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FFCP PHASE1:Mm9::chr7:107756174..107756337,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:107756174..107756337,+
|DHSsupport=NA
|short_description=p1@Rab6a
|DPIdataset=NA
|description=CAGE_peak_1_at_Rab6a_5end
|association_with_transcript=0bp_to_ENSMUST00000098252_5end
|EntrezGene=19346
|EntrezGene=19346
|HGNC=
|HGNC=
|MCL_coexpression_id=240
|TSSclassifier=NA
|UniProt=P35279
|UniProt=P35279
|association_with_transcript=0bp_to_ENSMUST00000098252_5end
|cluster_id=chr7:107756174..107756337,+
|description=CAGE_peak_1_at_Rab6a_5end
|id=chr7:107756174..107756337,+
|ontology_enrichment_celltype=CL:0000540!3.49e-13!33;CL:0000047!3.49e-13!33;CL:0000031!3.49e-13!33;CL:0000404!3.49e-13!33;CL:0000221!3.55e-13!44;CL:0000133!3.55e-13!44;CL:0002319!5.90e-13!43;CL:0000055!1.36e-12!50;CL:0000393!1.98e-12!39;CL:0000211!1.98e-12!39;CL:0002321!1.50e-11!70;CL:0000220!1.50e-11!70;CL:0000117!1.34e-10!23;CL:0000337!1.34e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000540,3.49e-13,33;CL:0000047,3.49e-13,33;CL:0000031,3.49e-13,33;CL:0000404,3.49e-13,33;CL:0000221,3.55e-13,44;CL:0000133,3.55e-13,44;CL:0002319,5.90e-13,43;CL:0000393,1.98e-12,39;CL:0000211,1.98e-12,39;CL:0002321,1.50e-11,70;CL:0000117,1.34e-10,23;CL:0000337,1.34e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.00e-25,75;UBERON:0001017,1.62e-24,73;UBERON:0004121,6.02e-23,95;UBERON:0000924,6.02e-23,95;UBERON:0006601,6.02e-23,95;UBERON:0000073,7.07e-18,54;UBERON:0001049,1.14e-16,52;UBERON:0005068,1.14e-16,52;UBERON:0006241,1.14e-16,52;UBERON:0007135,1.14e-16,52;UBERON:0002020,7.27e-16,34;UBERON:0010371,1.54e-15,73;UBERON:0002346,1.63e-15,64;UBERON:0003075,1.63e-15,64;UBERON:0007284,1.63e-15,64;UBERON:0000955,4.98e-14,47;UBERON:0006238,4.98e-14,47;UBERON:0002616,1.28e-13,46;UBERON:0003528,2.15e-13,29;UBERON:0002791,2.15e-13,29;UBERON:0001893,2.15e-13,29;UBERON:0003080,3.14e-12,40;UBERON:0010314,8.77e-12,92;UBERON:0002780,1.19e-11,39;UBERON:0001890,1.19e-11,39;UBERON:0006240,1.19e-11,39;UBERON:0003056,2.41e-10,49;UBERON:0000956,1.36e-09,21;UBERON:0001869,1.36e-09,21;UBERON:0000203,1.36e-09,21;UBERON:0004111,1.12e-08,122;UBERON:0011216,1.32e-08,194;UBERON:0002619,2.10e-08,17;UBERON:0002021,4.41e-08,10;UBERON:0000411,4.41e-08,10;UBERON:0001950,4.41e-08,10;UBERON:0000025,5.35e-08,114
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024658914,77.4647169753294,73.8756531221121,83.426230109773,78.3921603848778,85.2342669152067,105.383156049803,107.319936213452,109.91349735144,78.2887534489526,36.0763480757882,76.5524715745171,70.9816924060949,80.1138895977476,74.912697617084,74.5096513414332,70.8837721420354,82.1589668365325,87.3478339066171,43.9683099903331,37.4439008135225,26.544934132767,54.330357697764,40.9816719087661,26.8936103564036,24.8847106977799,23.245718509408,18.0293174279953,16.3935375163781,13.3275713931555,13.336191164625,13.8131873637472,15.8856345605796,13.7582933545671,12.739582337791,119.486912165216,75.9191960539301,44.9466421613473,90.3219236038742,99.8790201146425,105.852916154467,108.975216439023,123.690554728621,86.2704018940825,502.629139929189,439.610600864354,451.441664590245,433.241872688436,517.922384946606,566.545423042275,531.917730182663,515.167456488508,575.49085940994,596.459879138097,84.8980503238565,101.352317843862,86.7326717231002,93.5960860712932,110.256523542319,127.21970784741,100.45552096633,97.2485470167581,104.940581536524,97.5411237408258,100.124323456645,99.7833345932343,85.4946963200026,95.3974770832552,92.9880242391379,97.163913021747,99.7764046385206,92.0176981611873,97.2522725895804,93.3241153652079,79.8885358058018,81.2839192209766,81.3067407720364,92.4403209781609,97.2149899690365,95.7837361333778,92.9274102193685,80.7624014114178,85.9640040644305,102.127893441708,102.975195731783,89.4420699970116,83.8923638497863,94.0466625998813,95.488772435665,120.658509144028,102.695976107534,107.865269132246,104.634717641657,102.575009890575,111.760296769043
