288794753061294!GO:0045792;negative regulation of cell size;0.00290766258281393!GO:0009117;nucleotide metabolic process;0.00290766258281393!GO:0030308;negative regulation of cell growth;0.00322924980845732!GO:0050662;coenzyme binding;0.00332750280757786!GO:0008283;cell proliferation;0.00339784437679207!GO:0003690;double-stranded DNA binding;0.00361038301248357!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00361882054815656!GO:0033043;regulation of organelle organization and biogenesis;0.00361882054815656!GO:0008286;insulin receptor signaling pathway;0.00371603522006161!GO:0035258;steroid hormone receptor binding;0.00371603522006161!GO:0009108;coenzyme biosynthetic process;0.00373673232396109!GO:0005865;striated muscle thin filament;0.00417235201788567!GO:0051287;NAD binding;0.00417235201788567!GO:0040008;regulation of growth;0.00422997787510799!GO:0006892;post-Golgi vesicle-mediated transport;0.004238927888262!GO:0014706;striated muscle development;0.00439405113160227!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00460920050207483!GO:0031589;cell-substrate adhesion;0.00468911124537535!GO:0006752;group transfer coenzyme metabolic process;0.00471877856213033!GO:0008250;oligosaccharyl transferase complex;0.0047644912083806!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00493537701250357!GO:0000314;organellar small ribosomal subunit;0.00497068324909069!GO:0005763;mitochondrial small ribosomal subunit;0.00497068324909069!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00509619728894572!GO:0015002;heme-copper terminal oxidase activity;0.00509619728894572!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00509619728894572!GO:0004129;cytochrome-c oxidase activity;0.00509619728894572!GO:0030055;cell-matrix junction;0.00541056747080241!GO:0051028;mRNA transport;0.00557344710499527!GO:0043488;regulation of mRNA stability;0.00563288440024633!GO:0043487;regulation of RNA stability;0.00563288440024633!GO:0006364;rRNA processing;0.00567305126126901!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00569183022209833!GO:0005924;cell-substrate adherens junction;0.0057037986186629!GO:0016853;isomerase activity;0.0057037986186629!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00587970441200602!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00589652547326473!GO:0030041;actin filament polymerization;0.00607336850249279!GO:0009719;response to endogenous stimulus;0.00607338440557703!GO:0016072;rRNA metabolic process;0.00636886082299833!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00643486358374574!GO:0008610;lipid biosynthetic process;0.00643550316611087!GO:0030119;AP-type membrane coat adaptor complex;0.00647674647201829!GO:0030658;transport vesicle membrane;0.00652056443412538!GO:0006414;translational elongation;0.00654981492335296!GO:0017022;myosin binding;0.0065591413484141!GO:0001725;stress fiber;0.00662042376077088!GO:0032432;actin filament bundle;0.00662042376077088!GO:0008654;phospholipid biosynthetic process;0.0066281970754725!GO:0008186;RNA-dependent ATPase activity;0.00664087903072494!GO:0007160;cell-matrix adhesion;0.00664087903072494!GO:0016859;cis-trans isomerase activity;0.00664390503008864!GO:0005694;chromosome;0.00703538766943997!GO:0030031;cell projection biogenesis;0.00712163920251493!GO:0043065;positive regulation of apoptosis;0.00713158703766797!GO:0005048;signal sequence binding;0.00718551138145375!GO:0051252;regulation of RNA metabolic process;0.00735677071713878!GO:0005938;cell cortex;0.00805210534685508!GO:0030695;GTPase regulator activity;0.00805883646329125!GO:0008287;protein serine/threonine phosphatase complex;0.00805883646329125!GO:0051259;protein oligomerization;0.00814911012794985!GO:0051270;regulation of cell motility;0.00821384262378235!GO:0030674;protein binding, bridging;0.00834278173965044!GO:0008139;nuclear localization sequence binding;0.0084433971730185!GO:0006402;mRNA catabolic process;0.00847459382062542!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.00854802468480014!GO:0030131;clathrin adaptor complex;0.00858926513273737!GO:0045926;negative regulation of growth;0.00858926513273737!GO:0005813;centrosome;0.00875928443461713!GO:0006891;intra-Golgi vesicle-mediated transport;0.00915939310493646!GO:0030832;regulation of actin filament length;0.00939812906823894!GO:0045045;secretory pathway;0.00942998049362474!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00957386398791631!GO:0051101;regulation of DNA binding;0.00965485051148281!GO:0005862;muscle thin filament tropomyosin;0.00975393425321067!GO:0045445;myoblast differentiation;0.00977952119733234!GO:0048500;signal recognition particle;0.00987507577407004!GO:0043068;positive regulation of programmed cell death;0.00994419678199458!GO:0030132;clathrin coat of coated pit;0.0099648555020059!GO:0030518;steroid hormone receptor signaling pathway;0.0100666940212577!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0103011208886031!GO:0005869;dynactin complex;0.0104148680281466!GO:0017166;vinculin binding;0.0104427763499074!GO:0007050;cell cycle arrest;0.0106310087174123!GO:0004576;oligosaccharyl transferase activity;0.0107151446466147!GO:0051262;protein tetramerization;0.0109161332061651!GO:0030663;COPI coated vesicle membrane;0.0109737955082732!GO:0030126;COPI vesicle coat;0.0109737955082732!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0114059144380702!GO:0035035;histone acetyltransferase binding;0.0115131676286663!GO:0045454;cell redox homeostasis;0.0116372787546251!GO:0000278;mitotic cell cycle;0.0116656654990638!GO:0032535;regulation of cellular component size;0.0118014831423971!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0118092082581466!GO:0030127;COPII vesicle coat;0.0119533271581468!GO:0012507;ER to Golgi transport vesicle membrane;0.0119533271581468!GO:0006607;NLS-bearing substrate import into nucleus;0.0119926538900167!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.012241472736778!GO:0044427;chromosomal part;0.0126309202379526!GO:0031674;I band;0.0128666741868721!GO:0016584;nucleosome positioning;0.0131671412740081!GO:0043681;protein import into mitochondrion;0.0132595699236267!GO:0030134;ER to Golgi transport vesicle;0.0135076003115821!GO:0051168;nuclear export;0.0135701427609186!GO:0019904;protein domain specific binding;0.0139291239389249!GO:0005523;tropomyosin binding;0.0140323298801882!GO:0008047;enzyme activator activity;0.0143930119057268!GO:0000159;protein phosphatase type 2A complex;0.0149698676245777!GO:0043022;ribosome binding;0.0152175688313029!GO:0006633;fatty acid biosynthetic process;0.015328363011938!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0156140258036119!GO:0051235;maintenance of localization;0.0160022409810779!GO:0004004;ATP-dependent RNA helicase activity;0.0161357840772243!GO:0030521;androgen receptor signaling pathway;0.0164616920671838!GO:0001516;prostaglandin biosynthetic process;0.0166648410400587!GO:0046457;prostanoid biosynthetic process;0.0166648410400587!GO:0048487;beta-tubulin binding;0.0166818237138866!GO:0015630;microtubule cytoskeleton;0.0168504768987883!GO:0016787;hydrolase activity;0.0170083083994917!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0171738249170507!GO:0043034;costamere;0.0171738249170507!GO:0003729;mRNA binding;0.0173962956122163!GO:0045098;type III intermediate filament;0.0174535473201452!GO:0030100;regulation of endocytosis;0.0176934600369369!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0177895312820889!GO:0008601;protein phosphatase type 2A regulator activity;0.0181252037959684!GO:0030660;Golgi-associated vesicle membrane;0.0181337694252573!GO:0051146;striated muscle cell differentiation;0.0181536282518786!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.018954564165277!GO:0008629;induction of apoptosis by intracellular signals;0.0191123338038768!GO:0046822;regulation of nucleocytoplasmic transport;0.0195716717425258!GO:0031072;heat shock protein binding;0.0198703620970531!GO:0005925;focal adhesion;0.0202016158136842!GO:0051540;metal cluster binding;0.0202936321722241!GO:0051536;iron-sulfur cluster binding;0.0202936321722241!GO:0030137;COPI-coated vesicle;0.020492556930534!GO:0001944;vasculature development;0.020492556930534!