FFCP PHASE1:Mm9::chr5:123439095..123439120,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:123439095..123439120,- to FFCP PHASE1:Mm9::chr5:123439095..123439120,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=30841 | |EntrezGene=30841 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6P1G2,D3YUE3 | |UniProt=Q6P1G2,D3YUE3 | ||
|association_with_transcript=0bp_to_ENSMUST00000046073,ENSMUST00000123479,ENSMUST00000134501,NM_001003953,uc008zms.1,uc008zmu.1,uc008zmv.1_5end | |||
|cluster_id=chr5:123439095..123439120,- | |||
|description=CAGE_peak_2_at_Kdm2b_5end | |||
|id=chr5:123439095..123439120,- | |||
|ontology_enrichment_celltype=CL:0000988!9.84e-10!32;CL:0002032!9.84e-10!32;CL:0000037!9.84e-10!32;CL:0000566!9.84e-10!32;CL:0000837!9.84e-10!32;CL:0000542!3.32e-09!13;CL:0000051!3.32e-09!13;CL:0000838!7.08e-09!12;CL:0002031!1.82e-08!25;CL:0000084!3.16e-08!11;CL:0000827!3.16e-08!11;CL:0000738!1.53e-07!17;CL:0002087!1.53e-07!17;CL:0000791!3.87e-07!9;CL:0000789!3.87e-07!9;CL:0002420!3.87e-07!9;CL:0002419!3.87e-07!9;CL:0000790!3.87e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.88e-10,32;CL:0002032,8.88e-10,32;CL:0000037,8.88e-10,32;CL:0000837,8.88e-10,32;CL:0000542,2.75e-09,13;CL:0000051,2.75e-09,13;CL:0000838,5.93e-09,12;CL:0002031,1.70e-08,25;CL:0000084,2.68e-08,11;CL:0000827,2.68e-08,11;CL:0000738,8.91e-08,17;CL:0002087,8.91e-08,17;CL:0000791,3.37e-07,9;CL:0000789,3.37e-07,9;CL:0002420,3.37e-07,9;CL:0002419,3.37e-07,9;CL:0000790,3.37e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.94e-10!23;UBERON:0000974!2.94e-10!23;UBERON:0004807!2.94e-10!23;UBERON:0005058!2.94e-10!23;UBERON:0003351!2.94e-10!23;UBERON:0009113!2.94e-10!23;UBERON:0003295!2.94e-10!23;UBERON:0009722!2.94e-10!23;UBERON:0005562!2.94e-10!23;UBERON:0007690!2.94e-10!23;UBERON:0003408!6.63e-10!24;UBERON:0006562!7.28e-10!24;UBERON:0001557!7.28e-10!24;UBERON:0001042!7.28e-10!24;UBERON:0008814!7.28e-10!24;UBERON:0009145!7.28e-10!24;UBERON:0004177!2.67e-09!29;UBERON:0000065!2.89e-08!41;UBERON:0001004!4.10e-08!42;UBERON:0000072!9.78e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,7.03e-11,36;UBERON:0000153,7.39e-11,43;UBERON:0002370,2.37e-10,23;UBERON:0000974,2.37e-10,23;UBERON:0004807,2.37e-10,23;UBERON:0005058,2.37e-10,23;UBERON:0003351,2.37e-10,23;UBERON:0009113,2.37e-10,23;UBERON:0003295,2.37e-10,23;UBERON:0009722,2.37e-10,23;UBERON:0005562,2.37e-10,23;UBERON:0007690,2.37e-10,23;UBERON:0003408,5.41e-10,24;UBERON:0006562,5.94e-10,24;UBERON:0001557,5.94e-10,24;UBERON:0001042,5.94e-10,24;UBERON:0008814,5.94e-10,24;UBERON:0009145,5.94e-10,24;UBERON:0004177,2.21e-09,29;UBERON:0005057,2.21e-09,29;UBERON:0000077,2.52e-08,35;UBERON:0000065,2.93e-08,41;UBERON:0001004,4.16e-08,42;UBERON:0000072,1.03e-07,27 | |||
|phase1_expression=1.76163731815273,0.697950815278722,0,0.30246421130683,1.00179145989269,2.51818907867835,1.16806320297763,8.26389270026088,16.1907030474417,11.4691617897777,8.21846247482424,5.58405112967355,8.04643430676667,8.56719943706175,0.999329285446988,2.22722794128809,1.39912375625629,4.25873923233621,5.75880621144103,3.39511721438424,2.63634199468316,7.74469419366905,5.22399578277871,0.95995453676044,2.06468352960453,0.57423196411502,0.86152399231815,1.07735616342945,0.950117097281869,1.51218077855958,0.221730510655305,5.08024538767705,4.30545351309199,15.8481681015439,7.79899373328441,5.98444723290572,8.98345167554424,0.837063261473815,1.5626706890476,0.523523743973798,0,0.683045484958446,0.485510353031154,1.88845226963366,1.31790010585369,