|phase1_expression=114.826723374137,284.763932633719,345.344422696658,345.4141293124,418.2479345052,139.339795686869,144.372611888035,13.8161956082487,43.3629264227134,52.6645184224485,14.2110913627169,18.4273687279227,12.8400547448404,14.7740480088106,47.3015861778241,52.0361437191853,90.2434822785309,10.8834447048592,8.36398044995006,14.429248161133,118.975562921347,22.3404640201992,26.6423784921714,141.913279017752,142.921982104847,257.255919923529,211.504140114106,172.592457381397,176.911803513884,146.17747526076,135.477342010391,31.7515336729816,33.8285633171514,63.3926724061755,51.1267366959756,57.5171872940384,54.7173874783149,339.847684158369,203.147189576188,214.644735029257,358.821207698919,311.468741141051,273.827839109571,92.2823675760982,91.2392380975631,73.2351541125109,94.6693526661127,80.6693078607652,89.1925901901956,93.5207814547303,99.6703321972581,122.189679710226,11.0736519998106,31.9159342484992,19.8295341494054,128.629718017973,106.876973097156,127.371006792528,219.311043571804,255.502642988392,252.898729998965,90.8103345945274,85.3723004266694,72.4419272411526,79.109309005358,73.1794518394483,137.216850617429,117.955019733717,121.005777563993,121.775356375185,139.024799453264,295.648768857937,265.042249141936,129.472774770206,115.302101634938,131.448286485233,392.012536357824,362.121290809592,353.448633022616,239.637384805762,218.838443496964,192.217033735444,344.232637768703,317.960874667899,323.32109229573,274.888470246932,246.872494505644,221.815340532108,126.917100026416,152.956837656134,89.2782625201168,104.971712991729,133.954352740427,102.003903219547,85.7704871030923,103.046184032387,97.6088719915675,77.7162270955943,64.4269291415115,66.0745004334336,125.914017280352,56.4636500622998,40.7688383530633,85.3280043783997,98.2869326190912,84.6221950686829,107.676706788149,91.9180231738433,26.4116641320115,86.9870934919873,77.894911717995,70.6359909684168,71.9520351438903,64.8107354376277,74.5512403240369,57.303965646332,105.552251222578,122.041857240405,90.2302762988872,102.236649166763,80.3863127195832,66.4279096795254,126.746397628323,267.601648468554,247.35656074669,162.470687112664,23.0045039051367,20.3966928537759,29.9885735892433,413.72174603612,294.172887612377,181.570538803089,545.460716763364,553.112534205505,371.317235627934,341.031134968427,96.1363594746986,69.4190896004319,96.7928164800974,86.7020446252273,61.4168490783962,94.7196670265908,91.8316862007281,81.2298968134504,97.7004127813068,92.6262197659464,98.5742142368347,116.416516832557,78.2511814346217,75.4533259869599,77.7703968804654,94.6925564087123,86.4726945091609,101.34138045795,96.3060398389175,78.8175696601233,23.1730351813367,32.9405321106835,40.3512169141742,97.9704904092924,84.8984337131568,84.269044763755,90.6732337291355,83.821562724394,72.9683443957299,84.409821944398,90.1398628702721,88.2745988295801,94.9510334000782,93.7396219891634,105.389452409612,105.263990946239,98.5780017656817,95.9575894136658,454.857158744207,202.207563325294,290.107691459775,184.586495531154,70.3851226766272,72.9223149641777,78.6091514064769,100.236711737801,106.296704957848,131.826358896003,181.270101510003,141.970498972097,145.020415477756,138.672661012682,140.374142725766,176.168604096227,133.141038722812,131.632381621137,90.2819208536669,67.1781254145206,93.5474206086568,62.3173063206662,62.8406058423107,73.2217959654926,71.0778677276652,68.1958883665762,64.2124796871223,67.8684401569903,98.7187248200206,48.5519257633834,53.4640466707912,52.8425964104406,50.7150303471257,63.4295930148856,81.4802725700543,69.3347691256454,72.6365815952159,85.3885995014933,106.388472830242,96.3845054461424,87.0585107989624,96.4851313757967,90.9544886556095,89.7344949735863,136.717360723287,76.1755475317349,60.1340763071075,56.1856233915873,56.7950400858175,63.65237782789,86.885928923395,103.225699716776,94.108181031396,92.7937049628367,116.083071582651,98.3179888294428,83.5795312230935,99.2292541869169,57.3006878969235,62.0052479553329,96.8775