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FFCP PHASE1:Mm9::chr6:72047789..72047800,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:72047789..72047800,+
|DHSsupport=NA
|short_description=p4@St3gal5
|DPIdataset=NA
|description=CAGE_peak_4_at_St3gal5_5end
|association_with_transcript=182bp_to_ENSMUST00000114112,NM_011375,uc009chz.1_5end
|EntrezGene=20454
|EntrezGene=20454
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=O88829
|UniProt=O88829
|association_with_transcript=182bp_to_ENSMUST00000114112,NM_011375,uc009chz.1_5end
|cluster_id=chr6:72047789..72047800,+
|description=CAGE_peak_4_at_St3gal5_5end
|id=chr6:72047789..72047800,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.77e-11!71;UBERON:0003075!2.77e-11!71;UBERON:0007284!2.77e-11!71;UBERON:0001017!3.97e-11!73;UBERON:0005743!3.97e-11!73;UBERON:0000025!7.54e-11!114;UBERON:0000073!2.40e-10!75;UBERON:0001016!2.40e-10!75;UBERON:0001049!5.69e-10!52;UBERON:0005068!5.69e-10!52;UBERON:0006241!5.69e-10!52;UBERON:0007135!5.69e-10!52;UBERON:0004111!7.24e-10!122;UBERON:0004121!9.94e-10!102;UBERON:0000924!9.94e-10!102;UBERON:0006601!9.94e-10!102;UBERON:0000955!1.63e-09!50;UBERON:0006238!1.63e-09!50;UBERON:0002616!3.01e-09!49;UBERON:0002021!3.17e-08!10;UBERON:0000411!3.17e-08!10;UBERON:0001950!3.17e-08!10;UBERON:0000033!3.20e-08!63;UBERON:0002780!5.83e-08!39;UBERON:0001890!5.83e-08!39;UBERON:0006240!5.83e-08!39;UBERON:0003080!8.58e-08!40;UBERON:0000956!1.52e-07!21;UBERON:0001869!1.52e-07!21;UBERON:0000203!1.52e-07!21;UBERON:0002020!3.39e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.56e-10,10;UBERON:0000411,1.56e-10,10;UBERON:0001950,1.56e-10,10;UBERON:0000073,1.82e-10,54;UBERON:0001049,6.61e-10,52;UBERON:0005068,6.61e-10,52;UBERON:0006241,6.61e-10,52;UBERON:0007135,6.61e-10,52;UBERON:0000956,7.43e-10,21;UBERON:0001869,7.43e-10,21;UBERON:0000203,7.43e-10,21;UBERON:0001017,2.17e-09,73;UBERON:0002619,2.92e-09,17;UBERON:0000955,3.44e-09,47;UBERON:0006238,3.44e-09,47;UBERON:0002780,5.87e-09,39;UBERON:0001890,5.87e-09,39;UBERON:0006240,5.87e-09,39;UBERON:0002616,7.36e-09,46;UBERON:0001016,9.18e-09,75;UBERON:0003080,1.69e-08,40;UBERON:0002020,2.17e-08,34;UBERON:0010314,3.15e-08,92;UBERON:0000025,3.08e-07,114;UBERON:0004111,3.19e-07,122;UBERON:0003528,5.94e-07,29;UBERON:0002791,5.94e-07,29;UBERON:0001893,5.94e-07,29
|phase1_expression=4.80446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33176833270964,0.809901069559304,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0.61506478758457,15.8481681015439,0,0,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0.506884656097573,0.917733760808408,0.782391344348039,2.39827672018491,2.85592037554813,1.55543919259427,0.979904951377538,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,0,1.05798195854407,1.26766280701236,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,0.768436610643109,0.933206510776299,1.35005938331691,1.89292465216244,2.57085885963423,2.20868540951614,0.244981598429908,0,0,1.10115880999389,1.78762273319263,0.921639199537461,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,1.06958773443767,2.06240009831567,1.99320353118744,0.931997229126503,0.075726193333184,0.151143120213571,5.50742528533188,0.860423876981386,2.719885334831,0.539703191637817,0.649776417447669,0.448026887097336,1.68533304158102,0.170430322578058,0,0.70667914902068,3.94361575374705,0,2.54805239706646,0,0,0,0,1.48439043634778,0,8.46120192669501,1.21439728736295,1.82679286987285,1.61430848079241,2.26083960828934,3.05730638552832,7.03732911446183,0.247194967734374,0.289198713839823,1.76922110389975,1.61766849947409,1.76673214768315,1.45462575940567,1.86391761218122,3.51336956413857,4.1889341362691,0,0,0,0,0.599162557619291,4.11750542536764,0.125654352112864,10.9509321721134,13.0414883238469,1.0389402227978,3.40706652442291,0.81471491080253,0.248813941220186,0,0.210441855886474,0.520481771850815,0.229902104433473,0.540186389416048,1.05493372485001,0.884474488967262,0.896796041993948,0.655912071918102,0.776110112217047,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0,1.39323986772945,0,0,0,2.69263504296152,0.938104239924385,0.540186184383045,1.18372367792605,0.787056926989615,1.85120535464854,1.39520366850245,0.804820204198858,0.583826711835847,0.329119699826961,0,0.405344047729279,0,0,1.74468344388483,3.36463917702604,1.9551876352064,0,0,0.853153002140936,0.928946687441754,0.257734922644187,0.605050573870028,0.667134131534611,0.570676878337677,0,1.4822905925161,3.01602250560323,2.78539060857611,3.31438948102504,0,0,0,0.758671603812327,0.456994050438915,3.38123207