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0206581535371153!GO:0006260;DNA replication;0.0206844835731533!GO:0006399;tRNA metabolic process;0.0212235874124623!GO:0001568;blood vessel development;0.0212629477202585!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0212629477202585!GO:0045047;protein targeting to ER;0.0212629477202585!GO:0007167;enzyme linked receptor protein signaling pathway;0.0213660828818039!GO:0003746;translation elongation factor activity;0.0213660828818039!GO:0031901;early endosome membrane;0.021433791064144!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0216607874426999!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.021747075819117!GO:0042692;muscle cell differentiation;0.021817030390192!GO:0015631;tubulin binding;0.0219639976292906!GO:0005815;microtubule organizing center;0.0225181368902926!GO:0031902;late endosome membrane;0.0225181368902926!GO:0048660;regulation of smooth muscle cell proliferation;0.0225181368902926!GO:0055001;muscle cell development;0.0225225630096201!GO:0030239;myofibril assembly;0.0225225630096201!GO:0055002;striated muscle cell development;0.0225225630096201!GO:0006118;electron transport;0.0230427713485272!GO:0040011;locomotion;0.0234483087345679!GO:0006281;DNA repair;0.0239665607495903!GO:0006650;glycerophospholipid metabolic process;0.0246818366587403!GO:0004860;protein kinase inhibitor activity;0.0248789350526323!GO:0045113;regulation of integrin biosynthetic process;0.0248789350526323!GO:0045112;integrin biosynthetic process;0.0248789350526323!GO:0040012;regulation of locomotion;0.0252214568710908!GO:0051098;regulation of binding;0.0252214568710908!GO:0042805;actinin binding;0.0252214568710908!GO:0016740;transferase activity;0.0257026192711608!GO:0051049;regulation of transport;0.0258795628966309!GO:0016408;C-acyltransferase activity;0.0258795628966309!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0268616507477151!GO:0030241;muscle thick filament assembly;0.0272204818811154!GO:0031034;myosin filament assembly;0.0272204818811154!GO:0031033;myosin filament assembly or disassembly;0.0272204818811154!GO:0048739;cardiac muscle fiber development;0.0272204818811154!GO:0030018;Z disc;0.0272270553587684!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0273382751787611!GO:0018196;peptidyl-asparagine modification;0.0275290153004617!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0275290153004617!GO:0045947;negative regulation of translational initiation;0.0278526322085272!GO:0000059;protein import into nucleus, docking;0.0279210063538153!GO:0009893;positive regulation of metabolic process;0.0282241660282275!GO:0060090;molecular adaptor activity;0.0282464709337578!GO:0016363;nuclear matrix;0.0283396516208026!GO:0008312;7S RNA binding;0.0284776600908653!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0284776600908653!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0284776600908653!GO:0050811;GABA receptor binding;0.0286811672758045!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.0298124220135545!GO:0016301;kinase activity;0.0311875860558944!GO:0031529;ruffle organization and biogenesis;0.031265259917941!GO:0007006;mitochondrial membrane organization and biogenesis;0.0314710706291405!GO:0051289;protein homotetramerization;0.0318798437367635!GO:0000902;cell morphogenesis;0.0322507232730378!GO:0032989;cellular structure morphogenesis;0.0322507232730378!GO:0031625;ubiquitin protein ligase binding;0.0326659441973178!GO:0022415;viral reproductive process;0.0333240859366532!GO:0043086;negative regulation of catalytic activity;0.0333240859366532!GO:0006081;aldehyde metabolic process;0.0334379118937808!GO:0032940;secretion by cell;0.0339502364497123!GO:0006417;regulation of