FFCP PHASE1:Mm9::chr4:40650302..40650353,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:40650302..40650353,+ to FFCP PHASE1:Mm9::chr4:40650302..40650353,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:40650302..40650353,+ | |||
|description=CAGE_peak_at_chr4:40650302..40650353,+ | |||
|id=chr4:40650302..40650353,+ | |||
|ontology_enrichment_celltype=CL:0000144!5.14e-10!121;CL:0000012!5.14e-10!121;CL:0002371!2.21e-09!118;CL:0000548!4.44e-08!115;CL:0000004!4.44e-08!115;CL:0000255!4.44e-08!115;CL:0000063!2.58e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.08e-11,9;CL:0002251,2.08e-11,9;CL:0000075,6.60e-11,7;CL:0002076,2.87e-10,15;CL:0000066,4.18e-10,25;CL:0000239,2.80e-09,6;CL:0000677,2.80e-09,6;CL:0000584,2.80e-09,6;CL:0000223,3.60e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.04e-09,6;DOID:0060100,5.55e-08,3;DOID:4045,5.55e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000485!3.40e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,8.05e-15,11;UBERON:0003350,2.08e-11,9;UBERON:0004808,2.08e-11,9;UBERON:0001277,2.08e-11,9;UBERON:0001242,1.50e-07,13;UBERON:0001262,1.50e-07,13;UBERON:0004786,1.50e-07,13 | |||
|phase1_expression=2.40223270657191,2.09385244583617,2.27499619694768,6.0492842261366,7.51343594919521,2.01455126294268,0.467225281191051,3.61545305636414,0.563154888606667,0.234064526321993,0.856089841127525,0.159544317990673,3.0816131387617,2.53519167015092,0,0,0,0.315462165358238,0.411343300817216,0,3.14660173558958,0.397163804803541,0.783599367416806,0.159992422793407,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.380046838912748,0.252030129759931,0.443461021310609,1.90509202037889,1.23012957516914,0,3.75507105676657,0.831173226792462,2.04169356262369,5.02237956884289,4.6880120671428,8.89990364755457,38.8232782100469,10.2456822743767,5.82612423637384,0.503587271902309,0.405507724878058,0.550640256485045,0,0.218025156380447,0.439372365468944,0.194429899074283,0.419959264876088,1.43752564364972,1.8456086666351,2.17608642603403,3.36093799142464,0.257259436035947,0.573066879877513,0,0.809265843438391,0.528990979272033,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.599200221036809,0.768436610643109,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0,0.122490799214954,0.383381884072945,0.919218786610021,0,0.127687338085188,0.921639199537461,0.527545150920775,0.640413505216868,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,0,0.142371680799103,0.745597783301202,0,0.226714680320357,6.95674772884027,0,0,0.539703191637817,0.649776417447669,0,0.421333260395256,1.02258193546835,0.259786004602869,0.70667914902068,1.69012103732017,0,2.54805239706646,0,0.865964164044856,0.760079596425296,1.01104889002957,0.34255163915718,0,0.148442139064825,0.520455980298408,0,0.461230994512117,0.452167921657868,0.352766121407114,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.969750506270444,0,2.04946557908083,0.628340120440365,0,0.239630249011841,0.599902730993408,1.01656181658452,0.149790639404823,0.915001205637253,0.628271760564322,1.04294592115366,0.255715457330331,0.41557608911912,0.162241263067758,0.407357455401265,0.248813941220186,0,0,0.130120442962704,0.459804208866946,1.0803727788321,0.452114453507145,0.476255494059295,0.2562274405697,0.374806898238915,0.776110112217047,0.215567992932842,0,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0,0.398068533636986,0,1.28673953557358,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0.439100230582101,0.134206418760372,0.841159794256509,1.02904612379284,0.330418782983798,0,0.426576501070468,0.464473343720877,0,0,0,0,0.474529061544512,0.494096864172033,0.251335208800269,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0.370191491765402,0.592905254174298,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0,0.476087281772027,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0.321101179975584,0.820481806145422,0,0,0.315508219416257,0.780877488593277,0.646270193198397,0,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,0.790575555893047,0.963963949265421,0,0.35613120733451,0.162886959353576,0.989820737835213,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,2.7235168460303,0.18006109403131,0.388076051348264,0.643011105094777,0.532020700926821,0.356737635204141,0.987294123612726,0.608929898229199,0,0.21183207086382,0,0,0,0.301564624640779,0.238744688006273,0,0,0.370850604021019,0.170870880797853,0.619160603889667,0,0,0,0.228778173206523,0.679913719975421,0.839708713941948,0.276399947608848,0,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,0.655087691238533,0,0.0826534557253359,0,0.259229946583586,0.621339313086926,8.45539408026285,0.149516546043979,0.330916980914195,0.388902376688095,0.774958940866387,0,0.58678619322877,0.39061315453185,0.104859344425711,1.69108884578204,8.3528701814781,0.316011120628178,0.405450430580328,0.410843828659309,0,0.179026695667481,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0.179427713218951,0.671538465456314,0.19318959403219,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,1.35004500046361,2.2516060161211,0.906284817968409,0,0.62272408550506,0.399024873401031,0.682934423016537,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0,0.188218760830661,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |phase1_expression