019241,0.814605311381257,0.387904974335251,0.280543279561274,0.316182685621286,0.147610147979602,0.156998727841375,0.246794327843601,2.66807364378434,1.16791574001266,0.786235980452812,2.24862112384854,0.811440485554012,2.41177159752417,2.03700681425136,10.3570609482292,5.5125977103512,2.47105271869273,0,1.48856379067401,3.74445207737473,0.757736633841335,1.4351793081753,0.482443521363367,0.369506380333209,0.947457058852424,0.977789858652155,1.35796068620151,1.40814148973101,1.17254380209271,0.714130922658041,1.36593553500459,0.157635144106191,0.8858587585951,0.956728611944923,0.163863314715738,0.518054945597687,0.289298117163023,0,0.54390568381871,0.491764273019036,0,0.642202359951168,0.703270119553219,0.819674726883377,3.7870639080656,0.631016438832513,0.780877488593277,0.861693590931196,1.19484398976276,1.55959071857676,1.41538265394416,0.404810701674894,0.292255857911312,1.58115111178609,1.60660658210904,6.38730383437209,1.78065603667255,1.14020871547503,1.31976098378028,0,0.485561272309963,1.209294227859,0.377210159511796,1.77181135728464,0.922305443831782,1.80899805217755,1.09060118843252,0.356497378384721,0,0,2.06271086496374,1.70219802876894,0.900305470156551,1.81102157295856,2.14337035031592,1.95074257006501,0.891844088010353,1.48094118541909,1.522324745573,0.23467170806371,0.21183207086382,0.220528398054962,0.65954501176592,0,0.120625849856312,0.119372344003136,1.80554989719567,0,0.18542530201051,0.341741761595705,1.857481811669,1.66675074632741,0.941842285023455,0.546776910884101,0.686334519619568,0.169978429993855,0.139951452323658,0,0,0.474503990371703,1.42323626988794,0.86404272657441,0.836353184057875,1.09181281873089,0.134864346384821,0.578574190077352,0.523511883968059,1.03691978633434,0,0,2.8408143748356,2.15096037594227,2.13896307178452,1.42075805825504,2.02747350588934,1.99507305697782,2.604087696879,1.04859344425711,0.241584120826006,0,0,0.608175645870493,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,1.15913756419314,0.375364950902364,0,0,0,12.4245405375755,14.7304075682297,6.87474616127276,14.6075204992134,20.5524755931193,17.3740596399631,20.925697507186,22.0657389579868,21.7508356312418,22.2636934053283,0.415149390336707,0,0.170733605754134,1.45864030240976,0.838452650511929,1.47074806760011,0.44449345560323,0.824140228955577,0.320919209591815,1.01078884705519,0.50695859978048,0.943131706930381,1.21733959710847,1.28050304809739,0.918967503289812,0.952587382566147,0.811190281613988,0.578727661391115,0.412085900803307,1.61918812147837,1.02860775715625,1.24233064311536,0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|phase1_expression=4.80446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33176833270964,0.809901069559304,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0.61506478758457,15.8481681015439,0,0,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0.506884656097573,0.917733760808408,0.782391344348039,2.39827672018491,2.85592037554813,1.55543919259427,0.979904951377538,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,0,1.05798195854407,1.26766280701236,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,0.768436610643109,0.933206510776299,1.35005938331691,1.89292465216244,2.57085885963423,2.20868540951614,0.244981598429908,0,0,1.10115880999389,1.78762273319263,0.921639199537461,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0.56276261003168,1.06958773443767,2.06240009831567,1.99320353118744,0.931997229126503,0.075726193333184,0.151143120213571,5.50742528533188,0.860423876981386,2.719885334831,0.539703191637817,0.649776417447669,0.448026887097336,1.68533304158102,0.170430322578058,0,0.70667914902068,3.94361575374705,0,2.54805239706646,0,0,0,0,1.48439043634778,0,8.46120192669501,1.21439728736295,1.82679286987285,1.61430848079241,2.26083960828934,3.05730638552832,7.03732911446183,0.247194967734374,0.289198713839823,1.76922110389975,1.61766849947409,1.76673214768315,1.45462575940567,1.86391761218122,3.51336956413857,4.1889341362691,0,0,0,0,0.599162557619291,4.11750542536764,0.125654352112864,10.9509321721134,13.0414883238469,1.0389402227978,3.40706652442291,0.81471491080253,0.248813941220186,0,0.210441855886474,0.520481771850815,0.229902104433473,0.540186389416048,1.05493372485001,0.884474488967262,0.896796041993948,0.655912071918102,0.776110112217047,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0,1.39323986772945,0,0,0,2.69263504296152,0.938104239924385,0.540186184383045,1.18372367792605,0.787056926989615,1.85120535464854,1.39520366850245,0.804820204198858,0.583826711835847,0.329119699826961,0,0.405344047729279