617847501,99.3372286697037,376.812234701348,352.807176642532,62.7870840792667,108.814969625085,127.465320644168,122.597765709144,156.612810151745,135.495308439097,143.482346109062,143.519801109938,118.609535590744,148.465975818946,145.070614506374,182.831829044008,86.5834519770439,78.5269312172596,100.66414088051,89.5787767740868,71.6823747035799,53.1689593179409,56.2321815954437,52.9980274114074,50.2013217897314,73.4770003585987,95.1016118859054,50.1676546678958,59.5350621902485,61.3111310395483,51.6551182017494,52.5991270565753,105.19583817792,69.3235212020544,63.773831104898,91.3075769234583,91.3302203257709,98.4595873163429,106.134118288368,81.5966063627126,95.9807285980575,91.935118754898,107.617858250821,85.9057377825111,87.5137192691808,91.1328295664435,107.554481946826,126.060211004207,143.117090785257,376.042512477314,48.0147175041966,71.8226300512014,50.3729114445616,51.0478518482713,47.5695912469168,48.5009727197828,37.9051898886297,38.9065037459769,41.5981921151316,105.968438599678,75.6043024658914,77.4647169753294,73.8756531221121,83.426230109773,78.3921603848778,85.2342669152067,105.383156049803,107.319936213452,109.91349735144,78.2887534489526,36.0763480757882,76.5524715745171,70.9816924060949,80.1138895977476,74.912697617084,74.5096513414332,70.8837721420354,82.1589668365325,87.3478339066171,43.9683099903331,37.4439008135225,26.544934132767,54.330357697764,40.9816719087661,26.8936103564036,24.8847106977799,23.245718509408,18.0293174279953,16.3935375163781,13.3275713931555,13.336191164625,13.8131873637472,15.8856345605796,13.7582933545671,12.739582337791,119.486912165216,75.9191960539301,44.9466421613473,90.3219236038742,99.8790201146425,105.852916154467,108.975216439023,123.690554728621,86.2704018940825,502.629139929189,439.610600864354,451.441664590245,433.241872688436,517.922384946606,566.545423042275,531.917730182663,515.167456488508,575.49085940994,596.459879138097,84.8980503238565,101.352317843862,86.7326717231002,93.5960860712932,110.256523542319,127.21970784741,100.45552096633,97.2485470167581,104.940581536524,97.5411237408258,100.124323456645,99.7833345932343,85.4946963200026,95.3974770832552,92.9880242391379,97.163913021747,99.7764046385206,92.0176981611873,97.2522725895804,93.3241153652079,79.8885358058018,81.2839192209766,81.3067407720364,92.4403209781609,97.2149899690365,95.7837361333778,92.9274102193685,80.7624014114178,85.9640040644305,102.127893441708,102.975195731783,89.4420699970116,83.8923638497863,94.0466625998813,95.488772435665,120.658509144028,102.695976107534,107.865269132246,104.634717641657,102.575009890575,111.760296769043
|short_description=p1@Rab6a
}}
}}

Latest revision as of 14:53, 25 September 2015

Short description:p1@Rab6a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab6a_5end
Coexpression cluster:MCL_coexpression_mm9:240
Association with transcript: 0bp_to_ENSMUST00000098252_5end
EntrezGene:Rab6a
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rab6a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7114.83
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5284.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6345.34
CD326+ enterocyte, pool1.CNhs13542.11848-124I3345.41
CD326+ enterocyte, pool2.CNhs13197.11849-124I4418.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7139.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8144.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E743.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F252.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.43
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.84
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A147.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A352.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A590.24
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.36
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3118.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I926.64
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1141.91