translation;0.0341660043684642!GO:0016791;phosphoric monoester hydrolase activity;0.0346434599620559!GO:0046394;carboxylic acid biosynthetic process;0.0348971164794172!GO:0016053;organic acid biosynthetic process;0.0348971164794172!GO:0005096;GTPase activator activity;0.0354366934118253!GO:0050790;regulation of catalytic activity;0.0354468304667066!GO:0032594;protein transport within lipid bilayer;0.0358004281354533!GO:0032907;transforming growth factor-beta3 production;0.0358004281354533!GO:0032596;protein transport into lipid raft;0.0358004281354533!GO:0032910;regulation of transforming growth factor-beta3 production;0.0358004281354533!GO:0032595;B cell receptor transport within lipid bilayer;0.0358004281354533!GO:0033606;chemokine receptor transport within lipid bilayer;0.0358004281354533!GO:0032600;chemokine receptor transport out of lipid raft;0.0358004281354533!GO:0032599;protein transport out of lipid raft;0.0358004281354533!GO:0032597;B cell receptor transport into lipid raft;0.0358004281354533!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.0358004281354533!GO:0043403;skeletal muscle regeneration;0.0358004281354533!GO:0048659;smooth muscle cell proliferation;0.036205548813655!GO:0006376;mRNA splice site selection;0.0364004303387593!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0364004303387593!GO:0006401;RNA catabolic process;0.0364695606852392!GO:0051338;regulation of transferase activity;0.0368180847172292!GO:0004722;protein serine/threonine phosphatase activity;0.0370527072472942!GO:0006917;induction of apoptosis;0.0373202946992567!GO:0008234;cysteine-type peptidase activity;0.0383322293953803!GO:0043284;biopolymer biosynthetic process;0.0395343667966143!GO:0005832;chaperonin-containing T-complex;0.039646988547555!GO:0030140;trans-Golgi network transport vesicle;0.0401617314803645!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0404197280746052!GO:0015399;primary active transmembrane transporter activity;0.0404197280746052!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0404325716744559!GO:0000786;nucleosome;0.0405072256587061!GO:0004177;aminopeptidase activity;0.0413484616073968!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0415754766916673!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0416367855867622!GO:0017091;AU-rich element binding;0.0420310297312107!GO:0050779;RNA destabilization;0.0420310297312107!GO:0000289;poly(A) tail shortening;0.0420310297312107!GO:0006509;membrane protein ectodomain proteolysis;0.0420310297312107!GO:0033619;membrane protein proteolysis;0.0420310297312107!GO:0019902;phosphatase binding;0.0423215131200373!GO:0050681;androgen receptor binding;0.0430478232906815!GO:0051674;localization of cell;0.0441487115136182!GO:0006928;cell motility;0.0441487115136182!GO:0018193;peptidyl-amino acid modification;0.0442680499830572!GO:0014866;skeletal myofibril assembly;0.0442680499830572!GO:0018149;peptide cross-linking;0.0444745755302884!GO:0004674;protein serine/threonine kinase activity;0.0450623116529002!GO:0008426;protein kinase C inhibitor activity;0.0451946567415848!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0458026775657447!GO:0030125;clathrin vesicle coat;0.0462751502142037!GO:0030665;clathrin coated vesicle membrane;0.0462751502142037!GO:0030522;intracellular receptor-mediated signaling pathway;0.0466258710411291!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.047477983107469!GO:0008147;structural constituent of bone;0.0480779211711955!GO:0051325;interphase;0.0481828198896057!GO:0030384;phosphoinositide metabolic process;0.0483303189838527!GO:0015992;proton transport;0.0484048687970534!GO:0015036;disulfide oxidoreductase activity;0.0486760638863103!GO:0005637;nuclear inner membrane;0.0497839320227551
|sample_id=10015
|sample_note=
|sample_sex=mixed
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=esophagus
