Personal tools

FFCP PHASE1:Mm9::chr6:103460829..103460861,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:103460829..103460861,+
|DHSsupport=NA
|short_description=p7@Chl1
|DPIdataset=NA
|description=CAGE_peak_7_at_Chl1_5end
|association_with_transcript=-8bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end
|EntrezGene=12661
|EntrezGene=12661
|HGNC=
|HGNC=
|MCL_coexpression_id=1203
|TSSclassifier=NA
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232
|association_with_transcript=-8bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end
|cluster_id=chr6:103460829..103460861,+
|description=CAGE_peak_7_at_Chl1_5end
|id=chr6:103460829..103460861,+
|ontology_enrichment_celltype=CL:0000540!1.62e-22!33;CL:0000047!1.62e-22!33;CL:0000031!1.62e-22!33;CL:0000404!1.62e-22!33;CL:0000221!1.84e-21!44;CL:0000133!1.84e-21!44;CL:0002319!3.40e-21!43;CL:0000117!1.71e-16!23;CL:0000337!1.71e-16!23;CL:0000393!2.38e-16!39;CL:0000211!2.38e-16!39;CL:0000055!1.78e-15!50;CL:0000107!6.26e-07!9;CL:0002321!7.12e-07!70;CL:0000220!7.12e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000540,1.22e-30,33;CL:0000047,1.22e-30,33;CL:0000031,1.22e-30,33;CL:0000404,1.22e-30,33;CL:0000221,2.20e-26,44;CL:0000133,2.20e-26,44;CL:0002319,5.28e-26,43;CL:0000393,6.12e-24,39;CL:0000211,6.12e-24,39;CL:0000117,2.88e-22,23;CL:0000337,2.88e-22,23;CL:0002321,1.16e-11,70;CL:0000107,5.19e-09,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.05e-35!75;UBERON:0001016!8.05e-35!75;UBERON:0001017!1.30e-33!73;UBERON:0005743!1.30e-33!73;UBERON:0004121!5.34e-30!102;UBERON:0000924!5.34e-30!102;UBERON:0006601!5.34e-30!102;UBERON:0001049!1.93e-22!52;UBERON:0005068!1.93e-22!52;UBERON:0006241!1.93e-22!52;UBERON:0007135!1.93e-22!52;UBERON:0002346!5.39e-22!71;UBERON:0003075!5.39e-22!71;UBERON:0007284!5.39e-22!71;UBERON:0002020!1.85e-21!34;UBERON:0000955!2.90e-20!50;UBERON:0006238!2.90e-20!50;UBERON:0002616!5.55e-20!49;UBERON:0000033!8.62e-19!63;UBERON:0002791!1.26e-17!29;UBERON:0003528!1.26e-17!29;UBERON:0001893!1.26e-17!29;UBERON:0003080!3.84e-17!40;UBERON:0002780!1.61e-16!39;UBERON:0001890!1.61e-16!39;UBERON:0006240!1.61e-16!39;UBERON:0003056!1.62e-15!49;UBERON:0000956!1.18e-12!21;UBERON:0001869!1.18e-12!21;UBERON:0000203!1.18e-12!21;UBERON:0002619!4.08e-10!17;UBERON:0007811!5.29e-10!86;UBERON:0000153!5.90e-08!94;UBERON:0000010!8.34e-08!11;UBERON:0002021!5.19e-07!10;UBERON:0000411!5.19e-07!10;UBERON:0001950!5.19e-07!10;UBERON:0002410!6.26e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.70e-40,75;UBERON:0001017,3.12e-38,73;UBERON:0004121,6.65e-29,95;UBERON:0000924,6.65e-29,95;UBERON:0006601,6.65e-29,95;UBERON:0002020,6.17e-27,34;UBERON:0000073,1.85e-25,54;UBERON:0001049,1.07e-23,52;UBERON:0005068,1.07e-23,52;UBERON:0006241,1.07e-23,52;UBERON:0007135,1.07e-23,52;UBERON:0003528,1.07e-21,29;UBERON:0002791,1.07e-21,29;UBERON:0001893,1.07e-21,29;UBERON:0002346,3.21e-21,64;UBERON:0003075,3.21e-21,64;UBERON:0007284,3.21e-21,64;UBERON:0000955,1.60e-18,47;UBERON:0006238,1.60e-18,47;UBERON:0010371,2.17e-18,73;UBERON:0002616,3.86e-18,46;UBERON:0003080,4.53e-17,40;UBERON:0002780,2.81e-16,39;UBERON:0001890,2.81e-16,39;UBERON:0006240,2.81e-16,39;UBERON:0000956,6.95e-15,21;UBERON:0001869,6.95e-15,21;UBERON:0000203,6.95e-15,21;UBERON:0003056,8.45e-13,49;UBERON:0010314,1.70e-11,92;UBERON:0002619,1.95e-11,17;UBERON:0000010,3.21e-10,11;UBERON:0002021,4.00e-09,10;UBERON:0000411,4.00e-09,10;UBERON:0001950,4.00e-09,10;UBERON:0002410,5.19e-09,9;UBERON:0002420,5.22e-08,8;UBERON:0007245,5.22e-08,8;UBERON:0010009,5.22e-08,8;UBERON:0010011,5.22e-08,8;UBERON:0000454,5.22e-08,8;UBERON:0003076,2.81e-07,12;UBERON:0003057,2.81e-07,12;UBERON:0002240,3.25e-07,6;UBERON:0005174,3.25e-07,6;UBERON:0001137,3.25e-07,6