1.83546752161682,0.782391344348039,0.65407546914134,0.878744730937887,1.1665793944457,0.139986421625363,1.43752564364972,8.38913030288682,6.5282592781021,10.0828139742739,0,2.0057340795713,0,1.01158230429799,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0,1.79760066311043,2.30530983192933,3.83651565541367,3.64516033495565,3.36519938162211,0.285650984403804,0.883474163806454,1.5923803897944,1.43768206527355,0.919218786610021,2.20231761998777,1.65993539510744,1.84327839907492,0.659431438650969,0.640413505216868,1.04182674111352,0.837548997004143,2.8138130501584,1.83357897332172,0.883885756421003,0.569486723196412,0.372798891650601,0.530083353332288,0.453429360640713,3.18850937571846,0,0,1.07940638327563,0,0,1.68533304158102,1.70430322578058,1.55871602761721,1.06001872353102,1.54927761754349,1.28326477414318,2.54805239706646,7.11066703153331,0.865964164044856,1.52015919285059,1.01104889002957,2.05530983494308,4.14300613835475,1.1875371125186,1.90833859442749,0.913396434936424,1.61430848079241,1.80867168663147,1.52865319276416,1.50799909595611,0.247194967734374,1.59059292611903,0,0.970601099684455,1.76673214768315,0.969750506270444,1.86391761218122,7.02673912827713,11.9384622883669,1.78819938646014,6.35020159881377,2.99951365496704,7.37007317023775,1.49790639404823,0.915001205637253,0.628271760564322,1.21677024134594,2.04572365864264,0.62336413367868,0.811206315338788,2.44414473240759,3.23458123586242,1.76905930903572,2.31486041475121,4.81445638962004,4.13823787980251,1.26043490863744,3.31550599238573,4.55844544313897,4.48398020996974,5.43470002446427,2.58703370739016,3.88022387279116,1.89106080167819,2.11141348996739,2.19195732427575,1.94633074457919,2.089512999133,2.46938563689532,2.38841120182192,2.1066395619397,1.80143534980301,2.27330799516474,2.27838349789052,1.40715635988658,2.52086886045421,1.89395788468168,2.16440654922144,1.3884040159864,1.62773761325285,1.87791380979733,2.91913355917924,1.81015834904829,2.13417703302824,2.26992666728396,3.36259971078264,1.53685080703735,2.41571553768669,3.15434922846191,1.64647379806855,0.330418782983798,1.32225283331772,3.62590025909898,2.78684006232526,3.35055399437443,2.42020229548011,1.77902435075896,1.71203063501303,3.79623249235609,1.97638745668813,3.2673577144035,3.18330355265841,2.72949721966768,3.59527763461689,2.37751854862164,2.78797782556114,2.84501851429623,2.97046132785295,4.50830942692322,2.24016460629846,3.49114476901726,3.43665517462561,2.65593455921881,1.47610147979602,1.56998727841375,2.22114895059241,0.889357881261447,1.83529616287703,2.35870794135844,0,2.02860121388503,2.17059443777175,1.52775511068852,0.863088412352432,1.94562272130042,0.823684239564244,7.18841032636773,3.72140947668503,1.87222603868736,2.52578877947112,0.896987067609561,1.4473305640901,3.32555742299888,1.51593129416388,1.95557971730431,1.86719594352707,2.58159273117352,1.84256883185997,3.09456733151818,1.56106918286239,2.67979744980525,3.10050565508285,2.87018583583477,3.76885623846197,2.41758974612254,2.31438493730419,4.52373851817817,0,1.47529281905711,2.75936746304733,2.24770825982909,1.52375192569864,0.983609672260053,3.02965112645248,2.2085575359138,1.95219372148319,1.29254038639679,0.955875191810208,1.55959071857676,0.849229592366497,0.809621403349789,1.46127928955656,1.97643888973262,1.60660658210904,1.56134093729095,2.49291845134157,2.60619134965722,1.97964147567043,0,0.242780636154981,0.906970670894253,1.69744571780308,1.18120757152309,1.22974059177571,1.80899805217755,3.27180356529755,3.56