,0,0,1.74468344388483,3.36463917702604,1.9551876352064,0,0,0.853153002140936,0.928946687441754,0.257734922644187,0.605050573870028,0.667134131534611,0.570676878337677,0,1.4822905925161,3.01602250560323,2.78539060857611,3.31438948102504,0,0,0,0.758671603812327,0.456994050438915,3.38123207019241,0.814605311381257,0.387904974335251,0.280543279561274,0.316182685621286,0.147610147979602,0.156998727841375,0.246794327843601,2.66807364378434,1.16791574001266,0.786235980452812,2.24862112384854,0.811440485554012,2.41177159752417,2.03700681425136,10.3570609482292,5.5125977103512,2.47105271869273,0,1.48856379067401,3.74445207737473,0.757736633841335,1.4351793081753,0.482443521363367,0.369506380333209,0.947457058852424,0.977789858652155,1.35796068620151,1.40814148973101,1.17254380209271,0.714130922658041,1.36593553500459,0.157635144106191,0.8858587585951,0.956728611944923,0.163863314715738,0.518054945597687,0.289298117163023,0,0.54390568381871,0.491764273019036,0,0.642202359951168,0.703270119553219,0.819674726883377,3.7870639080656,0.631016438832513,0.780877488593277,0.861693590931196,1.19484398976276,1.55959071857676,1.41538265394416,0.404810701674894,0.292255857911312,1.58115111178609,1.60660658210904,6.38730383437209,1.78065603667255,1.14020871547503,1.31976098378028,0,0.485561272309963,1.209294227859,0.377210159511796,1.77181135728464,0.922305443831782,1.80899805217755,1.09060118843252,0.356497378384721,0,0,2.06271086496374,1.70219802876894,0.900305470156551,1.81102157295856,2.14337035031592,1.95074257006501,0.891844088010353,1.48094118541909,1.522324745573,0.23467170806371,0.21183207086382,0.220528398054962,0.65954501176592,0,0.120625849856312,0.119372344003136,1.80554989719567,0,0.18542530201051,0.341741761595705,1.857481811669,1.66675074632741,0.941842285023455,0.546776910884101,0.686334519619568,0.169978429993855,0.139951452323658,0,0,0.474503990371703,1.42323626988794,0.86404272657441,0.836353184057875,1.09181281873089,0.134864346384821,0.578574190077352,0.523511883968059,1.03691978633434,0,0,2.8408143748356,2.15096037594227,2.13896307178452,1.42075805825504,2.02747350588934,1.99507305697782,2.604087696879,1.04859344425711,0.241584120826006,0,0,0.608175645870493,0.308132871494482,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,1.15913756419314,0.375364950902364,0,0,0,12.4245405375755,14.7304075682297,6.87474616127276,14.6075204992134,20.5524755931193,17.3740596399631,20.925697507186,22.0657389579868,21.7508356312418,22.2636934053283,0.415149390336707,0,0.170733605754134,1.45864030240976,0.838452650511929,1.47074806760011,0.44449345560323,0.824140228955577,0.320919209591815,1.01078884705519,0.50695859978048,0.943131706930381,1.21733959710847,1.28050304809739,0.918967503289812,0.952587382566147,0.811190281613988,0.578727661391115,0.412085900803307,1.61918812147837,1.02860775715625,1.24233064311536,0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|short_description=p4@St3gal5
}}
}}

Latest revision as of 17:04, 1 October 2015

Short description:p4@St3gal5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_St3gal5_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 182bp_to_ENSMUST00000114112, NM_011375, uc009chz.1_5end
EntrezGene:St3gal5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@St3gal5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D78.46
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C13.06
adrenal gland, neonate N25.CNhs11223.1377-27I37.04
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F213.04
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G410.36
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A420.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.26
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe1.56e-1010
visual cortex1.56e-1010
neocortex1.56e-1010
regional part of nervous system1.82e-1054
neural tube6.61e-1052
neural rod6.61e-1052
future spinal cord6.61e-1052
neural keel6.61e-1052
cerebral cortex7.43e-1021
cerebral hemisphere7.43e-1021
pallium7.43e-1021
central nervous system2.17e-0973
regional part of cerebral cortex2.92e-0917
brain3.44e-0947
future brain3.44e-0947
regional part of forebrain5.87e-0939
forebrain5.87e-0939
future forebrain5.87e-0939
regional part of brain7.36e-0946
nervous system9.18e-0975
anterior neural tube1.69e-0840
gray matter2.17e-0834
structure with developmental contribution from neural crest3.15e-0892
tube3.08e-07114
anatomical conduit3.19e-07122
brain grey matter5.94e-0729
regional part of telencephalon5.94e-0729
telencephalon5.94e-0729
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