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FFCP PHASE1:Mm9::chr8:86423857..86423868,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:86423857..86423868,+
|DHSsupport=NA
|short_description=p7@Lphn1
|DPIdataset=NA
|description=CAGE_peak_7_at_Lphn1_5end
|association_with_transcript=-128bp_to_NM_181039,uc009mlg.2,uc009mlh.2_5end
|EntrezGene=330814
|EntrezGene=330814
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q80TR1
|UniProt=Q80TR1
|association_with_transcript=-128bp_to_NM_181039,uc009mlg.2,uc009mlh.2_5end
|cluster_id=chr8:86423857..86423868,+
|description=CAGE_peak_7_at_Lphn1_5end
|id=chr8:86423857..86423868,+
|ontology_enrichment_celltype=CL:0000117!4.89e-16!23;CL:0000337!4.89e-16!23;CL:0000221!9.92e-13!44;CL:0000133!9.92e-13!44;CL:0002319!1.27e-12!43;CL:0000540!8.50e-12!33;CL:0000047!8.50e-12!33;CL:0000031!8.50e-12!33;CL:0000404!8.50e-12!33;CL:0000055!9.55e-11!50;CL:0000393!2.69e-10!39;CL:0000211!2.69e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-38,23;CL:0000337,1.02e-38,23;CL:0000540,5.79e-25,33;CL:0000047,5.79e-25,33;CL:0000031,5.79e-25,33;CL:0000404,5.79e-25,33;CL:0002319,2.13e-23,43;CL:0000221,1.07e-22,44;CL:0000133,1.07e-22,44;CL:0000393,4.09e-20,39;CL:0000211,4.09e-20,39;CL:0002321,1.05e-12,70;CL:0002609,6.56e-10,6;CL:0002612,7.20e-07,3;CL:0002610,7.86e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.00e-25!73;UBERON:0005743!9.00e-25!73;UBERON:0000073!4.83e-24!75;UBERON:0001016!4.83e-24!75;UBERON:0001049!3.88e-22!52;UBERON:0005068!3.88e-22!52;UBERON:0006241!3.88e-22!52;UBERON:0007135!3.88e-22!52;UBERON:0002346!1.02e-21!71;UBERON:0003075!1.02e-21!71;UBERON:0007284!1.02e-21!71;UBERON:0000955!1.29e-20!50;UBERON:0006238!1.29e-20!50;UBERON:0002616!5.11e-20!49;UBERON:0004121!6.94e-20!102;UBERON:0000924!6.94e-20!102;UBERON:0006601!6.94e-20!102;UBERON:0002020!6.79e-19!34;UBERON:0000033!2.87e-18!63;UBERON:0002780!9.68e-17!39;UBERON:0001890!9.68e-17!39;UBERON:0006240!9.68e-17!39;UBERON:0003080!1.29e-16!40;UBERON:0003056!5.45e-16!49;UBERON:0002791!3.30e-15!29;UBERON:0003528!3.30e-15!29;UBERON:0001893!3.30e-15!29;UBERON:0000153!1.50e-11!94;UBERON:0007811!2.13e-11!86;UBERON:0000956!2.51e-10!21;UBERON:0001869!2.51e-10!21;UBERON:0000203!2.51e-10!21;UBERON:0002619!2.01e-08!17;UBERON:0000025!5.95e-08!114
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.73e-36,34;UBERON:0001017,1.17e-35,73;UBERON:0001016,1.99e-34,75;UBERON:0000073,1.07e-33,54;UBERON:0001049,3.59e-30,52;UBERON:0005068,3.59e-30,52;UBERON:0006241,3.59e-30,52;UBERON:0007135,3.59e-30,52;UBERON:0003528,3.20e-27,29;UBERON:0002791,3.20e-27,29;UBERON:0001893,3.20e-27,29;UBERON:0004121,5.84e-25,95;UBERON:0000924,5.84e-25,95;UBERON:0006601,5.84e-25,95;UBERON:0002780,1.90e-24,39;UBERON:0001890,1.90e-24,39;UBERON:0006240,1.90e-24,39;UBERON:0003080,1.17e-23,40;UBERON:0002346,7.42e-23,64;UBERON:0003075,7.42e-23,64;UBERON:0007284,7.42e-23,64;UBERON:0000955,1.71e-22,47;UBERON:0006238,1.71e-22,47;UBERON:0002616,2.78e-21,46;UBERON:0010371,5.86e-19,73;UBERON:0003056,5.11e-18,49;UBERON:0000956,1.33e-15,21;UBERON:0001869,1.33e-15,21;UBERON:0000203,1.33e-15,21;UBERON:0002420,1.53e-13,8;UBERON:0007245,1.53e-13,8;UBERON:0010009,1.53e-13,8;UBERON:0010011,1.53e-13,8;UBERON:0000454,1.53e-13,8;UBERON:0010314,2.89e-13,92;UBERON:0002619,5.82e-13,17;UBERON:0002240,8.94e-12,6;UBERON:0005174,8.94e-12,6;UBERON:0001137,8.94e-12,6;UBERON:0002021,9.64e-11,10;UBERON:0000411,9.64e-11,10;UBERON:0001950,9.64e-11,10;UBERON:0000025,1.20e-10,114;UBERON:0001948,1.62e-10,5;UBERON:0002315,1.62e-10,5;UBERON:0004111,2.21e-09,122;UBERON:0000369,8.06e-09,5;UBERON:0002435,8.06e-09,5;UBERON:0000204,8.06e-09,5;UBERON:0010082,8.06e-09,5;UBERON:0011216,8.59e-09,194;UBERON:0003076,6.17e-07,12;UBERON:0003057,6.17e-07,12;UBERON:0002257,7.20e-07,3;UBERON:0004684,7.86e-07,3;UBERON:0002275,7.86e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,1.19060606211498,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0.782391344348039,0.218025156380447,1.09843091367236,0.777719596297134,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,0,1.61853168687678,2.11596391708813,6.33831403506179,0.338844532069132,0,0,0,0,2.39680088414724,3.45796474789399,1.14058573539325,1.4850653216486,1.47227472945967,4.57041575046086,4.