FFCP PHASE1:Mm9::chr6:78322861..78322889,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:78322861..78322889,+ to FFCP PHASE1:Mm9::chr6:78322861..78322889,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=448 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:78322861..78322889,+ | |||
|description=CAGE_peak_at_chr6:78322861..78322889,+ | |||
|id=chr6:78322861..78322889,+ | |||
|ontology_enrichment_celltype=CL:0000239!9.47e-21!6;CL:0000677!9.47e-21!6;CL:0000212!9.47e-21!6;CL:0000584!9.47e-21!6;CL:0000075!1.03e-17!7;CL:0002563!1.18e-13!9;CL:0002251!1.18e-13!9;CL:0000473!1.15e-11!3;CL:0000627!1.15e-11!3;CL:0000682!1.15e-11!3;CL:0000066!3.61e-10!25;CL:0002076!5.83e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.91e-20,6;CL:0000677,1.91e-20,6;CL:0000584,1.91e-20,6;CL:0000075,1.61e-17,7;CL:0000682,9.20e-16,3;CL:0002563,1.30e-13,9;CL:0002251,1.30e-13,9;CL:0000066,8.40e-12,25;CL:0002076,4.10e-08,15;CL:0000473,4.86e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.35e-32!15;UBERON:0000160!1.18e-28!43;UBERON:0001242!4.95e-26!13;UBERON:0000060!4.95e-26!13;UBERON:0001262!4.95e-26!13;UBERON:0004786!4.95e-26!13;UBERON:0005409!7.15e-20!59;UBERON:0004923!3.71e-19!24;UBERON:0003350!1.18e-13!9;UBERON:0004808!1.18e-13!9;UBERON:0001277!1.18e-13!9;UBERON:0000331!3.63e-12!3;UBERON:0002116!3.63e-12!3;UBERON:0001204!3.63e-12!3;UBERON:0001168!3.63e-12!3;UBERON:0000485!4.54e-11!11;UBERON:0001007!4.03e-09!128;UBERON:0001555!4.03e-09!128;UBERON:0007026!4.03e-09!128;UBERON:0004119!6.46e-09!130;UBERON:0000925!6.46e-09!130;UBERON:0006595!6.46e-09!130;UBERON:0001962!1.12e-07!2;UBERON:0001961!1.12e-07!2;UBERON:0001744!1.12e-07!2;UBERON:0002108!1.35e-07!16;UBERON:0004921!2.89e-07!126;UBERON:0004185!2.89e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.26e-26,15;UBERON:0001242,5.88e-24,13;UBERON:0001262,5.88e-24,13;UBERON:0004786,5.88e-24,13;UBERON:0000160,2.54e-21,31;UBERON:0000331,1.82e-16,3;UBERON:0002116,1.82e-16,3;UBERON:0001204,1.82e-16,3;UBERON:0001168,1.82e-16,3;UBERON:0004923,8.78e-16,24;UBERON:0003350,1.30e-13,9;UBERON:0004808,1.30e-13,9;UBERON:0001277,1.30e-13,9;UBERON:0005409,1.81e-13,47;UBERON:0002108,1.74e-12,4;UBERON:0000485,4.07e-11,11 | |||
|phase1_expression=0,2.79180326111489,11.8299802241279,3.0246421130683,6.51164448930251,0.503637815735669,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,2.2940928106717,10.3361753540704,7.75371593086335,3.878482188346,35.3443560188855,9.07308467135751,19.2905544270115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,5.28901133327089,0,0,0,0,0,0,1.89811624617805,0,0.251335208800269,0,0,5.39291645192533,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.632073515871632,11.5960469432499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.79180326111489,11.8299802241279,3.0246421130683,6.51164448930251,0.503637815735669,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,2.2940928106717,10.3361753540704,7.75371593086335,3.878482188346,35.3443560188855,9.07308467135751,19.2905544270115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,5.28901133327089,0,0,0,0,0,0,1.89811624617805,0,0.251335208800269,0,0,5.39291645192533,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.632073515871632,11.5960469432499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78322861..78322889,+ | |||
}} | }} |
Latest revision as of 03:30, 6 August 2015
Short description: | p@chr6:78322861..78322889, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78322861..78322889, + |
Coexpression cluster: | MCL_coexpression_mm9:448 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.91e-20 | 6 |
gut absorptive cell | 1.91e-20 | 6 |
enterocyte | 1.91e-20 | 6 |
columnar/cuboidal epithelial cell | 1.61e-17 | 7 |
M cell of gut | 9.20e-16 | 3 |
intestinal epithelial cell | 1.30e-13 | 9 |
epithelial cell of alimentary canal | 1.30e-13 | 9 |
epithelial cell | 8.40e-12 | 25 |
endo-epithelial cell | 4.10e-08 | 15 |
defensive cell | 4.86e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.26e-26 | 15 |
intestinal mucosa | 5.88e-24 | 13 |
wall of intestine | 5.88e-24 | 13 |
gastrointestinal system mucosa | 5.88e-24 | 13 |
intestine | 2.54e-21 | 31 |
ileal mucosa | 1.82e-16 | 3 |
ileum | 1.82e-16 | 3 |
mucosa of small intestine | 1.82e-16 | 3 |
wall of small intestine | 1.82e-16 | 3 |
organ component layer | 8.78e-16 | 24 |
epithelium of mucosa | 1.30e-13 | 9 |
gastrointestinal system epithelium | 1.30e-13 | 9 |
intestinal epithelium | 1.30e-13 | 9 |
gastrointestinal system | 1.81e-13 | 47 |
small intestine | 1.74e-12 | 4 |
simple columnar epithelium | 4.07e-11 | 11 |