=2.40223270657191,2.09385244583617,2.27499619694768,6.0492842261366,7.51343594919521,2.01455126294268,0.467225281191051,3.61545305636414,0.563154888606667,0.234064526321993,0.856089841127525,0.159544317990673,3.0816131387617,2.53519167015092,0,0,0,0.315462165358238,0.411343300817216,0,3.14660173558958,0.397163804803541,0.783599367416806,0.159992422793407,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.380046838912748,0.252030129759931,0.443461021310609,1.90509202037889,1.23012957516914,0,3.75507105676657,0.831173226792462,2.04169356262369,5.02237956884289,4.6880120671428,8.89990364755457,38.8232782100469,10.2456822743767,5.82612423637384,0.503587271902309,0.405507724878058,0.550640256485045,0,0.218025156380447,0.439372365468944,0.194429899074283,0.419959264876088,1.43752564364972,1.8456086666351,2.17608642603403,3.36093799142464,0.257259436035947,0.573066879877513,0,0.809265843438391,0.528990979272033,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.599200221036809,0.768436610643109,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0,0.122490799214954,0.383381884072945,0.919218786610021,0,0.127687338085188,0.921639199537461,0.527545150920775,0.640413505216868,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,0,0.142371680799103,0.745597783301202,0,0.226714680320357,6.95674772884027,0,0,0.539703191637817,0.649776417447669,0,0.421333260395256,1.02258193546835,0.259786004602869,0.70667914902068,1.69012103732017,0,2.54805239706646,0,0.865964164044856,0.760079596425296,1.01104889002957,0.34255163915718,0,0.148442139064825,0.520455980298408,0,0.461230994512117,0.452167921657868,0.352766121407114,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.969750506270444,0,2.04946557908083,0.628340120440365,0,0.239630249011841,0.599902730993408,1.01656181658452,0.149790639404823,0.915001205637253,0.628271760564322,1.04294592115366,0.255715457330331,0.41557608911912,0.162241263067758,0.407357455401265,0.248813941220186,0,0,0.130120442962704,0.459804208866946,1.0803727788321,0.452114453507145,0.476255494059295,0.2562274405697,0.374806898238915,0.776110112217047,0.215567992932842,0,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0,0.398068533636986,0,1.28673953557358,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0.439100230582101,0.134206418760372,0.841159794256509,1.02904612379284,0.330418782983798,0,0.426576501070468,0.464473343720877,0,0,0,0,0.474529061544512,0.494096864172033,0.251335208800269,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0.370191491765402,0.592905254174298,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0,0.339490171550376,0,0,0.476087281772027,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0.321101179975584,0.820481806145422,0,0,0.315508219416257,0.780877488593277,0.646270193198397,0,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,0.790575555893047,0.963963949265421,0,0.35613120733451,0.162886959353576,0.989820737835213,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,2.7235168460303,0.18006109403131,0.388076051348264,0.643011105094777,0.532020700926821,0.356737635204141,0.987294123612726,0.608929898229199,0,0.21183207086382,0,0,0,0.301564624640779,0.238744688006273,0,0,0.370850604021019,0.170870880797853,0.619160603889667,0,0,0,0.228778173206523,0.679913719975421,0.839708713941948,0.276399947608848,0,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,0.655087691238533,0,0.0826534557253359,0,0.259229946583586,0.621339313086926,8.45539408026285,0.149516546043979,0.330916980914195,0.388902376688095,0.774958940866387,0,0.58678619322877,0.39061315453185,0.104859344425711,1.69108884578204,8.3528701814781,0.316011120628178,0.405450430580328,0.410843828659309,0,0.179026695667481,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0.179427713218951,0.671538465456314,0.19318959403219,0.187682475451182,0.36630324853453,0,0.501572104035363,0,0.920650473014354,0.572895513439397,0.343706364687375,0,0,1.35004500046361,2.2516060161211,0.906284817968409,0,0.62272408550506,0.399024873401031,0.682934423016537,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.114870937911227,0,0,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0,0.188218760830661,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr4:40650302..40650353,+ | |||
}} | }} |
Latest revision as of 10:26, 5 August 2015
Short description: | p@chr4:40650302..40650353, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:40650302..40650353, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.08e-11 | 9 |
epithelial cell of alimentary canal | 2.08e-11 | 9 |
columnar/cuboidal epithelial cell | 6.60e-11 | 7 |
endo-epithelial cell | 2.87e-10 | 15 |
epithelial cell | 4.18e-10 | 25 |
brush border epithelial cell | 2.80e-09 | 6 |
gut absorptive cell | 2.80e-09 | 6 |
enterocyte | 2.80e-09 | 6 |
endodermal cell | 3.60e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 8.05e-15 | 11 |
epithelium of mucosa | 2.08e-11 | 9 |
gastrointestinal system epithelium | 2.08e-11 | 9 |
intestinal epithelium | 2.08e-11 | 9 |
intestinal mucosa | 1.50e-07 | 13 |
wall of intestine | 1.50e-07 | 13 |
gastrointestinal system mucosa | 1.50e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.04e-09 | 6 |
musculoskeletal system cancer | 5.55e-08 | 3 |
muscle cancer | 5.55e-08 | 3 |