FF:11933-125I7: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005191 | ||
| | |DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005191 | ||
|accession_numbers=CAGE;DRX008384;DRR009256;DRZ000681;DRZ002066;DRZ012031;DRZ013416 | |||
|accession_numbers_RNASeq=RNA-Seq;DRX057151;DRR062910;DRZ007986 | |||
| | |||
| | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000197,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000710,CL:0000255,CL:0002077,CL:0000098,CL:0002167 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0200002 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.91!90.47!PRRX1;;chr2:223163706..223163730,-!p1@PAX3!1.89!76.74!PAX3;;chr14:37131058..37131139,+!p1@PAX9!1.78!59.48!PAX9;;chr1:170633348..170633399,+!p2@PRRX1!1.71!67.80!PRRX1;;chr20:55204351..55204377,+!p1@TFAP2C!1.63!51.99!TFAP2C;;chr14:61116183..61116208,-!p1@SIX1!1.62!149.53!SIX1;;chr7:19157248..19157268,-!p1@TWIST1!1.62!108.14!TWIST1;;chr9:132427972..132428056,+!p1@PRRX2!1.53!42.43!PRRX2;;chr6:10412600..10412637,-!p1@TFAP2A!1.50!50.33!TFAP2A;;chr9:96717629..96717644,-!p1@BARX1!1.48!29.53!BARX1;;chr6:50786591..50786614,+!p1@TFAP2B!1.46!28.08!TFAP2B;;chr9:132427883..132427951,+!p2@PRRX2!1.44!26.83!PRRX2;;chr1:170633262..170633285,+!p3@PRRX1!1.41!27.87!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!1.39!507.45!AEBP1;;chr6:50789717..50789729,+!p4@TFAP2B!1.37!22.67!TFAP2B;;chr8:99956662..99956684,+!p1@OSR2!1.33!30.78!OSR2;;chr7:44143978..44143989,+!p2@AEBP1!1.32!35.77!AEBP1;;chr15:96869255..96869291,+!p6@NR2F2!1.29!33.48!NR2F2;;chr1:170633058..170633084,+!p5@PRRX1!1.28!17.89!PRRX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.25!85.89!CREB3L1;;chr17:1959369..1959388,+!p2@HIC1!1.25!44.09!HIC1;;chr14:95236551..95236576,-!p2@GSC!1.25!16.85!GSC;;chr7:44143997..44144008,+!p3@AEBP1!1.23!20.38!AEBP1;;chr1:170632723..170632739,+!p8@PRRX1!1.23!15.81!PRRX1;;chr15:57511609..57511651,+!p2@TCF12!1.21!25.37!TCF12;;chr1:170632959..170632987,+!p4@PRRX1!1.21!16.64!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!1.20!14.97!PRRX1;;chr6:10415276..10415341,-!p2@TFAP2A!1.19!17.89!TFAP2A;;chr1:170632477..170632506,+!p6@PRRX1!1.19!14.56!PRRX1;;chr11:44331576..44331650,-!p1@ALX4!1.17!13.93!ALX4;;chr15:96873984..96873999,+!p3@NR2F2!1.15!95.67!NR2F2;;chr1:170632439..170632465,+!p11@PRRX1!1.15!13.10!PRRX1;;chr12:104531823..104531849,-!p5@NFYB!1.12!25.37!NFYB;;chr3:128212033..128212051,-!p1@GATA2!1.12!12.06!GATA2;;chr12:115121962..115121987,-!p1@TBX3!1.10!97.95!TBX3;;chr6:50786571..50786590,+!p2@TFAP2B!1.10!11.65!TFAP2B;;chr19:13134772..13134822,+!p2@NFIX!1.09!16.64!NFIX;;chr6:10412392..10412409,-!p4@TFAP2A!1.09!12.89!TFAP2A;;chr6:1389789..1389821,+!p1@FOXF2!1.08!15.18!FOXF2;;chr2:46524537..46524553,+!p1@EPAS1!1.07!1072.09!EPAS1;;chr11:46299539..46299620,+!p2@CREB3L1!1.07!18.09!CREB3L1;;chr6:126240380..126240430,+!p2@NCOA7!1.05!26.83!NCOA7;;chr12:80085061..80085119,-!p6@PAWR!1.05!16.64!PAWR;;chr3:128206762..128206781,-!p2@GATA2!1.04!62.39!GATA2;;chr3:25470156..25470227,+!p2@RARB!1.04!9.98!RARB;;chr2:45236540..45236577,-!p1@SIX2!1.03!9.77!SIX2;;chr1:170632250..170632277,+!p7@PRRX1!1.02!9.57!PRRX1;;chr8:72756667..72756736,-!p2@MSC!1.01!14.56!MSC;;chr6:50786547..50786564,+!p3@TFAP2B!1.01!9.15!TFAP2B;;chr14:37126765..37126799,+!p2@PAX9!0.99!8.73!PAX9;;chr1:170632137..170632172,+!p10@PRRX1!0.98!8.53!PRRX1;;chr1:935398..935465,-!p2@HES4!0.97!17.47!HES4;;chr16:86544113..86544145,+!p1@FOXF1!0.97!10.40!FOXF1;;chr15:96875041..96875052,+!p17@NR2F2!0.96!11.85!NR2F2;;chr5:158526917..158526932,-!p1@EBF1!0.95!20.17!EBF1;;chr5:72744445..72744466,-!p2@FOXD1!0.95!13.52!FOXD1;;chr1:170632115..170632136,+!p9@PRRX1!0.95!7.90!PRRX1;;chr15:96874012..96874042,+!p2@NR2F2!0.94!72.58!NR2F2;;chr16:86600426..86600441,+!p1@FOXC2!0.94!19.76!FOXC2;;chr15:96876966..96877017,+!p12@NR2F2!0.94!11.23!NR2F2;;chr11:12696071..12696086,+!p3@TEAD1!0.94!10.19!TEAD1;;chr14:95236440..95236465,-!p1@GSC!0.93!7.49!GSC;;chr1:110613238..110613272,-!p1@ALX3!0.92!7.28!ALX3;;chr1:170632647..170632659,+!p17@PRRX1!0.92!7.28!PRRX1;;chr12:85673977..85674015,+!p1@ALX1!0.92!7.28!ALX1;;chr3:141121847..141121868,+!p5@ZBTB38!0.90!10.81!ZBTB38;;chr10:63809013..63809041,+!p3@ARID5B!0.89!39.93!ARID5B;;chr5:321810..321877,+!p1@AHRR!0.89!22.46!AHRR;;chr2:208030647..208030689,-!p1@KLF7!0.88!58.65!KLF7;;chr8:77593474..77593612,+!p1@ZFHX4!0.88!29.53!ZFHX4;;chr8:72756063..72756125,-!p1@MSC!0.88!13.73!MSC;;chr6:126240442..126240459,+!p4@NCOA7!0.88!8.53!NCOA7;;chr3:157823517..157823562,-!p1@SHOX2!0.88!7.07!SHOX2;;chr15:96874927..96874938,+!p8@NR2F2!0.87!14.35!NR2F2;;chr6:1610293..1610310,+!p1@FOXC1!0.87!11.02!FOXC1;;chr8:72756637..72756664,-!p3@MSC!0.87!7.28!MSC;;chrY:21906594..21906622,-!p1@KDM5D!0.87!6.45!KDM5D;;chr10:63809106..63809127,+!p1@ARID5B!0.85!86.72!ARID5B;;chr15:96874145..96874166,+!p7@NR2F2!0.85!12.06!NR2F2;;chr15:96869292..96869320,+!p15@NR2F2!0.85!8.94!NR2F2;;chr14:61116168..61116180,-!p2@SIX1!0.85!7.07!SIX1;;chr10:63853436..63853442,+!p4@ARID5B!0.84!33.69!ARID5B;;chr8:72756267..72756296,-!p4@MSC!0.84!8.94!MSC;;chr3:25469724..25469773,+!p1@RARB!0.84!8.73!RARB;;chr15:96869222..96869251,+!p18@NR2F2!0.84!7.07!NR2F2;;chr16:86600870..86600921,+!p2@FOXC2!0.83!5.82!FOXC2;;chr1:170632762..170632786,+!p13@PRRX1!0.83!5.82!PRRX1;;chr6:21597765..21597779,+!p2@SOX4!0.82!48.46!SOX4;;chr15:96869114..96869160,+!p11@NR2F2!0.82!7.90!NR2F2;;chr2:239756671..239756732,+!p1@TWIST2!0.81!18.51!TWIST2;;chr1:170632310..170632321,+!p15@PRRX1!0.81!5.41!PRRX1;;chr6:10412576..10412599,-!p5@TFAP2A!0.81!5.41!TFAP2A;;chr6:50786509..50786527,+!p5@TFAP2B!0.81!5.41!TFAP2B;;chr8:93074803..93074845,-!p1@RUNX1T1!0.81!5.41!RUNX1T1;;chr16:31076332..31076388,-!p3@ZNF668!0.79!5.20!ZNF668;;chr11:44331679..44331702,-!p2@ALX4!0.79!5.20!ALX4;;chr12:85674018..85674039,+!p3@ALX1!0.79!5.20!ALX1;;chr8:49833948..49833973,-!p2@SNAI2!0.78!34.73!SNAI2;;chr15:96873921..96873946,+!p1@NR2F2!0.77!153.27!NR2F2;;chr12:80084303..80084332,-!p1@PAWR!0.77!31.61!PAWR;;chr1:25256756..25256774,-!p1@RUNX3!0.77!9.77!RUNX3;;chr6:126240463..126240489,+!p6@NCOA7!0.77!5.62!NCOA7;;chr2:85360499..85360598,+!p1@TCF7L1!0.76!29.32!TCF7L1;;chr2:19558373..19558392,-!p1@OSR1!0.76!14.14!OSR1;;chr10:114710218..114710229,+!p4@TCF7L2!0.76!9.98!TCF7L2;;chr8:93074848..93074871,-!p3@RUNX1T1!0.76!4.78!RUNX1T1;;chr15:96869206..96869220,+!p21@NR2F2!0.76!4.78!NR2F2;;chr12:80084737..80084763,-!p3@PAWR!0.75!19.13!PAWR;;chr12:104531854..104531893,-!p2@NFYB!0.75!18.30!NFYB;;chr14:37126814..37126834,+!p4@PAX9!0.75!4.58!PAX9;;chr20:50179368..50179392,-!p2@NFATC2!0.74!6.03!NFATC2;;chr10:114710098..114710130,+!p2@TCF7L2!0.73!37.02!TCF7L2;;chr7:19157043..19157088,-!p2@TWIST1!0.73!12.06!TWIST1;;chr2:239756739..239756755,+!p2@TWIST2!0.73!7.90!TWIST2;;chr15:57511589..57511608,+!p4@TCF12!0.73!4.37!TCF12;;chr8:49833978..49833996,-!p1@SNAI2!0.72!98.58!SNAI2;;chr5:72744594..72744609,-!p1@FOXD1!0.72!21.63!FOXD1;;chr19:13136130..13136165,+!p6@NFIX!0.72!5.82!NFIX;;chr6:19837592..19837621,+!p1@ID4!0.71!28.08!ID4;;chr14:89628064..89628109,-!p4@FOXN3!0.71!9.15!FOXN3;;chr15:96869165..96869183,+!p20@NR2F2!0.71!4.16!NR2F2;;chr6:50786057..50786069,+!p9@TFAP2B!0.71!4.16!TFAP2B;;chr19:13136241..13136258,+!p7@NFIX!0.70!5.62!NFIX;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.69!44.30!GLIS2;;chr12:104531785..104531812,-!p3@NFYB!0.69!11.23!NFYB;;chr19:13134457..13134462,+!p5@NFIX!0.69!7.49!NFIX;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.69!3.95!SEBOX;;chr12:53625846..53625861,-!p6@RARG!0.69!3.95!RARG;;chr6:1389989..1390019,+!p2@FOXF2!0.69!3.95!FOXF2;;chr8:93115584..93115642,-!p5@RUNX1T1!0.69!3.95!RUNX1T1;;chr12:124873357..124873401,-!p1@NCOR2!0.68!50.12!NCOR2;;chr2:46602879..46602899,+!p8@EPAS1!0.68!4.78!EPAS1;;chr1:110613276..110613299,-!p2@ALX3!0.68!3.74!ALX3;;chr8:72756023..72756055,-!p6@MSC!0.66!4.58!MSC;;chr3:141121820..141121838,+!p9@ZBTB38!0.66!3.54!ZBTB38;;chr19:45908292..45908374,-!p1@PPP1R13L!0.65!36.19!PPP1R13L;;chr6:144289132..144289134,-!p3@PLAGL1!0.65!8.94!PLAGL1;;chr10:63809077..63809089,+!p5@ARID5B!0.65!8.32!ARID5B;;chr9:4299552..4299598,-!p5@GLIS3!0.65!6.45!GLIS3;;chr1:158969752..158969780,+!p6@IFI16!0.64!6.45!IFI16;;chr1:170633194..170633205,+!p18@PRRX1!0.64!3.33!PRRX1;;chr9:96717678..96717689,-!p2@BARX1!0.64!3.33!BARX1;;chr5:158527104..158527135,-!p4@EBF1!0.64!3.33!EBF1;;chr15:96874216..96874236,+!p13@NR2F2!0.63!5.41!NR2F2;;chr8:72756213..72756243,-!p5@MSC!0.63!4.37!MSC;;chr2:8822176..8822196,+!p1@ID2!0.62!534.28!ID2;;chr19:45971246..45971265,+!p1@FOSB!0.62!70.92!FOSB;;chr12:124873852..124873881,-!p3@NCOR2!0.62!22.67!NCOR2;;chr15:96874244..96874259,+!p5@NR2F2!0.62!8.73!NR2F2;;chr6:45390025..45390076,+!p2@RUNX2!0.62!8.53!RUNX2;;chr14:24837368..24837401,+!p1@NFATC4!0.62!8.32!NFATC4;;chr10:70320074..70320106,+!p1@TET1!0.62!7.07!TET1;;chr15:96874063..96874074,+!p10@NR2F2!0.62!6.45!NR2F2;;chr7:28220198..28220269,-!p2@JAZF1!0.61!32.65!JAZF1;;chr6:50789737..50789746,+!p10@TFAP2B!0.61!3.12!TFAP2B;;chr8:72756380..72756427,-!p8@MSC!0.61!3.12!MSC;;chr2:45236579..45236596,-!p2@SIX2!0.61!3.12!SIX2;;chr3:157824001..157824078,-!p2@SHOX2!0.61!3.12!SHOX2;;chr6:36355513..36355578,-!p2@ETV7!0.60!3.95!ETV7;;chr12:115122005..115122016,-!p3@TBX3!0.60!3.74!TBX3;;chr19:13106214..13106382,+!p1@NFIX!0.59!82.56!NFIX;;chr14:62162285..62162296,+!p3@HIF1A!0.59!17.89!HIF1A;;chr3:37217736..37217753,-!p2@LRRFIP2!0.59!14.35!LRRFIP2;;chr17:59477233..59477263,+!p1@TBX2!0.59!10.40!TBX2;;chr11:12696002..12696022,+!p2@TEAD1!0.59!8.11!TEAD1;;chr9:102584262..102584276,+!p1@NR4A3!0.59!7.28!NR4A3;;chr2:46524506..46524514,+!p5@EPAS1!0.59!6.03!EPAS1;;chr6:1612300..1612324,+!p3@FOXC1!0.59!2.91!FOXC1;;chr7:1577076..1577095,+!p5@MAFK!0.59!2.91!MAFK;;chrY:2803415..2803468,+!p1@ZFY!0.59!2.91!ZFY;;chr1:119530493..119530572,-!p1@TBX15!0.59!2.91!TBX15;;chr1:170633100..170633112,+!p19@PRRX1!0.59!2.91!PRRX1;;chr14:62203595..62203676,+!p4@HIF1A!0.58!5.82!HIF1A;;chr11:65686802..65686818,+!p6@DRAP1!0.58!5.41!DRAP1;;chr7:6655225..6655279,+!p1@ENST00000457543!0.58!4.58!ZNF853;;