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2142.92
GP2+ M cell, pool1.CNhs13228.11845-124H9257.26
GP2+ M cell, pool2.CNhs13231.11846-124I1211.50
GP2+ M cell, pool3.CNhs13240.11847-124I2172.59
Ileum epithelium, pool1.CNhs13199.10252-104B9176.91
Ileum epithelium, pool2.CNhs13232.10253-104C1146.18
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8135.48
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I331.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G633.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F551.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F657.52
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F754.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8339.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1203.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3214.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9358.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2311.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4273.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D892.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D991.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B373.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B794.67
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C280.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B889.19
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C393.52
Mouse Astrocytes, donor2.CNhs12078.11552-120C499.67
Mouse Astrocytes, donor3.CNhs12107.11633-122C4122.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.07
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.83
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1128.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1106.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5127.37
Mouse Granule cells, donor1.CNhs12131.11713-123C3219.31
Mouse Granule cells, donor2.CNhs12357.11731-123E3255.50
Mouse Granule cells, donor3.CNhs12108.11636-122C7252.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C690.81
Mouse Meningeal cells, donor3.CNhs12109.11639-122D185.37
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C772.44
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E779.11
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D273.18
Mouse Microglia, donor1.CNhs12629.11718-123C8137.22
Mouse Microglia, donor2.CNhs12634.11736-123E8117.96
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5121.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5121.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9139.02
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1295.65
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5265.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2129.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2115.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6131.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3392.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3362.12
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7353.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4239.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4218.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8192.22
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4344.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5317.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6323.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6274.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6246.87
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1221.82
Mouse Schwann, donor1.CNhs12507.11728-123D9126.92
Mouse Schwann, donor2.CNhs12573.11746-123F9152.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G389.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7104.97
Mouse hepatocyte, donor1.CNhs13078.11714-123C4133.95
Mouse hepatocyte, donor3.CNhs12615.11637-122C8102.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F485.77