497378384721,3.47640433729398,3.16255825724996,1.03135543248187,1.70219802876894,2.88097750450096,2.32845630808958,1.71469628025274,1.41872186913819,0.713475270408282,2.63278432963394,1.522324745573,0.23467170806371,0.21183207086382,2.20528398054962,3.95727007059552,3.87514624070173,1.86970067277283,2.626191568069,3.11867709515616,2.62332752966866,0.927126510052548,1.70870880797853,3.09580301944834,1.85194527369712,2.26042148405629,1.77702496037333,2.28778173206523,6.11922347977879,6.01791244991729,6.77179871641677,0,2.53068794864908,2.84647253977588,2.59212817972323,3.13632444021703,3.27543845619266,3.37160865962052,3.88471241909079,2.09404753587224,4.66613903850454,1.86401793926078,3.38215763210514,2.0932316446157,2.97825282822776,1.94451188344048,2.19571699912143,1.520605129417,2.34714477291508,1.95306577265925,2.30690557736564,0.724752362478018,2.01621004380506,3.16011120628178,2.43270258348197,3.49217254360413,3.11809975146708,2.14832034800978,3.3775830312815,6.49055427407832,5.90758108698309,6.25991989678515,6.62999217898499,6.35204966362095,5.9449307251249,7.02346443974405,10.7526750007043,1.81384306892169,0,0.538283139656854,0,4.056981474676,1.31377732815827,4.2124873581471,2.14368379079066,3.51100472824754,1.6942555278512,1.38097570952153,0.572895513439397,0.859265911718438,2.05524755931193,0,1.35004500046361,2.2516060161211,0,1.03552062350364,2.07574695168353,0.798049746802062,2.04880326904961,0.486213434136588,1.04806581313991,0.919217542250071,1.11123363900808,0.618105171716683,0.320919209591815,0.758091635291392,1.52087579934144,1.50901073108861,1.68554713445788,2.17685518176556,1.32101578597911,1.90517476513229,2.0859178670074,2.31491064556446,2.88460130562315,1.17759136107518,1.37147700954166,1.77475806159337,1.43061713968393,1.16277133305863,2.07040636913727,2.62305284464197,2.0122077016005,1.31534855718921,1.49384525230448,1.12228454331548,1.06771516311757,1.67457620038458,2.04615521584845,2.01417893541756,2.89359916471712,0.999242311751784,1.63752125911786,2.57845264857958,1.91288332068843,1.54413993383661,1.15933917810211 | |phase1_expression=1.76163731815273,0.697950815278722,0,0.30246421130683,1.00179145989269,2.51818907867835,1.16806320297763,8.26389270026088,16.1907030474417,11.4691617897777,8.21846247482424,5.58405112967355,8.04643430676667,8.56719943706175,0.999329285446988,2.22722794128809,1.39912375625629,4.25873923233621,5.75880621144103,3.39511721438424,2.63634199468316,7.74469419366905,5.22399578277871,0.95995453676044,2.06468352960453,0.57423196411502,0.86152399231815,1.07735616342945,0.950117097281869,1.51218077855958,0.221730510655305,5.08024538767705,4.30545351309199,15.8481681015439,7.79899373328441,5.98444723290572,8.98345167554424,0.837063261473815,1.5626706890476,0.523523743973798,0,0.683045484958446,0.485510353031154,1.88845226963366,1.31790010585369,1.83546752161682,0.782391344348039,0.65407546914134,0.878744730937887,1.1665793944457,0.139986421625363,1.43752564364972,8.38913030288682,6.5282592781021,10.0828139742739,0,2.0057340795713,0,1.01158230429799,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0.988866362566974,0,1.79760066311043,2.30530983192933,3.83651565541367,3.64516033495565,3.36519938162211,0.285650984403804,0.883474163806454,1.5923803897944,1.43768206527355,0.919218786610021,2.20231761998777,1.65993539510744,1.84327839907492,0.659431438650969,0.640413505216868,1.04182674111352,0.837548997004143,2.8138130501584,1.83357897332172,0.883885756421003,0.569486723196412,0.372798891650601