chr17:46126136..46126152,+!p1@NFE2L1!0.57!174.90!NFE2L1;;chr10:114709999..114710031,+!p1@TCF7L2!0.57!79.65!TCF7L2;;chr14:62162258..62162269,+!p2@HIF1A!0.57!32.24!HIF1A;;chr1:164528410..164528428,+!p1@PBX1!0.57!25.16!PBX1;;chr3:178789522..178789564,-!p2@ZMAT3!0.57!24.33!ZMAT3;;chr2:85981222..85981259,+!p2@ATOH8!0.57!4.99!ATOH8;;chr2:46602901..46602926,+!p7@EPAS1!0.57!3.95!EPAS1;;chr7:1577899..1577943,+!p3@MAFK!0.57!2.70!MAFK;;chr11:46333934..46333963,+!p5@CREB3L1!0.57!2.70!CREB3L1;;chr12:115122318..115122331,-!p2@TBX3!0.57!2.70!TBX3;;chr5:138647473..138647476,+!p6@MATR3!0.56!7.69!MATR3;;chr6:21593973..21593988,+!p1@SOX4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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000710;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002077;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002167 | |||
|ffid_belonging_in_development=CL:0000133,CL:0000221 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 66: | Line 43: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor1.CNhs13816.11933-125I7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor1.CNhs13816.11933-125I7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor1.CNhs13816.11933-125I7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor1.CNhs13816.11933-125I7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor1.CNhs13816.11933-125I7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11933-125I7 | |||
|is_a=FF:0000002;;FF:0000210;;FF:0200002 | |is_a=FF:0000002;;FF:0000210;;FF:0200002 | ||
|is_obsolete= | |||
|library_id=CNhs13816 | |||
|library_id_phase_based=2:CNhs13816 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11933 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11933 | |||
|name=Olfactory epithelial cells, donor1 | |||
|namespace= | |namespace= | ||
|part_of= | |part_of= | ||
|profile_cagescan= | |||
|profile_hcage=CNhs13816,LSID1092,release014,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq= | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.265178186717961,0,0.0322370177610921,-0.0462791848189842,0,0,0,0,0,0,0,0,0,0,0,0.762177960216572,0,0.415303551029283,0,0,0,0,0,-0.0159014378347718,0,0,0.176642560175744,0,0,0,0,0,0,0,0,0,0,0.0820564584332857,0,0.0204018145685557,0,0.0820564584332857,0,0,0,0,0,0,0.081066302592536,0,0,0,0.0820564584332857,0,0.0737141707818466,0.0820564584332857,0.113570286168136,0,0,0.212255522741509,0.0820564584332857,0,0,0,0,0,0,0,0.309599149954606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00980826376777622,0.0802439202187695,0.0410282292166428,0,0.00299140151994459,-0.0714021541369715,0.0740856404933666,0.0755226895746175,0.69473207941014,0,0.0820564584332857,-0.0159788928044207,0.0374040640775607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0.0820564584332857,0,0,-0.000316934599061042,-0.0914010741557194,0,0,0,0,0,0 | |||
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| |||
|rna_box=125 | |||
|rna_catalog_number= | |||
|rna_concentration=1.248 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | |||
|rna_lot_number= | |||
|rna_od260/230=2.01 | |||
|rna_od260/280=2 | |||
|rna_position=I7 | |||
|rna_rin=9.6 | |||
|rna_sample_type=total RNA | |||
|rna_tube_id=125I7 | |||
|rna_weight_ug=11.232 | |||
|rnaseq_library_id=RDhi10094 | |||
|sample_age=59 | |||
|sample_category=primary cells | |||
|sample_cell_catalog= | |||
|sample_cell_line= | |||
|sample_cell_lot= | |||
|sample_cell_type=CELL MIXTURE - tissue sample | |||
|sample_collaboration=Christine Wells (University of Queensland) | |||
|sample_company= | |||
|sample_description= | |||
|sample_dev_stage= | |||
|sample_disease= | |||
|sample_donor(cell lot)= | |||
|sample_ethnicity=caucasian | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.80037650203108e-209!GO:0005737;cytoplasm;2.09479972177068e-175!GO:0043226;organelle;3.73058939542385e-164!GO:0043229;intracellular organelle;7.14446293711242e-164!GO:0043231;intracellular membrane-bound organelle;2.02362980133874e-159!GO:0043227;membrane-bound organelle;4.16983028810536e-159!GO:0044444;cytoplasmic part;2.4021976611123e-126!GO:0044422;organelle part;3.48225816435475e-110!GO:0044446;intracellular organelle part;6.20594233692417e-109!GO:0032991;macromolecular complex;1.36577278226193e-82!GO:0044237;cellular metabolic process;1.72346930518162e-77!GO:0044238;primary metabolic process;2.0507809504989e-77!GO:0030529;ribonucleoprotein complex;4.05024085790572e-76!GO:0043170;macromolecule metabolic process;1.02761310764256e-74!GO:0005515;protein binding;1.02761310764256e-74!GO:0005739;mitochondrion;1.2232454410427e-63!GO:0043233;organelle lumen;5.63078863945862e-59!GO:0031974;membrane-enclosed lumen;5.63078863945862e-59!GO:0003723;RNA binding;1.61609273569036e-57!GO:0005634;nucleus;2.71597060984979e-55!GO:0019538;protein metabolic process;1.74253208855124e-52!GO:0044428;nuclear part;2.11556128437239e-52!GO:0005840;ribosome;2.22644305136478e-49!GO:0006412;translation;1.4202414486847e-47!GO:0044260;cellular