Mouse hepatocyte, donor8.CNhs13091.11824-124F6103.05
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A797.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I777.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E364.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I866.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6125.91
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H156.46
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I840.77
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B685.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G198.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G284.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3107.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B691.92
accessory axillary lymph node, adult.CNhs10475.1063-29H926.41
adrenal gland, adult.CNhs10508.49-24D786.99
adrenal gland, embryo E14.CNhs11038.406-44C577.89
adrenal gland, embryo E16.CNhs11004.1254-43D670.64
adrenal gland, embryo E17.CNhs11043.1263-45I171.95
adrenal gland, embryo E18.CNhs11026.1262-18F564.81
adrenal gland, neonate N00.CNhs11191.1311-23C174.55
adrenal gland, neonate N25.CNhs11223.1377-27I357.30
amnion, adult pregnant day17.5.CNhs10488.583-22A8105.55
aorta, adult.CNhs10498.46-23H1122.04
bone (os femoris), adult.CNhs10483.56-12G290.23
bone (os femoris), neonate N02.CNhs11227.1985-43F5102.24
bone (os femoris), neonate N16.CNhs11225.1525-43A680.39
bone (os femoris), neonate N20.CNhs11195.1350-25C366.43
cecum, adult.CNhs10467.37-13H4126.75
cerebellum, adult.CNhs10494.15-8B2267.60
cerebellum, neonate N30.CNhs11135.1395-42I2247.36
colon, adult.CNhs10468.36-18H7162.47
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D120.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D429.99
corpora quadrigemina, adult.CNhs10501.16-22A4413.72
corpus striatum, adult.CNhs10487.19-21D8294.17
corpus striatum, neonate N00.CNhs11226.630-43F1181.57
cortex, adult.CNhs10473.12-14D5545.46
cortex, neonate N30.CNhs11107.1392-42F2553.11
diencephalon, adult.CNhs10482.20-12F2371.32
diencephalon, neonate N30.CNhs11201.1388-42B2341.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B196.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A269.42
epididymis, adult.CNhs10490.58-23B296.79
eyeball, adult.CNhs10484.31-12G486.70
eyeball, embryo E12.CNhs11016.345-16C661.42
eyeball, embryo E14.CNhs10521.399-16E294.72
eyeball, embryo E15.CNhs10593.426-16C991.83
eyeball, embryo E17.CNhs11023.1261-18D481.23
eyeball, neonate N00.CNhs11207.633-15C697.70
eyeball, neonate N01.CNhs11140.1532-43E792.63
eyeball, neonate N02.CNhs11205.1551-44G898.57
eyeball, neonate N16.CNhs11188.777-19A2116.42
forelimb, embryo E11.CNhs10596.335-25E278.25
forelimb, embryo E12.CNhs10600.359-14H275.45
forelimb, embryo E13.CNhs10589.384-1E277.77
forelimb, embryo E14.CNhs10577.413-26A894.69
forelimb, embryo E15.CNhs11007.437-20E786.47
forelimb, embryo E17.CNhs10598.1517-43C4101.34
forelimb, embryo E18.CNhs11008.1520-43B596.31
gonad, embryo E13.CNhs11044.1564-45I678.82
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C823.17
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D232.94
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D540.35
heart, embryo E11.CNhs10586.331-24E997.97
heart, embryo E12.CNhs11015.353-12F584.90
heart, embryo E13.CNhs11013.376-3I984.27
heart, embryo E14.CNhs10597.403-26D490.67
heart, embryo E15.CNhs11017.431-16C883.82
heart, embryo E16.CNhs11021.457-17C672.97
heart, embryo E17.CNhs11025.479-18E584.41
heart, embryo E18.CNhs11030.1283-20G390.14
heart, neonate N00.CNhs11213.639-21E388.27
heart, neonate N03.CNhs11221.1349-25I294.95
heart, neonate N10.CNhs11118.749-24G193.74
heart, neonate N16.CNhs11209.782-15G1105.39
heart, neonate N20.CNhs11127.821-26I6105.26
heart, neonate N25.CNhs11196.1351-25D398.58
heart, neonate N30.CNhs11202.1390-42D295.96
hippocampus, adult.CNhs10478.13-16E8454.86
hippocampus, neonate N00.CNhs11228.627-43G1202.21
intestinal mucosa, adult.CNhs10506.860-29I3290.11