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,13.5552028775931,11.6378015439847,10.775133859605,0,0,0,0,0,1.49800055259202,1.15265491596466,10.3689612308478,3.91517221161903,7.78202357000113,7.14127461009509,5.07997644188711,6.85948475603743,4.2172007248024,6.43453150627015,4.40463523997555,6.12899222808901,8.90917892886212,10.1552441552249,11.4359554503012,10.939180781692,3.35019598801657,4.50210088025344,7.63991238884051,15.3206864446307,15.8032565687004,15.2847545576746,1.06016670666458,13.9807386197553,0,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0.5709193985953,0.776813650941515,0.445326417194474,0,0.913396434936424,0.691846491768175,0,0.470354828542819,0.376999773989026,0,0,0,0,0.220841518460394,0,0,2.92780797011547,3.77004072264219,0.255457055208591,0,0,0,6.14141621559773,2.74500361691176,11.4345460422707,8.51739168942155,7.41574826257959,4.1557608911912,5.84068547043927,0,0,0,0.210441855886474,0,0,0.540186389416048,1.20563854268572,0.476255494059295,0,0.655912071918102,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,12.4071069652835,21.3012547625119,0,0.264450566663544,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,4.49541651965817,3.5163505977661,0,0.252470927204373,5.36363973007636,4.29482618726302,6.67812532971677,7.40803273652911,9.13474563737816,11.0399847007645,5.26253912177363,4.67609372658099,8.30104333687699,1.60660658210904,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.891844088010353,0.658196082408484,0.608929898229199,0,0,0.661585194164886,0.65954501176592,0.161464426695906,0.301564624640779,0.358117032009409,0,0.291480836629851,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,1.29606408986162,0.418176592028937,0.436725127492355,0.674321731924103,1.07449492442937,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0.38983152295901,0.288635524920988,0.116876902181569,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0,0.428736758158132,0,9.03602948187307,6.90487854760765,8.02053718815155,7.04598047609119,4.11049511862385,6.7985450765073,6.07520250208625,3.60256962579376,3.17199686288943,5.69536342927002,0.830298780673413,3.99024873401031,2.04880326904961,1.94485373654635,1.25767897576789,2.94149613520023,3.33370091702423,3.91466608753899,2.24643446714271,3.79045817645696,4.05566879824384,1.88626341386076,3.183811253976,3.39333307745807,2.5845961030026,2.85776214769844,3.01299247456624,4.05109362973781,3.29668720642645,4.41596760403192,1.37147700954166,2.8396128985494,3.57654284920981,3.34296758254356,2.54095327121393,2.62305284464197,2.74391959309159,3.41990624869196,3.12349461845482,5.05028044491965,3.2031454893527,2.06859412988683,4.09231043169689,2.94379998253335,2.50778594275484,3.49734809113124,2.33931608445408,2.79332370262788,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,13.5552028775931,11.6378015439847,10.775133859605,0,0,0,0,0,1.49800055259202,1.15265491596466,10.3689612308478,3.91517221161903,7.78202357000113,7.14127461009509,5.07997644188711,6.85948475603743,4.2172007248024,6.43453150627015,4.40463523997555,6.12899222808901,8.90917892886212,10.1552441552249,11.4359554503012,10.939180781692,3.35019598801657,4.50210088025344,7.63991238884051,15.3206864446307,15.8032565687004,15.2847545576746,1.06016670666458,13.9807386197553,0,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0.5709193985953,0.776813650941515,0.445326417194474,0,0.913396434936424,0.691846491768175,0,0.470354828542819,0.376999773989026,0,0,0,0,0.220841518460394,0,0,2.92780797011547,3.77004072264219,0.255457055208591,0,0,0,6.14141621559773,2.74500361691176,11.4345460422707,8.51739168942155,7.41574826257959,4.1557608911912,5.84068547043927,0,0,0,0.210441855886474,0,0,0.540186389416048,1.20563854268572,0.476255494059295,0,0.655912071918102,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,12.4071069652835,21.3012547625119,0,0.264450566663544,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