,0.530083353332288,0.453429360640713,3.18850937571846,0,0,1.07940638327563,0,0,1.68533304158102,1.70430322578058,1.55871602761721,1.06001872353102,1.54927761754349,1.28326477414318,2.54805239706646,7.11066703153331,0.865964164044856,1.52015919285059,1.01104889002957,2.05530983494308,4.14300613835475,1.1875371125186,1.90833859442749,0.913396434936424,1.61430848079241,1.80867168663147,1.52865319276416,1.50799909595611,0.247194967734374,1.59059292611903,0,0.970601099684455,1.76673214768315,0.969750506270444,1.86391761218122,7.02673912827713,11.9384622883669,1.78819938646014,6.35020159881377,2.99951365496704,7.37007317023775,1.49790639404823,0.915001205637253,0.628271760564322,1.21677024134594,2.04572365864264,0.62336413367868,0.811206315338788,2.44414473240759,3.23458123586242,1.76905930903572,2.31486041475121,4.81445638962004,4.13823787980251,1.26043490863744,3.31550599238573,4.55844544313897,4.48398020996974,5.43470002446427,2.58703370739016,3.88022387279116,1.89106080167819,2.11141348996739,2.19195732427575,1.94633074457919,2.089512999133,2.46938563689532,2.38841120182192,2.1066395619397,1.80143534980301,2.27330799516474,2.27838349789052,1.40715635988658,2.52086886045421,1.89395788468168,2.16440654922144,1.3884040159864,1.62773761325285,1.87791380979733,2.91913355917924,1.81015834904829,2.13417703302824,2.26992666728396,3.36259971078264,1.53685080703735,2.41571553768669,3.15434922846191,1.64647379806855,0.330418782983798,1.32225283331772,3.62590025909898,2.78684006232526,3.35055399437443,2.42020229548011,1.77902435075896,1.71203063501303,3.79623249235609,1.97638745668813,3.2673577144035,3.18330355265841,2.72949721966768,3.59527763461689,2.37751854862164,2.78797782556114,2.84501851429623,2.97046132785295,4.50830942692322,2.24016460629846,3.49114476901726,3.43665517462561,2.65593455921881,1.47610147979602,1.56998727841375,2.22114895059241,0.889357881261447,1.83529616287703,2.35870794135844,0,2.02860121388503,2.17059443777175,1.52775511068852,0.863088412352432,1.94562272130042,0.823684239564244,7.18841032636773,3.72140947668503,1.87222603868736,2.52578877947112,0.896987067609561,1.4473305640901,3.32555742299888,1.51593129416388,1.95557971730431,1.86719594352707,2.58159273117352,1.84256883185997,3.09456733151818,1.56106918286239,2.67979744980525,3.10050565508285,2.87018583583477,3.76885623846197,2.41758974612254,2.31438493730419,4.52373851817817,0,1.47529281905711,2.75936746304733,2.24770825982909,1.52375192569864,0.983609672260053,3.02965112645248,2.2085575359138,1.95219372148319,1.29254038639679,0.955875191810208,1.55959071857676,0.849229592366497,0.809621403349789,1.46127928955656,1.97643888973262,1.60660658210904,1.56134093729095,2.49291845134157,2.60619134965722,1.97964147567043,0,0.242780636154981,0.906970670894253,1.69744571780308,1.18120757152309,1.22974059177571,1.80899805217755,3.27180356529755,3.56497378384721,3.47640433729398,3.16255825724996,1.03135543248187,1.70219802876894,2.88097750450096,2.32845630808958,1.71469628025274,1.41872186913819,0.713475270408282,2.63278432963394,1.522324745573,0.23467170806371,0.21183207086382,2.20528398054962,3.95727007059552,3.87514624070173,1.86970067277283,2.626191568069,3.11867709515616,2.62332752966866,0.927126510052548,1.70870880797853,3.09580301944834,1.85194527369712,2.26042148405629,1.77702496037333,2.28778173206523,6.11922347977879,6.01791244991729,6.77179871641677,0,2.53068794864908,2.84647253977588,2.59212817972323,3.13632444021703,3.27543845619266,3.37160865962052,3.88471241909079,