macromolecule metabolic process;2.77348555186483e-47!GO:0044267;cellular protein metabolic process;2.60002773343266e-46!GO:0031090;organelle membrane;1.45842809403237e-44!GO:0003735;structural constituent of ribosome;6.27821378160221e-44!GO:0016043;cellular component organization and biogenesis;1.71706488210469e-43!GO:0044429;mitochondrial part;2.47976377324438e-42!GO:0043234;protein complex;3.91885313137958e-41!GO:0015031;protein transport;5.82034550071281e-41!GO:0033036;macromolecule localization;1.15159038380292e-40!GO:0033279;ribosomal subunit;6.33736632209096e-39!GO:0043283;biopolymer metabolic process;3.67909808196922e-38!GO:0045184;establishment of protein localization;4.7212032748907e-38!GO:0008104;protein localization;5.4721544870221e-38!GO:0005829;cytosol;9.73147007168331e-37!GO:0009059;macromolecule biosynthetic process;4.57085882035562e-36!GO:0009058;biosynthetic process;5.5820586408996e-36!GO:0044249;cellular biosynthetic process;8.88614360930432e-36!GO:0010467;gene expression;1.86100000257003e-35!GO:0031967;organelle envelope;5.22294282858561e-35!GO:0006396;RNA processing;7.27956036379743e-35!GO:0031975;envelope;9.10493317081876e-35!GO:0031981;nuclear lumen;4.11027448216188e-33!GO:0046907;intracellular transport;4.65538536512242e-32!GO:0016071;mRNA metabolic process;2.20242334185759e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.84218590876609e-29!GO:0008380;RNA splicing;1.50930599584732e-28!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.59553076264753e-28!GO:0065003;macromolecular complex assembly;4.92768076989687e-28!GO:0006886;intracellular protein transport;2.47955622710126e-27!GO:0005740;mitochondrial envelope;3.62454164105814e-27!GO:0031966;mitochondrial membrane;5.2810574658368e-26!GO:0006397;mRNA processing;1.10248953869657e-25!GO:0019866;organelle inner membrane;1.56962705517483e-25!GO:0022607;cellular component assembly;2.06314398977777e-25!GO:0005743;mitochondrial inner membrane;4.26381802659649e-24!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.83690237947141e-24!GO:0043228;non-membrane-bound organelle;5.87091555136021e-24!GO:0043232;intracellular non-membrane-bound organelle;5.87091555136021e-24!GO:0006996;organelle organization and biogenesis;7.69227519719976e-24!GO:0044445;cytosolic part;4.00256067532083e-23!GO:0006119;oxidative phosphorylation;1.4402543540374e-21!GO:0005654;nucleoplasm;2.21012761029688e-21!GO:0015935;small ribosomal subunit;2.02803467744572e-20!GO:0005681;spliceosome;4.26212011570825e-20!GO:0044455;mitochondrial membrane part;6.20152242741991e-20!GO:0015934;large ribosomal subunit;1.3904753359237e-19!GO:0000166;nucleotide binding;2.80442929199268e-19!GO:0005783;endoplasmic reticulum;2.31412573555149e-18!GO:0051649;establishment of cellular localization;2.60564153779481e-18!GO:0051641;cellular localization;2.71605451619943e-18!GO:0008134;transcription factor binding;3.6120524387424e-18!GO:0048770;pigment granule;4.55685776181325e-18!GO:0042470;melanosome;4.55685776181325e-18!GO:0044451;nucleoplasm part;8.20237556541031e-18!GO:0031980;mitochondrial lumen;9.86925103428219e-18!GO:0005759;mitochondrial matrix;9.86925103428219e-18!GO:0022618;protein-RNA complex assembly;1.03579122927568e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.77982417803697e-17!GO:0016462;pyrophosphatase activity;4.02739767832821e-17!GO:0006457;protein folding;5.28464560800989e-17!GO:0003676;nucleic acid binding;5.57383384353098e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;5.79060575769937e-17!GO:0012505;endomembrane system;7.63219304892107e-17!GO:0017111;nucleoside-triphosphatase activity;8.93640046170587e-17!GO:0006512;ubiquitin cycle;1.13687888935608e-16!GO:0016874;ligase activity;1.17579146982567e-16!GO:0005746;mitochondrial respiratory chain;1.26825699679775e-16!GO:0051186;cofactor metabolic process;1.09919937170847e-15!GO:0006259;DNA metabolic process;1.64554832290932e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.70677934431134e-15!GO:0048193;Golgi vesicle transport;1.97819098432113e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.08093509540173e-15!GO:0008135;translation factor activity, nucleic acid binding;2.12502213300785e-15!GO:0044432;endoplasmic reticulum part;3.73854984170873e-15!GO:0050136;NADH dehydrogenase (quinone) activity;8.25743945309992e-15!GO:0003954;NADH dehydrogenase activity;8.25743945309992e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.25743945309992e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.17205924635968e-14!GO:0005794;Golgi apparatus;1.58945085377862e-14!GO:0043412;biopolymer modification;1.86107299635284e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.91846898401163e-14!GO:0019941;modification-dependent protein catabolic process;1.94868309641632e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.94868309641632e-14!GO:0043285;biopolymer catabolic process;2.26075484283898e-14!GO:0044257;cellular protein catabolic