FFCP PHASE1:Mm9::chr5:124928310..124928337,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:124928310..124928337,- to FFCP PHASE1:Mm9::chr5:124928310..124928337,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=80291 | |EntrezGene=80291 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1588 | |||
|TSSclassifier=NA | |||
|UniProt=Q99LE1 | |UniProt=Q99LE1 | ||
|association_with_transcript=37bp_to_ENSMUST00000031347_5end | |||
|cluster_id=chr5:124928310..124928337,- | |||
|description=CAGE_peak_2_at_Rilpl2_5end | |||
|id=chr5:124928310..124928337,- | |||
|ontology_enrichment_celltype=CL:0000063!8.17e-18!66;CL:0000988!2.47e-16!32;CL:0002032!2.47e-16!32;CL:0000037!2.47e-16!32;CL:0000566!2.47e-16!32;CL:0000837!2.47e-16!32;CL:0000219!3.81e-15!54;CL:0002320!2.39e-13!46;CL:0000134!2.39e-13!46;CL:0002031!3.79e-13!25;CL:0000049!1.30e-10!19;CL:0000738!4.78e-09!17;CL:0002087!4.78e-09!17;CL:0000763!1.27e-08!16;CL:0000838!8.96e-08!12;CL:0000084!4.28e-07!11;CL:0000827!4.28e-07!11;CL:0000542!7.14e-07!13;CL:0000051!7.14e-07!13;CL:0000839!9.76e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.46e-16,32;CL:0002032,2.46e-16,32;CL:0000037,2.46e-16,32;CL:0000837,2.46e-16,32;CL:0000219,3.81e-15,54;CL:0002320,2.38e-13,46;CL:0000134,2.38e-13,46;CL:0002031,3.78e-13,25;CL:0000049,1.30e-10,19;CL:0000738,4.78e-09,17;CL:0002087,4.78e-09,17;CL:0000763,1.27e-08,16;CL:0000838,8.95e-08,12;CL:0000084,4.27e-07,11;CL:0000827,4.27e-07,11;CL:0000542,7.14e-07,13;CL:0000051,7.14e-07,13;CL:0000839,9.76e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.41e-19!48;UBERON:0002390!3.21e-18!45;UBERON:0003061!3.21e-18!45;UBERON:0002384!2.39e-13!46;UBERON:0002405!7.32e-12!70;UBERON:0004177!6.98e-10!29;UBERON:0002371!2.05e-09!16;UBERON:0002370!1.58e-08!23;UBERON:0000974!1.58e-08!23;UBERON:0004807!1.58e-08!23;UBERON:0005058!1.58e-08!23;UBERON:0003351!1.58e-08!23;UBERON:0009113!1.58e-08!23;UBERON:0003295!1.58e-08!23;UBERON:0009722!1.58e-08!23;UBERON:0005562!1.58e-08!23;UBERON:0007690!1.58e-08!23;UBERON:0001474!1.98e-08!22;UBERON:0004765!1.98e-08!22;UBERON:0001434!1.98e-08!22;UBERON:0003408!2.67e-08!24;UBERON:0006562!2.10e-07!24;UBERON:0001557!2.10e-07!24;UBERON:0001042!2.10e-07!24;UBERON:0008814!2.10e-07!24;UBERON:0009145!2.10e-07!24;UBERON:0000072!3.46e-07!27;UBERON:0004923!8.60e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.40e-19,48;UBERON:0002405,1.40e-19,48;UBERON:0002390,3.20e-18,45;UBERON:0003061,3.20e-18,45;UBERON:0002384,2.38e-13,46;UBERON:0004177,6.98e-10,29;UBERON:0005057,6.98e-10,29;UBERON:0002371,2.05e-09,16;UBERON:0002370,1.58e-08,23;UBERON:0000974,1.58e-08,23;UBERON:0004807,1.58e-08,23;UBERON:0005058,1.58e-08,23;UBERON:0003351,1.58e-08,23;UBERON:0009113,1.58e-08,23;UBERON:0003295,1.58e-08,23;UBERON:0009722,1.58e-08,23;UBERON:0005562,1.58e-08,23;UBERON:0007690,1.58e-08,23;UBERON:0001474,1.98e-08,22;UBERON:0004765,1.98e-08,22;UBERON:0001434,1.98e-08,22;UBERON:0003408,2.67e-08,24;UBERON:0000077,4.90e-08,35;UBERON:0006562,1.96e-07,24;UBERON:0001557,1.96e-07,24;UBERON:0001042,1.96e-07,24;UBERON:0008814,1.96e-07,24;UBERON:0009145,1.96e-07,24;UBERON:0000072,3.24e-07,27;UBERON:0004923,8.60e-07,24 | |||
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| ||
|short_description=p2@Rilpl2 | |||
}} | }} |
Latest revision as of 21:48, 1 October 2015
Short description: | p2@Rilpl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rilpl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1588 |
Association with transcript: | 37bp_to_ENSMUST00000031347_5end |
EntrezGene: | Rilpl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.46e-16 | 32 |
hematopoietic oligopotent progenitor cell | 2.46e-16 | 32 |
hematopoietic stem cell | 2.46e-16 | 32 |
hematopoietic multipotent progenitor cell | 2.46e-16 | 32 |
motile cell | 3.81e-15 | 54 |
connective tissue cell | 2.38e-13 | 46 |
mesenchymal cell | 2.38e-13 | 46 |
hematopoietic lineage restricted progenitor cell | 3.78e-13 | 25 |
common myeloid progenitor | 1.30e-10 | 19 |
leukocyte | 4.78e-09 | 17 |
nongranular leukocyte | 4.78e-09 | 17 |
myeloid cell | 1.27e-08 | 16 |
lymphoid lineage restricted progenitor cell | 8.95e-08 | 12 |
T cell | 4.27e-07 | 11 |
pro-T cell | 4.27e-07 | 11 |
lymphocyte | 7.14e-07 | 13 |
common lymphoid progenitor | 7.14e-07 | 13 |
myeloid lineage restricted progenitor cell | 9.76e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.40e-19 | 48 |
immune system | 1.40e-19 | 48 |
hematopoietic system | 3.20e-18 | 45 |
blood island | 3.20e-18 | 45 |
connective tissue | 2.38e-13 | 46 |
hemopoietic organ | 6.98e-10 | 29 |
immune organ | 6.98e-10 | 29 |
bone marrow | 2.05e-09 | 16 |
thymus | 1.58e-08 | 23 |
neck | 1.58e-08 | 23 |
respiratory system epithelium | 1.58e-08 | 23 |
hemolymphoid system gland | 1.58e-08 | 23 |
pharyngeal epithelium | 1.58e-08 | 23 |
thymic region | 1.58e-08 | 23 |
pharyngeal gland | 1.58e-08 | 23 |
entire pharyngeal arch endoderm | 1.58e-08 | 23 |
thymus primordium | 1.58e-08 | 23 |
early pharyngeal endoderm | 1.58e-08 | 23 |
bone element | 1.98e-08 | 22 |
skeletal element | 1.98e-08 | 22 |
skeletal system | 1.98e-08 | 22 |
gland of gut | 2.67e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 4.90e-08 | 35 |
pharynx | 1.96e-07 | 24 |
upper respiratory tract | 1.96e-07 | 24 |
chordate pharynx | 1.96e-07 | 24 |
pharyngeal arch system | 1.96e-07 | 24 |
pharyngeal region of foregut | 1.96e-07 | 24 |
segment of respiratory tract | 3.24e-07 | 27 |
organ component layer | 8.60e-07 | 24 |