|top_motifs=TFCP2:3.15625292998;TBP:3.11732400743;SRF:2.59651685561;TBX4,5:2.29084790886;HMX1:2.25847524919;TFAP2{A,C}:2.20667394969;TFAP4:2.08533872917;SNAI1..3:2.0296277751;MEF2{A,B,C,D}:1.92373628682;SP1:1.89358330215;ZNF423:1.8869834803;T:1.75998233179;HAND1,2:1.7535903803;MAZ:1.72431202286;ZEB1:1.68504714736;XCPE1{core}:1.62886922687;NR3C1:1.62381743898;RBPJ:1.58312877934;TLX2:1.5715071572;TLX1..3_NFIC{dimer}:1.52266702307;ZNF148:1.49951020083;GATA4:1.47711305749;NFATC1..3:1.47460073021;NR5A1,2:1.45436502661;MYFfamily:1.44823362282;MTF1:1.38920985578;NR1H4:1.38124837689;IKZF1:1.3727396171;GTF2A1,2:1.31963355237;MYOD1:1.30125374504;TP53:1.30032424604;FOXO1,3,4:1.28960680266;GCM1,2:1.26789776651;AR:1.26031100701;PAX1,9:1.25945994865;SMAD1..7,9:1.25349271669;KLF4:1.23110642377;FOXM1:1.22549346933;MYBL2:1.22137970214;PATZ1:1.16252040755;CDC5L:1.13462950734;HIC1:1.11228002807;ZNF238:1.10543572271;GTF2I:1.08423532448;LMO2:1.08237105046;POU5F1:1.08103144346;NKX2-3_NKX2-5:1.0489769719;NKX3-2:1.01419965335;IRF7:1.00733296642;PRDM1:0.957433923576;RXRA_VDR{dimer}:0.950938514823;SPZ1:0.950695306839;EBF1:0.925246749476;SOX5:0.907336677569;MED-1{core}:0.905430745619;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.901232011318;EP300:0.896764306658;FOX{D1,D2}:0.881399453265;NR6A1:0.86789612573;PAX5:0.863725636678;TEAD1:0.845930837444;TAL1_TCF{3,4,12}:0.844627324407;NANOG:0.831387216469;RREB1:0.82786857101;POU2F1..3:0.823047327256;HBP1_HMGB_SSRP1_UBTF:0.80349393122;MTE{core}:0.791425089881;HSF1,2:0.785746127024;NHLH1,2:0.773483937215;MZF1:0.770194597755;ESR1:0.755327856277;TGIF1:0.741569390033;ESRRA:0.677480855123;MAFB:0.622365255949;JUN:0.57666414011;EGR1..3:0.572354628614;STAT2,4,6:0.472253237137;PAX6:0.47022640987;GLI1..3:0.460024675147;FOXL1:0.447499409446;TFAP2B:0.441072616777;NFIX:0.433421413216;GFI1B:0.426523416217;TEF:0.405845710174;FOXN1:0.395539221458;UFEwm:0.35963887471;ALX4:0.343738992801;FOXQ1:0.332410533447;ATF2:0.31308726552;REST:0.302127393396;SOX2:0.296576002413;ETS1,2:0.280907532819;SPIB:0.264306145982;ZFP161:0.256160408442;ZIC1..3:0.241599213535;FOX{I1,J2}:0.240637463357;CDX1,2,4:0.220937359748;IRF1,2:0.199974310126;NFE2L1:0.170015953494;NKX2-2,8:0.147128307422;POU3F1..4:0.136686944479;ZBTB6:0.13637090957;STAT1,3:0.133003047934;NKX2-1,4:0.13096006176;ZNF384:0.127450369065;HOX{A4,D4}:0.116258604464;BPTF:0.11181246777;FOSL2:0.0420119883899;PAX3,7:-0.0315668319032;FOS_FOS{B,L1}_JUN{B,D}:-0.0333377803154;VSX1,2:-0.0390158281792;FOX{F1,F2,J1}:-0.0518876419684;PITX1..3:-0.0582241426359;ELF1,2,4:-0.0882682184564;SPI1:-0.0895952487828;NFIL3:-0.0963274180396;HES1:-0.116793028279;IKZF2:-0.117580291515;RXR{A,B,G}:-0.163305247669;GZF1:-0.180631277628;PBX1:-0.181369789146;HNF4A_NR2F1,2:-0.200175769852;CEBPA,B_DDIT3:-0.203736968198;ADNP_IRX_SIX_ZHX:-0.214418795183;PPARG:-0.217147989112;SREBF1,2:-0.225384702885;bHLH_family:-0.238092994383;BREu{core}:-0.242028157471;ATF6:-0.243400243049;NFE2:-0.267974448752;ATF4:-0.290805559438;GATA6:-0.299663212049;ZNF143:-0.300282224831;HNF1A:-0.307075108976;GFI1:-0.328317269113;RFX2..5_RFXANK_RFXAP:-0.341282308638;NFY{A,B,C}:-0.347788492939;SOX{8,9,10}:-0.365209010414;CUX2:-0.370647671068;POU6F1:-0.390023365806;BACH2:-0.426519735096;ARID5B:-0.42840216744;ONECUT1,2:-0.432359434877;SOX17:-0.436871275224;HLF:-0.45110731551;NFKB1_REL_RELA:-0.461805746601;E2F1..5:-0.490085319832;POU1F1:-0.491793971056;CRX:-0.495106796162;NKX6-1,2:-0.503733844159;DMAP1_NCOR{1,2}_SMARC:-0.531502301916;LHX3,4:-0.553765011358;NFE2L2:-0.579262238964;RUNX1..3:-0.581556660136;RORA:-0.582600350982;PAX2:-0.58272573496;XBP1:-0.645616605807;ALX1:-0.652884535183;LEF1_TCF7_TCF7L1,2:-0.66405779145;PDX1:-0.687735263757;TFDP1:-0.721568616266;FOXA2:-0.737868639677;DBP:-0.752840467767;ATF5_CREB3:-0.761045348301;CREB1:-0.787439409325;AHR_ARNT_ARNT2:-0.80664734157;FOXP1:-0.809110751238;EVI1:-0.826394136906;YY1:-0.845002496215;NRF1:-0.873068879405;PRRX1,2:-0.884758030531;AIRE:-0.898045139823;NANOG{mouse}:-0.921428654247;RFX1:-0.958352233217;HOX{A5,B5}:-0.971483343734;OCT4_SOX2{dimer}:-1.00600508248;HIF1A:-1.03038813818;ZBTB16:-1.10944622325;TOPORS:-1.12363484321;PAX4:-1.1275771808;FOXP3:-1.20198861841;MYB:-1.3078460454;HOX{A6,A7,B6,B7}:-1.34312736198;STAT5{A,B}:-1.36265207119;NKX3-1:-1.39234409628;ELK1,4_GABP{A,B1}:-1.44211977311;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.47086533318;HOXA9_MEIS1:-1.47111948516;FOXD3:-1.55092457469;HMGA1,2:-1.73688381651;EN1,2:-1.79216903994;PAX8:-2.25056562128