process;2.9871755598628e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.33332077811166e-14!GO:0044265;cellular macromolecule catabolic process;5.5748725586558e-14!GO:0000502;proteasome complex (sensu Eukaryota);1.16621520759342e-13!GO:0016070;RNA metabolic process;1.17155241225074e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.30931104110196e-13!GO:0032553;ribonucleotide binding;1.43784645882597e-13!GO:0032555;purine ribonucleotide binding;1.43784645882597e-13!GO:0030163;protein catabolic process;1.82799253802125e-13!GO:0017076;purine nucleotide binding;1.84393019409102e-13!GO:0005761;mitochondrial ribosome;2.66408324624559e-13!GO:0000313;organellar ribosome;2.66408324624559e-13!GO:0006605;protein targeting;3.43637343219321e-13!GO:0006464;protein modification process;5.72423771537029e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.72423771537029e-13!GO:0045271;respiratory chain complex I;5.72423771537029e-13!GO:0005747;mitochondrial respiratory chain complex I;5.72423771537029e-13!GO:0009057;macromolecule catabolic process;6.00565621016371e-13!GO:0042775;organelle ATP synthesis coupled electron transport;8.12039797752868e-13!GO:0042773;ATP synthesis coupled electron transport;8.12039797752868e-13!GO:0016192;vesicle-mediated transport;8.7902963279551e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.74362773424977e-12!GO:0005730;nucleolus;1.8024871554043e-12!GO:0003743;translation initiation factor activity;1.8843057936192e-12!GO:0006732;coenzyme metabolic process;2.66951253924557e-12!GO:0006413;translational initiation;4.17155172070569e-12!GO:0009055;electron carrier activity;4.43885992497814e-12!GO:0003712;transcription cofactor activity;1.15703501977943e-11!GO:0051082;unfolded protein binding;1.26149268762851e-11!GO:0043687;post-translational protein modification;1.97889039405817e-11!GO:0044248;cellular catabolic process;1.99434418919781e-11!GO:0048523;negative regulation of cellular process;3.47073993808374e-11!GO:0012501;programmed cell death;4.45296957623056e-11!GO:0005793;ER-Golgi intermediate compartment;5.4426387556015e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.26714667277031e-11!GO:0006915;apoptosis;1.14899052721471e-10!GO:0007049;cell cycle;1.70668522373354e-10!GO:0005524;ATP binding;2.31273060828651e-10!GO:0008639;small protein conjugating enzyme activity;2.67448790331253e-10!GO:0005789;endoplasmic reticulum membrane;2.81751700916217e-10!GO:0006366;transcription from RNA polymerase II promoter;3.29553877856572e-10!GO:0006446;regulation of translational initiation;3.53286997309507e-10!GO:0008565;protein transporter activity;3.72436652054504e-10!GO:0008219;cell death;3.72697835141728e-10!GO:0016265;death;3.72697835141728e-10!GO:0032559;adenyl ribonucleotide binding;3.93526805106549e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;4.22054642733612e-10!GO:0000375;RNA splicing, via transesterification reactions;4.22054642733612e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.22054642733612e-10!GO:0004842;ubiquitin-protein ligase activity;4.68175391300897e-10!GO:0030554;adenyl nucleotide binding;6.3792915680753e-10!GO:0019787;small conjugating protein ligase activity;6.45253407992022e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.07171359544371e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.85826637388323e-09!GO:0048519;negative regulation of biological process;2.14338157849935e-09!GO:0016604;nuclear body;2.67373323766641e-09!GO:0006913;nucleocytoplasmic transport;2.79950514809648e-09!GO:0009259;ribonucleotide metabolic process;2.99542442649376e-09!GO:0050794;regulation of cellular process;3.20835189892324e-09!GO:0051169;nuclear transport;5.6758793621334e-09!GO:0005635;nuclear envelope;6.56718981967069e-09!GO:0016881;acid-amino acid ligase activity;6.95828200426922e-09!GO:0006461;protein complex assembly;7.29658693118972e-09!GO:0006163;purine nucleotide metabolic process;8.58177687632531e-09!GO:0009150;purine ribonucleotide metabolic process;9.72956766771519e-09!GO:0031965;nuclear membrane;1.45276744458879e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.64796158009642e-08!GO:0003924;GTPase activity;1.7425993523393e-08!GO:0006974;response to DNA damage stimulus;1.94664424387683e-08!GO:0051246;regulation of protein metabolic process;2.15915978414035e-08!GO:0009260;ribonucleotide biosynthetic process;2.16257448359526e-08!GO:0006164;purine nucleotide biosynthetic process;2.45805367025361e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.65605576760127e-08!GO:0030120;vesicle coat;3.07632651360586e-08!GO:0030662;coated vesicle membrane;3.07632651360586e-08!GO:0005768;endosome;3.73253020561138e-08!GO:0009060;aerobic respiration;4.2465996115148e-08!GO:0015986;ATP synthesis coupled proton transport;4.53176105947729e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.53176105947729e-08!GO:0009199;ribonucleoside triphosphate metabolic process;5.40314266349994e-08!GO:0009141;nucleoside triphosphate metabolic process;6.31086484887369e-08!GO:0044453;nuclear