intestine, adult.CNhs10496.178-9A3184.59
intestine, embryo E12.CNhs11019.1251-16I570.39
intestine, embryo E13.CNhs11010.381-16D572.92
intestine, embryo E15.CNhs10602.976-16D878.61
intestine, embryo E16.CNhs10585.463-22H4100.24
intestine, embryo E17.CNhs10582.482-18D3106.30
intestine, embryo E18.CNhs10526.1289-20F7131.83
intestine, neonate N00.CNhs11126.644-26D1181.27
intestine, neonate N01.CNhs11192.1322-23E9141.97
intestine, neonate N06.CNhs11102.688-20B8145.02
intestine, neonate N07.CNhs11095.720-20F2138.67
intestine, neonate N10.CNhs11098.755-23A5140.37
intestine, neonate N20.CNhs11187.827-18D1176.17
intestine, neonate N25.CNhs11121.1352-25E3133.14
intestine, neonate N30.CNhs11131.1384-42G1131.63
kidney, embryo E14.CNhs10606.411-4I990.28
kidney, embryo E15.CNhs10997.434-16F867.18
kidney, embryo E16.CNhs10584.464-22A593.55
kidney, embryo E17.CNhs11028.483-18I262.32
kidney, embryo E18.CNhs11001.1288-20C762.84
kidney, neonate N00.CNhs11214.646-21G773.22
kidney, neonate N10.CNhs11206.758-6D571.08
kidney, neonate N20.CNhs11113.832-19I168.20
kidney, neonate N25.CNhs11122.1353-25F364.21
kidney, neonate N30.CNhs11203.1385-42H167.87
liver, adult pregnant day01.CNhs10466.508-5B298.72
liver, embryo E12.CNhs10601.355-15F848.55
liver, embryo E13.CNhs10524.378-3H653.46
liver, embryo E14.CNhs10594.409-16E152.84
liver, embryo E15.CNhs10520.433-16D750.72
liver, embryo E16.CNhs10523.462-17F563.43
liver, embryo E17.CNhs10510.481-18A381.48
liver, embryo E18.CNhs10579.499-43G469.33
liver, neonate N00.CNhs11117.641-24F472.64
liver, neonate N03.CNhs11123.1345-25G285.39
liver, neonate N06.CNhs11101.684-20A8106.39
liver, neonate N07.CNhs11103.716-20H296.38
liver, neonate N10.CNhs11115.751-24B987.06
liver, neonate N20.CNhs11220.823-25A396.49
liver, neonate N25.CNhs11198.1368-26H190.95
liver, neonate N30.CNhs11106.1382-42D189.73
lung, adult.CNhs10474.28-22B1136.72
lung, embryo E12.CNhs10522.354-16G276.18
lung, embryo E14.CNhs10604.404-26F860.13
lung, embryo E15.CNhs11020.432-17C556.19
lung, embryo E16.CNhs10998.458-17B656.80
lung, embryo E17.CNhs10605.480-44A663.65
lung, embryo E18.CNhs10583.1287-20I686.89
lung, neonate N00.CNhs11224.640-42C6103.23
lung, neonate N06.CNhs11212.683-20E594.11
lung, neonate N07.CNhs11111.715-19A392.79
lung, neonate N10.CNhs11219.750-23E6116.08
lung, neonate N20.CNhs11109.822-18A498.32
lung, neonate N25.CNhs11119.1359-25C783.58
lung, neonate N30.CNhs11133.1394-42H299.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A157.30
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A162.01
mammary gland, adult lactating day02.CNhs10480.595-22B696.88
mammary gland, adult pregnant day19.CNhs10476.588-5H299.34
medulla oblongata, adult.CNhs10477.17-12C2376.81
medulla oblongata, neonate N30.CNhs11200.1396-42A3352.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C762.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2108.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1127.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2122.60
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3156.61
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7135.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8143.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9143.52
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4118.61
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5148.47
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6145.07
olfactory brain, adult.CNhs10489.18-22I9182.83
ovary, adult.CNhs10507.91-2I786.58
ovary, embryo E18.CNhs11040.505-44H778.53
ovary, neonate N00.CNhs11217.1299-22I4100.66
oviduct, adult pregnant day01.CNhs10500.988-6G689.58
pancreas, adult.CNhs10486.34-16E471.68
pancreas, embryo E14.CNhs11012.405-44F453.17
pancreas, embryo E15.CNhs11042.1556-45F256.23
pancreas, embryo E16.CNhs11003.460-26E553.00
pancreas, embryo E17.CNhs10599.1558-45G350.20
pancreas, embryo E18.CNhs10580.1535-43I773.48
pancreas, neonate N00.CNhs11105.645-26G995.10
pancreas, neonate N01.CNhs11138.1531-43D750.17
