FFCP PHASE1:Mm9::chr5:107926893..107926904,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:107926893..107926904,+ to FFCP PHASE1:Mm9::chr5:107926893..107926904,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=284 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:107926893..107926904,+ | |||
|description=CAGE_peak_at_chr5:107926893..107926904,+ | |||
|id=chr5:107926893..107926904,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.34e-14!12;CL:0000542!1.91e-13!13;CL:0000051!1.91e-13!13;CL:0000084!2.23e-11!11;CL:0000827!2.23e-11!11;CL:0000738!3.50e-10!17;CL:0002087!3.50e-10!17;CL:0000791!2.77e-09!9;CL:0000789!2.77e-09!9;CL:0002420!2.77e-09!9;CL:0002419!2.77e-09!9;CL:0000790!2.77e-09!9;CL:0002031!8.92e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.29e-08,6;CL:0002489,1.29e-08,6;CL:0000898,1.29e-08,6;CL:0000809,1.29e-08,6;CL:0000810,1.29e-08,6;CL:0000895,1.29e-08,6;CL:0000808,1.29e-08,6;CL:0000894,1.29e-08,6;CL:0000806,1.29e-08,6;CL:0000807,1.29e-08,6;CL:0000805,1.29e-08,6;CL:0002425,1.29e-08,6;CL:0002436,1.29e-08,6;CL:0002427,1.29e-08,6;CL:0002428,1.29e-08,6;CL:0002429,1.29e-08,6;CL:0002433,1.29e-08,6;CL:0002431,1.29e-08,6;CL:0002432,1.29e-08,6;CL:0000624,8.61e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.40e-08!10;UBERON:0000411!1.40e-08!10;UBERON:0001950!1.40e-08!10 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,11.1280474455284,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,2.2661816921691,0.675022500231806,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,11.1280474455284,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,2.2661816921691,0.675022500231806,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:107926893..107926904,+ | |||
}} | }} |
Latest revision as of 23:33, 5 August 2015
Short description: | p@chr5:107926893..107926904, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:107926893..107926904, + |
Coexpression cluster: | MCL_coexpression_mm9:284 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 1.29e-08 | 6 |
double negative thymocyte | 1.29e-08 | 6 |
naive T cell | 1.29e-08 | 6 |
double-positive, alpha-beta thymocyte | 1.29e-08 | 6 |
CD4-positive, alpha-beta thymocyte | 1.29e-08 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.29e-08 | 6 |
DN4 thymocyte | 1.29e-08 | 6 |
DN1 thymic pro-T cell | 1.29e-08 | 6 |
DN2 thymocyte | 1.29e-08 | 6 |
DN3 thymocyte | 1.29e-08 | 6 |
immature single positive thymocyte | 1.29e-08 | 6 |
early T lineage precursor | 1.29e-08 | 6 |
mature CD4 single-positive thymocyte | 1.29e-08 | 6 |
resting double-positive thymocyte | 1.29e-08 | 6 |
double-positive blast | 1.29e-08 | 6 |
CD69-positive double-positive thymocyte | 1.29e-08 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.29e-08 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.29e-08 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.29e-08 | 6 |
CD4-positive, alpha-beta T cell | 8.61e-07 | 8 |