membrane part;6.46837778245312e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.80570453095348e-08!GO:0009144;purine nucleoside triphosphate metabolic process;8.80570453095348e-08!GO:0048475;coated membrane;8.86606632151593e-08!GO:0030117;membrane coat;8.86606632151593e-08!GO:0045333;cellular respiration;8.88809221884007e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.91857415928626e-08!GO:0051188;cofactor biosynthetic process;1.01928311735633e-07!GO:0017038;protein import;1.14215669769542e-07!GO:0042254;ribosome biogenesis and assembly;1.16549329661666e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.23582131337153e-07!GO:0022402;cell cycle process;1.24903415655846e-07!GO:0042623;ATPase activity, coupled;1.43807533834093e-07!GO:0016607;nuclear speck;1.49890637290403e-07!GO:0016887;ATPase activity;1.51844376900398e-07!GO:0008361;regulation of cell size;1.51844376900398e-07!GO:0019829;cation-transporting ATPase activity;1.5828355038602e-07!GO:0046034;ATP metabolic process;2.00634236157902e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.18442338258111e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.18442338258111e-07!GO:0016049;cell growth;2.23230570958873e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.23570150682032e-07!GO:0043069;negative regulation of programmed cell death;2.94751154327254e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.12284909907266e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.52543728285435e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.55118987796495e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.55118987796495e-07!GO:0005788;endoplasmic reticulum lumen;3.71166256235188e-07!GO:0043066;negative regulation of apoptosis;4.03766988431157e-07!GO:0000074;regulation of progression through cell cycle;4.05159861201861e-07!GO:0006793;phosphorus metabolic process;4.21865683439519e-07!GO:0006796;phosphate metabolic process;4.21865683439519e-07!GO:0006399;tRNA metabolic process;4.41399753382663e-07!GO:0051726;regulation of cell cycle;4.42121940017404e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.6046139240413e-07!GO:0004812;aminoacyl-tRNA ligase activity;4.6046139240413e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.6046139240413e-07!GO:0042981;regulation of apoptosis;5.53266344647735e-07!GO:0043067;regulation of programmed cell death;6.07430446354847e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;6.11041344861019e-07!GO:0006754;ATP biosynthetic process;6.57708218533504e-07!GO:0006753;nucleoside phosphate metabolic process;6.57708218533504e-07!GO:0043038;amino acid activation;7.93657144665002e-07!GO:0006418;tRNA aminoacylation for protein translation;7.93657144665002e-07!GO:0043039;tRNA aminoacylation;7.93657144665002e-07!GO:0006916;anti-apoptosis;8.5001501684649e-07!GO:0009056;catabolic process;8.5001501684649e-07!GO:0051187;cofactor catabolic process;1.03425999890713e-06!GO:0032446;protein modification by small protein conjugation;1.06638691609334e-06!GO:0030036;actin cytoskeleton organization and biogenesis;1.11374767032274e-06!GO:0000151;ubiquitin ligase complex;1.11675828652752e-06!GO:0006099;tricarboxylic acid cycle;1.18127011291028e-06!GO:0046356;acetyl-CoA catabolic process;1.18127011291028e-06!GO:0016491;oxidoreductase activity;1.18162439868634e-06!GO:0016567;protein ubiquitination;1.18560135872275e-06!GO:0050789;regulation of biological process;1.20420449974668e-06!GO:0045786;negative regulation of progression through cell cycle;1.21590060035136e-06!GO:0004386;helicase activity;1.26133116867023e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.32283945804845e-06!GO:0001558;regulation of cell growth;1.4454834401852e-06!GO:0006323;DNA packaging;1.61901089628238e-06!GO:0016310;phosphorylation;1.65037723608573e-06!GO:0006281;DNA repair;1.72780473980933e-06!GO:0065002;intracellular protein transport across a membrane;1.84381114162234e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.8846558363523e-06!GO:0009109;coenzyme catabolic process;1.91302130020837e-06!GO:0016564;transcription repressor activity;1.99932752759978e-06!GO:0005643;nuclear pore;2.74803989797646e-06!GO:0044431;Golgi apparatus part;2.98307547514313e-06!GO:0008026;ATP-dependent helicase activity;2.99770350889998e-06!GO:0009117;nucleotide metabolic process;3.18673286639218e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.29321505774361e-06!GO:0009108;coenzyme biosynthetic process;3.91903791080629e-06!GO:0031324;negative regulation of cellular metabolic process;3.95808597006708e-06!GO:0003714;transcription corepressor activity;4.11114793089214e-06!GO:0030532;small nuclear ribonucleoprotein complex;4.3361593318909e-06!GO:0005525;GTP binding;4.53529442213322e-06!GO:0006084;acetyl-CoA metabolic process;4.54688059476589e-06!GO:0045259;proton-transporting ATP synthase complex;4.60188175168912e-06!GO:0009719;response to endogenous stimulus;5.47572885980634e-06!GO:0003713;transcription coactivator