2.09404753587224,4.66613903850454,1.86401793926078,3.38215763210514,2.0932316446157,2.97825282822776,1.94451188344048,2.19571699912143,1.520605129417,2.34714477291508,1.95306577265925,2.30690557736564,0.724752362478018,2.01621004380506,3.16011120628178,2.43270258348197,3.49217254360413,3.11809975146708,2.14832034800978,3.3775830312815,6.49055427407832,5.90758108698309,6.25991989678515,6.62999217898499,6.35204966362095,5.9449307251249,7.02346443974405,10.7526750007043,1.81384306892169,0,0.538283139656854,0,4.056981474676,1.31377732815827,4.2124873581471,2.14368379079066,3.51100472824754,1.6942555278512,1.38097570952153,0.572895513439397,0.859265911718438,2.05524755931193,0,1.35004500046361,2.2516060161211,0,1.03552062350364,2.07574695168353,0.798049746802062,2.04880326904961,0.486213434136588,1.04806581313991,0.919217542250071,1.11123363900808,0.618105171716683,0.320919209591815,0.758091635291392,1.52087579934144,1.50901073108861,1.68554713445788,2.17685518176556,1.32101578597911,1.90517476513229,2.0859178670074,2.31491064556446,2.88460130562315,1.17759136107518,1.37147700954166,1.77475806159337,1.43061713968393,1.16277133305863,2.07040636913727,2.62305284464197,2.0122077016005,1.31534855718921,1.49384525230448,1.12228454331548,1.06771516311757,1.67457620038458,2.04615521584845,2.01417893541756,2.89359916471712,0.999242311751784,1.63752125911786,2.57845264857958,1.91288332068843,1.54413993383661,1.15933917810211 | ||
|short_description=p2@Kdm2b | |||
}} | }} |
Latest revision as of 20:33, 1 October 2015
Short description: | p2@Kdm2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kdm2b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000046073, ENSMUST00000123479, ENSMUST00000134501, NM_001003953, uc008zms.1, uc008zmu.1, uc008zmv.1_5end |
EntrezGene: | Kdm2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.88e-10 | 32 |
hematopoietic oligopotent progenitor cell | 8.88e-10 | 32 |
hematopoietic stem cell | 8.88e-10 | 32 |
hematopoietic multipotent progenitor cell | 8.88e-10 | 32 |
lymphocyte | 2.75e-09 | 13 |
common lymphoid progenitor | 2.75e-09 | 13 |
lymphoid lineage restricted progenitor cell | 5.93e-09 | 12 |
hematopoietic lineage restricted progenitor cell | 1.70e-08 | 25 |
T cell | 2.68e-08 | 11 |
pro-T cell | 2.68e-08 | 11 |
leukocyte | 8.91e-08 | 17 |
nongranular leukocyte | 8.91e-08 | 17 |
mature alpha-beta T cell | 3.37e-07 | 9 |
alpha-beta T cell | 3.37e-07 | 9 |
immature T cell | 3.37e-07 | 9 |
mature T cell | 3.37e-07 | 9 |
immature alpha-beta T cell | 3.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
craniocervical region | 7.03e-11 | 36 |
anterior region of body | 7.39e-11 | 43 |
thymus | 2.37e-10 | 23 |
neck | 2.37e-10 | 23 |
respiratory system epithelium | 2.37e-10 | 23 |
hemolymphoid system gland | 2.37e-10 | 23 |
pharyngeal epithelium | 2.37e-10 | 23 |
thymic region | 2.37e-10 | 23 |
pharyngeal gland | 2.37e-10 | 23 |
entire pharyngeal arch endoderm | 2.37e-10 | 23 |
thymus primordium | 2.37e-10 | 23 |
early pharyngeal endoderm | 2.37e-10 | 23 |
gland of gut | 5.41e-10 | 24 |
pharynx | 5.94e-10 | 24 |
upper respiratory tract | 5.94e-10 | 24 |
chordate pharynx | 5.94e-10 | 24 |
pharyngeal arch system | 5.94e-10 | 24 |
pharyngeal region of foregut | 5.94e-10 | 24 |
hemopoietic organ | 2.21e-09 | 29 |
immune organ | 2.21e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 2.52e-08 | 35 |
respiratory tract | 2.93e-08 | 41 |
respiratory system | 4.16e-08 | 42 |
segment of respiratory tract | 1.03e-07 | 27 |