41737081903227,1.71487118900936,1.82106394934649,2.75765635983006,3.30347642998166,2.55374676170375,4.91540906419979,1.97829431595291,3.20206752608434,1.04182674111352,1.95428099300967,1.68828783009504,3.97275444219706,5.89257170947335,4.6982654663704,2.05039390407831,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.520455980298408,0,0.461230994512117,0.452167921657868,0.823120949949934,0.376999773989026,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0.11981512450592,0,0,0.299581278809645,1.37250180845588,3.26701315493447,0.869121600961382,1.02286182932132,1.66230435647648,1.62241263067758,0.407357455401265,0.124406970610093,0,0.631325567659422,0,0,0.540186389416048,0.150704817835715,0.95251098811859,0.2562274405697,0.655912071918102,0.776110112217047,0.646703978798527,0.567318240503458,0.351902248327898,0.43839146485515,0,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.207125772535502,0,0,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.324275238183423,0.292399974850665,0,0,0.630869845692382,0.720332286654991,0,0,0.639864751605702,0.464473343720877,0.515469845288373,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0.442655759869801,0,0.156998727841375,0,0.296452627087149,0.667380422864376,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.947457058852424,0.488894929326078,0.339490171550376,0.234690248288502,0.670025029767263,1.19021820443007,0.780534591431195,0,0.221464689648775,0.956728611944923,0,0,1.01254341007058,0,0,0,0,0.642202359951168,1.05490517932983,0.491804836130026,0.504941854408746,0,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0.395287777946524,1.60660658210904,0.567760340833074,0.35613120733451,0.81443479676788,0,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0.776152102696527,0.214337035031592,0.532020700926821,0.178368817602071,1.15184314421485,0.608929898229199,0,0,0,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.324016022465404,0.209088296014469,0,0.269728692769641,0.165306911450672,0.523511883968059,0,0,0.56369293868419,1.19613236835183,0.496375471371293,0.388902376688095,0.516639293910924,1.01373675294467,1.64300134104056,1.69265700297135,0.838874755405687,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0.288635524920988,0.233753804363138,0,0,0.538283139656854,0.335769232728157,0.19318959403219,0,1.09890974560359,0,0,1.6942555278512,2.30162618253588,0,3.43706364687375,2.05524755931193,1.5107877947794,1.35004500046361,2.70192721934532,3.17199686288943,0.51776031175182,0.207574695168353,0.798049746802062,0.170733605754134,1.21553358534147,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.468207537349412,0.832326981263301,0.459483751644906,0,0.347652977834566,0.38581844092741,0,0.588795680537589,0,0.354951612318675,0.953744759789284,0,0.282328141245992,0.507687647350059,0,0,0.543216455383447,0,0.355905054372522,0.29551344712669,0,0.619747364743864,0.771626443924566,0.499621155875892,0.701794825336225,0.644613162144895,0.765153328275374,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,1.19060606211498,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0.782391344348039,0.218025156380447,1.09843091367236,0.777719596297134,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,0,1.61853168687678,2.11596391708813,6.33831403506179,0.338844532069132,0,0,0,0,2.39680088414724,3.45796474789399,1.14058573539325,1.4850653216486,1.47227472945967,4.57041575046086,4.41737081903227,1.71487118900936,1.82106394934649,2.75765635983006,3.30347642998166,2.55374676170375,4.91540906419979,1.97829431595291,3.20206752608434,1.04182674111352,1.95428099300967,1.68828783009504,3.97275444219706,5.89257170947335,4.6982654663704,2.05039390407831,0.151452386666368,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.520455980298408,0,0.461230994512117,0.452167921657868,0.823120949949934,0.376999773989026,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0.11981512450592,0,0,0.299581278809645,1.37250180845588,3.26701315493447,0.869121600961382,1.02286182932132,1.66230435647648,1.62241263067758,0.407357455401265,0.124406970610093,0,0.631325567659422,0,0,0.540186389416048,0.150704817835715,0.95251098811859,0.2562274405697,0.655912071918102,0.776110112217047,0.646703978798527,0.567318240503458,0.351902