activity;6.59379760975939e-06!GO:0051276;chromosome organization and biogenesis;7.08477976153904e-06!GO:0005798;Golgi-associated vesicle;7.21226322540931e-06!GO:0005773;vacuole;7.26278639201819e-06!GO:0015980;energy derivation by oxidation of organic compounds;7.84513861925675e-06!GO:0031252;leading edge;8.63179808179648e-06!GO:0016023;cytoplasmic membrane-bound vesicle;8.74704771383274e-06!GO:0007005;mitochondrion organization and biogenesis;9.28805664517813e-06!GO:0030029;actin filament-based process;9.96855562407488e-06!GO:0031988;membrane-bound vesicle;1.01784302590557e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.02905744105631e-05!GO:0006752;group transfer coenzyme metabolic process;1.09989655428907e-05!GO:0008092;cytoskeletal protein binding;1.18974206391018e-05!GO:0005667;transcription factor complex;1.28615672252277e-05!GO:0004298;threonine endopeptidase activity;1.3166049462329e-05!GO:0051170;nuclear import;1.36585900915584e-05!GO:0051789;response to protein stimulus;1.38633552900592e-05!GO:0006986;response to unfolded protein;1.38633552900592e-05!GO:0009892;negative regulation of metabolic process;1.48363054374287e-05!GO:0065004;protein-DNA complex assembly;1.52881499238354e-05!GO:0006606;protein import into nucleus;1.61131075660598e-05!GO:0006091;generation of precursor metabolites and energy;1.80920516175199e-05!GO:0046930;pore complex;1.96092257228725e-05!GO:0005770;late endosome;2.11758685435378e-05!GO:0043566;structure-specific DNA binding;2.16599699451757e-05!GO:0000278;mitotic cell cycle;2.43561574860388e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.45523495539976e-05!GO:0000245;spliceosome assembly;2.52513147168434e-05!GO:0005762;mitochondrial large ribosomal subunit;2.81617102061264e-05!GO:0000315;organellar large ribosomal subunit;2.81617102061264e-05!GO:0016787;hydrolase activity;2.85905680399846e-05!GO:0050657;nucleic acid transport;2.93329274724176e-05!GO:0051236;establishment of RNA localization;2.93329274724176e-05!GO:0050658;RNA transport;2.93329274724176e-05!GO:0043623;cellular protein complex assembly;2.9595383361881e-05!GO:0006403;RNA localization;3.13368687491095e-05!GO:0032561;guanyl ribonucleotide binding;3.54408705001282e-05!GO:0019001;guanyl nucleotide binding;3.54408705001282e-05!GO:0005905;coated pit;4.0199843650206e-05!GO:0016563;transcription activator activity;4.14880367697015e-05!GO:0007243;protein kinase cascade;4.29306436016138e-05!GO:0048522;positive regulation of cellular process;4.37574444466251e-05!GO:0031982;vesicle;4.50677951566872e-05!GO:0031410;cytoplasmic vesicle;4.70612729263267e-05!GO:0006613;cotranslational protein targeting to membrane;4.70612729263267e-05!GO:0044440;endosomal part;5.78850367238762e-05!GO:0010008;endosome membrane;5.78850367238762e-05!GO:0040008;regulation of growth;6.41481199192865e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.4409443385423e-05!GO:0016740;transferase activity;8.22736968966867e-05!GO:0019843;rRNA binding;8.22736968966867e-05!GO:0003697;single-stranded DNA binding;8.35599989867283e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.54521304730333e-05!GO:0019867;outer membrane;8.54521304730333e-05!GO:0007010;cytoskeleton organization and biogenesis;8.9652271886764e-05!GO:0016481;negative regulation of transcription;9.19473259989923e-05!GO:0030133;transport vesicle;0.000103760703840377!GO:0006364;rRNA processing;0.000105617569517337!GO:0008654;phospholipid biosynthetic process;0.000105617569517337!GO:0016568;chromatin modification;0.000106507905173634!GO:0006333;chromatin assembly or disassembly;0.000107274140051089!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000111849289674356!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000115906136988778!GO:0031968;organelle outer membrane;0.000130403249617349!GO:0016072;rRNA metabolic process;0.000133279600424642!GO:0000323;lytic vacuole;0.000149142478483233!GO:0005764;lysosome;0.000149142478483233!GO:0005769;early endosome;0.00015432074815336!GO:0030867;rough endoplasmic reticulum membrane;0.000155729202520858!GO:0045454;cell redox homeostasis;0.000164411026698477!GO:0005694;chromosome;0.000184171558117217!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00021215571355824!GO:0000314;organellar small ribosomal subunit;0.00024693058442625!GO:0005763;mitochondrial small ribosomal subunit;0.00024693058442625!GO:0019222;regulation of metabolic process;0.000258306738553952!GO:0051427;hormone receptor binding;0.000269652520574817!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000272898070534448!GO:0003724;RNA helicase activity;0.000291387582622752!GO:0005741;mitochondrial outer membrane;0.000294676795517456!GO:0016859;cis-trans isomerase activity;0.000297506903525963!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000297506903525963!GO:0000139;Golgi membrane;0.000303391467406576!GO:0033116;ER-Golgi intermediate compartment membrane;0.000316089586535937!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000341111856745983!