pancreas, neonate N02.CNhs11139.1539-43D859.54
pancreas, neonate N16.CNhs11136.787-43B661.31
pancreas, neonate N25.CNhs11094.1555-45E251.66
pancreas, neonate N30.CNhs11182.1548-44H552.60
pituitary gland, adult.CNhs10493.21-1G8105.20
pituitary gland, embryo E12.CNhs11018.346-16E669.32
pituitary gland, embryo E13.CNhs11009.370-44C763.77
pituitary gland, embryo E14.CNhs11037.398-44A591.31
pituitary gland, embryo E15.CNhs10592.427-16B991.33
pituitary gland, embryo E16.CNhs11036.449-43F698.46
pituitary gland, embryo E17.CNhs11039.1265-44F5106.13
pituitary gland, neonate N00.CNhs11190.1308-22E981.60
placenta, adult pregnant day10.CNhs10472.539-13I795.98
placenta, adult pregnant day17.CNhs10464.577-18G391.94
prostate, adult.CNhs10470.859-1F8107.62
skin, adult.CNhs10492.30-1C385.91
skin, neonate N00.CNhs11124.650-25G487.51
skin, neonate N03.CNhs11215.662-22H391.13
skin, neonate N06.CNhs11097.693-20I5107.55
skin, neonate N10.CNhs11108.762-6C4126.06
small intestine, neonate N16.CNhs11114.790-21I1143.12
spinal cord, adult.CNhs10505.24-13C9376.04
spleen, adult.CNhs10465.25-2G248.01
spleen, embryo E16.CNhs11035.461-43C171.82
spleen, embryo E18.CNhs11011.1271-21F250.37
spleen, neonate N10.CNhs11116.752-24D151.05
spleen, neonate N20.CNhs11112.824-19H147.57
spleen, neonate N25.CNhs11099.1354-25G348.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C637.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C938.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D341.60
stomach, adult.CNhs10503.33-1H6105.97
stomach, embryo E12.CNhs10588.356-43E375.60
stomach, embryo E15.CNhs10603.1252-16G877.46
stomach, embryo E16.CNhs11022.459-17D473.88
stomach, embryo E17.CNhs11006.1035-18D583.43
stomach, embryo E18.CNhs10999.1286-20C678.39
stomach, neonate N03.CNhs11193.1340-24B885.23
stomach, neonate N07.CNhs11210.718-18A9105.38
stomach, neonate N25.CNhs11104.1355-25E4107.32
stomach, neonate N30.CNhs11134.1386-42I1109.91
submandibular gland, adult.CNhs10469.59-29C178.29
testis, adult.CNhs10504.57-7G536.08
testis, embryo E13.CNhs11031.389-23F576.55
testis, embryo E15.CNhs11034.443-27C570.98
testis, embryo E16.CNhs11033.470-26G580.11
testis, embryo E17.CNhs11029.486-18I574.91
testis, embryo E18.CNhs11027.503-18G574.51
testis, neonate N00.CNhs11189.1300-22B770.88
testis, neonate N07.CNhs11222.726-26I482.16
testis, neonate N10.CNhs11204.763-44D987.35
testis, neonate N20.CNhs11110.839-18H343.97
testis, neonate N30.CNhs11130.1391-42E237.44
thymus, adult.CNhs10471.38-12B526.54
thymus, embryo E14.CNhs11041.402-44I454.33
thymus, embryo E15.CNhs11005.430-45I240.98
thymus, embryo E16.CNhs11002.456-26C526.89
thymus, embryo E17.CNhs10581.478-18C124.88
thymus, embryo E18.CNhs10595.1273-19G423.25
thymus, neonate N02.CNhs11181.1541-43F818.03
thymus, neonate N03.CNhs11137.2104-43C716.39
thymus, neonate N06.CNhs11197.681-26C413.33
thymus, neonate N07.CNhs11211.713-19D313.34
thymus, neonate N10.CNhs11194.748-24E413.81
thymus, neonate N20.CNhs11186.820-7A215.89
thymus, neonate N25.CNhs11125.1362-25G713.76
thymus, neonate N30.CNhs11132.1393-42G212.74
tongue, adult.CNhs10499.32-1B4119.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H375.92
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F744.95
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G590.32
urinary bladder, adult.CNhs10481.879-12E499.88
uterus, adult pregnant day19.CNhs10497.590-15F5105.85
uterus, adult.CNhs10509.92-27E5108.98
vagina, adult.CNhs10502.89-27D5123.69
vesicular gland, adult.CNhs10491.51-27F886.27
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1502.63
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2439.61
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3451.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7433.24
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4517.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5566.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6531.92