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10015-101C6;search_select_hide=table117:FF:10015-101C6
}}
}}

Latest revision as of 12:14, 3 June 2020

Name:esophagus, adult, pool1
Species:Human (Homo sapiens)
Library ID:CNhs10620
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueesophagus
dev stage68,74,75 years old adult
sexmixed
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyAmbion
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number0910061 -6
catalog numberCat:AM6000 Lot:0910061 -6
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004818
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10620 CAGE DRX008649 DRR009521
Accession ID Hg19

Library idBAMCTSS
CNhs10620 DRZ000946 DRZ002331
Accession ID Hg38

Library idBAMCTSS
CNhs10620 DRZ012296 DRZ013681
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0973
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0692
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0.0402
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.273
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.0402
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.077
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0402
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.138
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.0402
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0268
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.111
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0402
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0.142
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.142
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0.0402
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.402
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0.354
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.684
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.176
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.846
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.077
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0.0402
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.0402
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.016
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0402
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.175
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.423
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0.0402
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.172
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0402
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0.0402
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0234
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.077
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.177
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.111
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0402
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.111
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0402
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.142
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0402
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0.802
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0.077
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0.0402
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0.643
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.142
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.0402
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0.938
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.077
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0.077
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.077
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0.0402
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10620

Jaspar motifP-value
MA0002.20.134
MA0003.10.303
MA0004.10.0416
MA0006.10.118
MA0007.10.373
MA0009.10.888
MA0014.10.684
MA0017.10.829
MA0018.20.00828
MA0019.10.0133
MA0024.10.175
MA0025.10.664
MA0027.10.78
MA0028.13.76233e-6
MA0029.10.46
MA0030.10.0661
MA0031.10.254
MA0035.20.0481
MA0038.10.498
MA0039.20.0523
MA0040.10.503
MA0041.10.157
MA0042.10.5
MA0043.10.0157
MA0046.10.317
MA0047.20.373
MA0048.10.0175
MA0050.10.742
MA0051.10.484
MA0052.11.92285e-6
MA0055.16.26275e-4
MA0057.10.351
MA0058.10.00779
MA0059.10.00385
MA0060.10.0518
MA0061.10.00602
MA0062.28.82939e-9
MA0065.20.77
MA0066.10.984
MA0067.10.0401
MA0068.10.0458
MA0069.10.37
MA0070.10.561
MA0071.10.214
MA0072.10.284
MA0073.10.797
MA0074.10.966
MA0076.11.79142e-6
MA0077.10.971
MA0078.10.288
MA0079.20.0768
MA0080.20.135
MA0081.10.135
MA0083.11.51824e-6
MA0084.10.371
MA0087.10.332
MA0088.10.0178
MA0090.10.106
MA0091.10.356
MA0092.10.151
MA0093.10.0249
MA0099.21.50526e-6
MA0100.10.0461
MA0101.10.00493
MA0102.20.669
MA0103.10.0139
MA0104.27.58618e-4
MA0105.10.00154
MA0106.10.609
MA0107.10.0101
MA0108.22.2405e-22
MA0111.10.753
MA0112.20.48
MA0113.10.15
MA0114.10.307
MA0115.10.504
MA0116.10.111
MA0117.10.449
MA0119.10.621
MA0122.10.256
MA0124.10.67
MA0125.10.865
MA0131.10.0998
MA0135.10.109
MA0136.10.00413
MA0137.20.75
MA0138.20.121
MA0139.10.313
MA0140.10.0328
MA0141.10.185
MA0142.10.362
MA0143.10.384
MA0144.10.523
MA0145.10.00516
MA0146.10.84
MA0147.14.40715e-4
MA0148.10.181
MA0149.10.112
MA0150.10.00565
MA0152.10.723
MA0153.10.797
MA0154.10.979
MA0155.10.591
MA0156.17.1922e-4
MA0157.10.977
MA0159.10.809
MA0160.10.415
MA0162.10.366
MA0163.11.45493e-4
MA0164.10.173
MA0258.10.73
MA0259.10.0355



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10620

Novel motifP-value
10.29
100.0393
1000.103
1010.534
1020.912
1030.879
1040.879
1050.342
1060.22
1070.0221
1080.535
1090.554
110.503
1100.554
1110.153
1120.222
1130.757
1140.166
1150.147
1160.627
1170.0431
1180.0364
1190.853
120.505
1200.506
1210.641
1220.398
1234.00589e-4
1240.676
1250.671
1260.339
1270.825
1280.187
1290.756
130.226
1300.818
1310.329
1320.0324
1330.296
1340.00388
1350.0192
1360.931
1370.457
1380.982
1390.446
140.933
1400.202
1410.896
1420.531
1430.0177
1440.263
1450.458
1460.13
1470.294
1480.729
1490.00683
150.101
1500.89
1510.777
1520.0741
1530.461
1540.618
1550.672
1560.592
1570.896
1580.102
1590.978
160.718
1600.651
1610.588
1620.335
1630.602
1640.0308
1650.252
1660.473
1670.0354
1680.404
1690.0843
170.6
180.147
190.3
20.00513
200.0518
210.665
220.184
230.245
240.78
250.945
260.396
270.499
280.717
290.0466
30.395
300.00343
310.871
320.787
330.472
340.468
350.224
360.0197
370.696
380.895
390.173
40.156
400.255
410.216
420.402
430.726
440.362
450.0332
460.701
470.404
480.576
490.342
50.519
500.422
510.844
520.0705
530.904
540.859
550.566
560.987
570.19
580.973
590.246
60.502
600.25
610.702
620.922
630.574
640.526
650.557
660.0325
670.437
680.77
690.265
70.902
700.491
710.163
720.289
730.998
740.146
750.124
760.0093
770.0457
780.831
790.834
80.783
800.251
810.494
820.908
830.26
840.87
850.309
860.882
870.727
880.648
890.0749
90.353
900.0236
910.0337
920.555
930.0765
940.0894
950.215
960.872
970.932
980.269
990.113



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10620


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001043 (esophagus)
0002100 (trunk)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0005177 (trunk region element)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001041 (foregut)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010015 (human esophagus - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0009143 (esophageal region)
UBERON:0010316 (germ layer / neural crest)

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