,4.49541651965817,3.5163505977661,0,0.252470927204373,5.36363973007636,4.29482618726302,6.67812532971677,7.40803273652911,9.13474563737816,11.0399847007645,5.26253912177363,4.67609372658099,8.30104333687699,1.60660658210904,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.891844088010353,0.658196082408484,0.608929898229199,0,0,0.661585194164886,0.65954501176592,0.161464426695906,0.301564624640779,0.358117032009409,0,0.291480836629851,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,1.29606408986162,0.418176592028937,0.436725127492355,0.674321731924103,1.07449492442937,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0.38983152295901,0.288635524920988,0.116876902181569,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0,0.428736758158132,0,9.03602948187307,6.90487854760765,8.02053718815155,7.04598047609119,4.11049511862385,6.7985450765073,6.07520250208625,3.60256962579376,3.17199686288943,5.69536342927002,0.830298780673413,3.99024873401031,2.04880326904961,1.94485373654635,1.25767897576789,2.94149613520023,3.33370091702423,3.91466608753899,2.24643446714271,3.79045817645696,4.05566879824384,1.88626341386076,3.183811253976,3.39333307745807,2.5845961030026,2.85776214769844,3.01299247456624,4.05109362973781,3.29668720642645,4.41596760403192,1.37147700954166,2.8396128985494,3.57654284920981,3.34296758254356,2.54095327121393,2.62305284464197,2.74391959309159,3.41990624869196,3.12349461845482,5.05028044491965,3.2031454893527,2.06859412988683,4.09231043169689,2.94379998253335,2.50778594275484,3.49734809113124,2.33931608445408,2.79332370262788,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p7@Chl1
}}
}}

Latest revision as of 10:27, 26 September 2015

Short description:p7@Chl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Chl1_5end
Coexpression cluster:MCL_coexpression_mm9:1203
Association with transcript: -8bp_to_ENSMUST00000032163, ENSMUST00000066905, ENSMUST00000089225, NM_007697, uc009dcj.1, uc009dck.1_5end
EntrezGene:Chl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Chl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.37
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F913.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F111.43
cortex, adult.CNhs10473.12-14D58.52
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G121.30
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system7.70e-4075
central nervous system3.12e-3873
ectoderm-derived structure6.65e-2995
ectoderm6.65e-2995
presumptive ectoderm6.65e-2995
gray matter6.17e-2734
regional part of nervous system1.85e-2554
neural tube1.07e-2352
neural rod1.07e-2352
future spinal cord1.07e-2352
neural keel1.07e-2352
brain grey matter1.07e-2129
regional part of telencephalon1.07e-2129
telencephalon1.07e-2129
neurectoderm3.21e-2164
neural plate3.21e-2164
presumptive neural plate3.21e-2164
brain1.60e-1847
future brain1.60e-1847
ecto-epithelium2.17e-1873
regional part of brain3.86e-1846
anterior neural tube4.53e-1740
regional part of forebrain2.81e-1639
forebrain2.81e-1639
future forebrain2.81e-1639
cerebral cortex6.95e-1521
cerebral hemisphere6.95e-1521
pallium6.95e-1521
pre-chordal neural plate8.45e-1349
structure with developmental contribution from neural crest1.70e-1192
regional part of cerebral cortex1.95e-1117
peripheral nervous system3.21e-1011
occipital lobe4.00e-0910
visual cortex4.00e-0910
neocortex4.00e-0910
autonomic nervous system5.19e-099
basal ganglion5.22e-088
nuclear complex of neuraxis5.22e-088
aggregate regional part of brain5.22e-088
collection of basal ganglia5.22e-088
cerebral subcortex5.22e-088
posterior neural tube2.81e-0712
chordal neural plate2.81e-0712
spinal cord3.25e-076
dorsal region element3.25e-076
dorsum3.25e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:103460829..103460861,%2B&oldid=4248520"