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7515.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8575.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9596.46
whole body, embryo E11.CNhs11014.324-5I884.90
whole body, embryo E12.CNhs10587.857-27C9101.35
whole body, embryo E13.CNhs10512.372-23H286.73
whole body, embryo E14.5.CNhs10578.420-27D293.60
whole body, embryo E14.CNhs10519.395-14B1110.26
whole body, embryo E16.CNhs10514.453-14F2127.22
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5100.46
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G597.25
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5104.94
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G597.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5100.12
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G599.78
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G585.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G595.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G592.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G597.16
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G599.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G592.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G597.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G593.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G579.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G581.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G581.31
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G592.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G597.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G595.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G592.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G580.76
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G585.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5102.13
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5102.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G589.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G583.89
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G594.05
whole body, embryo E17.5.CNhs10513.490-9F995.49
whole body, embryo E17.CNhs10517.475-3I5120.66
whole body, embryo E18.CNhs10516.493-3B3102.70
whole body, neonate N00.CNhs10525.657-19C2107.87
whole body, neonate N01.CNhs10576.659-23C6104.63
whole body, neonate N06.CNhs10515.692-21D1102.58
whole body, neonate N10.CNhs10518.761-6B4111.76





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.49e-1333
neuronal stem cell3.49e-1333
neuroblast3.49e-1333
electrically signaling cell3.49e-1333
ectodermal cell3.55e-1344
neurectodermal cell3.55e-1344
neural cell5.90e-1343
electrically responsive cell1.98e-1239
electrically active cell1.98e-1239
embryonic cell1.50e-1170
CNS neuron (sensu Vertebrata)1.34e-1023
neuroblast (sensu Vertebrata)1.34e-1023

Uber anatomy
Ontology termp-valuen
nervous system3.00e-2575
central nervous system1.62e-2473
ectoderm-derived structure6.02e-2395
ectoderm6.02e-2395
presumptive ectoderm6.02e-2395
regional part of nervous system7.07e-1854
neural tube1.14e-1652
neural rod1.14e-1652
future spinal cord1.14e-1652
neural keel1.14e-1652
gray matter7.27e-1634
ecto-epithelium1.54e-1573
neurectoderm1.63e-1564
neural plate1.63e-1564
presumptive neural plate1.63e-1564
brain4.98e-1447
future brain4.98e-1447
regional part of brain1.28e-1346
brain grey matter2.15e-1329
regional part of telencephalon2.15e-1329
telencephalon2.15e-1329
anterior neural tube3.14e-1240
structure with developmental contribution from neural crest8.77e-1292
regional part of forebrain1.19e-1139
forebrain1.19e-1139
future forebrain1.19e-1139
pre-chordal neural plate2.41e-1049
cerebral cortex1.36e-0921
cerebral hemisphere1.36e-0921
pallium1.36e-0921
anatomical conduit1.12e-08122
organ system subdivision1.32e-08194
regional part of cerebral cortex2.10e-0817
occipital lobe4.41e-0810
visual cortex4.41e-0810
neocortex4.41e-0810
tube5.35e-08114
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