248327898,0.43839146485515,0,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.207125772535502,0,0,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.324275238183423,0.292399974850665,0,0,0.630869845692382,0.720332286654991,0,0,0.639864751605702,0.464473343720877,0.515469845288373,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0.442655759869801,0,0.156998727841375,0,0.296452627087149,0.667380422864376,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.947457058852424,0.488894929326078,0.339490171550376,0.234690248288502,0.670025029767263,1.19021820443007,0.780534591431195,0,0.221464689648775,0.956728611944923,0,0,1.01254341007058,0,0,0,0,0.642202359951168,1.05490517932983,0.491804836130026,0.504941854408746,0,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0.395287777946524,1.60660658210904,0.567760340833074,0.35613120733451,0.81443479676788,0,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0.776152102696527,0.214337035031592,0.532020700926821,0.178368817602071,1.15184314421485,0.608929898229199,0,0,0,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.324016022465404,0.209088296014469,0,0.269728692769641,0.165306911450672,0.523511883968059,0,0,0.56369293868419,1.19613236835183,0.496375471371293,0.388902376688095,0.516639293910924,1.01373675294467,1.64300134104056,1.69265700297135,0.838874755405687,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0.288635524920988,0.233753804363138,0,0,0.538283139656854,0.335769232728157,0.19318959403219,0,1.09890974560359,0,0,1.6942555278512,2.30162618253588,0,3.43706364687375,2.05524755931193,1.5107877947794,1.35004500046361,2.70192721934532,3.17199686288943,0.51776031175182,0.207574695168353,0.798049746802062,0.170733605754134,1.21553358534147,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.468207537349412,0.832326981263301,0.459483751644906,0,0.347652977834566,0.38581844092741,0,0.588795680537589,0,0.354951612318675,0.953744759789284,0,0.282328141245992,0.507687647350059,0,0,0.543216455383447,0,0.355905054372522,0.29551344712669,0,0.619747364743864,0.771626443924566,0.499621155875892,0.701794825336225,0.644613162144895,0.765153328275374,0,0
|short_description=p7@Lphn1
}}
}}

Latest revision as of 20:52, 25 September 2015

Short description:p7@Lphn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Lphn1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -128bp_to_NM_181039, uc009mlg.2, uc009mlh.2_5end
EntrezGene:Lphn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Lphn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter3.73e-3634
central nervous system1.17e-3573
nervous system1.99e-3475
regional part of nervous system1.07e-3354
neural tube3.59e-3052
neural rod3.59e-3052
future spinal cord3.59e-3052
neural keel3.59e-3052
brain grey matter3.20e-2729
regional part of telencephalon3.20e-2729
telencephalon3.20e-2729
ectoderm-derived structure5.84e-2595
ectoderm5.84e-2595
presumptive ectoderm5.84e-2595
regional part of forebrain1.90e-2439
forebrain1.90e-2439
future forebrain1.90e-2439
anterior neural tube1.17e-2340
neurectoderm7.42e-2364
neural plate7.42e-2364
presumptive neural plate7.42e-2364
brain1.71e-2247
future brain1.71e-2247
regional part of brain2.78e-2146
ecto-epithelium5.86e-1973
pre-chordal neural plate5.11e-1849
cerebral cortex1.33e-1521
cerebral hemisphere1.33e-1521
pallium1.33e-1521
basal ganglion1.53e-138
nuclear complex of neuraxis1.53e-138
aggregate regional part of brain1.53e-138
collection of basal ganglia1.53e-138
cerebral subcortex1.53e-138
structure with developmental contribution from neural crest2.89e-1392
regional part of cerebral cortex5.82e-1317
spinal cord8.94e-126
dorsal region element8.94e-126
dorsum8.94e-126
occipital lobe9.64e-1110
visual cortex9.64e-1110
neocortex9.64e-1110
tube1.20e-10114
regional part of spinal cord1.62e-105
gray matter of spinal cord1.62e-105
anatomical conduit2.21e-09122
corpus striatum8.06e-095
striatum8.06e-095
ventral part of telencephalon8.06e-095
future corpus striatum8.06e-095
organ system subdivision8.59e-09194
posterior neural tube6.17e-0712
chordal neural plate6.17e-0712
ventral horn of spinal cord7.20e-073
raphe nuclei7.86e-073
reticular formation7.86e-073
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