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000355170016942112!GO:0015399;primary active transmembrane transporter activity;0.000355170016942112!GO:0051028;mRNA transport;0.000361480881507921!GO:0005885;Arp2/3 protein complex;0.000363072298573338!GO:0007264;small GTPase mediated signal transduction;0.000378290115038075!GO:0048471;perinuclear region of cytoplasm;0.00038116092261083!GO:0016197;endosome transport;0.000413648246901658!GO:0043021;ribonucleoprotein binding;0.000443749241686487!GO:0030663;COPI coated vesicle membrane;0.000444483265837236!GO:0030126;COPI vesicle coat;0.000444483265837236!GO:0006260;DNA replication;0.000469526016373015!GO:0000785;chromatin;0.000476573348091586!GO:0035257;nuclear hormone receptor binding;0.000493024122089248!GO:0004576;oligosaccharyl transferase activity;0.000545457991164443!GO:0043284;biopolymer biosynthetic process;0.000558615247364528!GO:0016853;isomerase activity;0.000565092960122282!GO:0015630;microtubule cytoskeleton;0.000611444150848124!GO:0008250;oligosaccharyl transferase complex;0.000624289914460279!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000644591745413396!GO:0030132;clathrin coat of coated pit;0.000648795641408004!GO:0019899;enzyme binding;0.000691397484024179!GO:0030137;COPI-coated vesicle;0.000771876619716881!GO:0044262;cellular carbohydrate metabolic process;0.000799178270388634!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000819056578638607!GO:0007050;cell cycle arrest;0.000875795840509202!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000999976069459323!GO:0006891;intra-Golgi vesicle-mediated transport;0.00104706895227359!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00105299729065422!GO:0016779;nucleotidyltransferase activity;0.00105698913115427!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00105698913115427!GO:0051128;regulation of cellular component organization and biogenesis;0.00112515708221779!GO:0005048;signal sequence binding;0.00113196121616246!GO:0065007;biological regulation;0.00113196121616246!GO:0006414;translational elongation;0.0011617552175026!GO:0006892;post-Golgi vesicle-mediated transport;0.00116385447173898!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00120036168486705!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00128606417964149!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00128606417964149!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00128606417964149!GO:0051920;peroxiredoxin activity;0.00129717021593465!GO:0003729;mRNA binding;0.00132826788885191!GO:0006612;protein targeting to membrane;0.00143441553062571!GO:0009165;nucleotide biosynthetic process;0.00144702608284241!GO:0044427;chromosomal part;0.00168018347627378!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00182036803460254!GO:0048518;positive regulation of biological process;0.00202536668174992!GO:0045893;positive regulation of transcription, DNA-dependent;0.00203999716435002!GO:0009967;positive regulation of signal transduction;0.00205042386843638!GO:0045892;negative regulation of transcription, DNA-dependent;0.00222855247274144!GO:0005813;centrosome;0.00227364984524689!GO:0030658;transport vesicle membrane;0.00229156688927059!GO:0051325;interphase;0.00235156545879837!GO:0003690;double-stranded DNA binding;0.00236245474096026!GO:0030118;clathrin coat;0.00236976016862091!GO:0051329;interphase of mitotic cell cycle;0.00241715981609021!GO:0051168;nuclear export;0.00246783310023389!GO:0045941;positive regulation of transcription;0.00249835167537118!GO:0018196;peptidyl-asparagine modification;0.00266689619600778!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00266689619600778!GO:0006334;nucleosome assembly;0.0027002154873501!GO:0046474;glycerophospholipid biosynthetic process;0.00281316450982252!GO:0008186;RNA-dependent ATPase activity;0.0030145535495544!GO:0008154;actin polymerization and/or depolymerization;0.00317468195678628!GO:0004177;aminopeptidase activity;0.00322152486163604!GO:0022890;inorganic cation transmembrane transporter activity;0.00341968023737611!GO:0016044;membrane organization and biogenesis;0.00342053813560425!GO:0051252;regulation of RNA metabolic process;0.00344266737490858!GO:0005520;insulin-like growth factor binding;0.00349010408311171!GO:0005815;microtubule organizing center;0.00353199792613771!GO:0003779;actin binding;0.00355655120653552!GO:0048500;signal recognition particle;0.00380521212018887!GO:0006509;membrane protein ectodomain proteolysis;0.00397501279011179!GO:0033619;membrane protein proteolysis;0.00397501279011179!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00400770603581063!GO:0022403;cell cycle phase;0.00407148693274865!GO:0031072;heat shock protein binding;0.00414294204107719!GO:0031497;chromatin assembly;0.00418356716820302!GO:0051287;NAD binding;0.00432153204792348!GO:0006402;mRNA catabolic process;0.00432153204792348!GO:0015992;proton transport;0.00436116108847137!GO:0017166;vinculin binding;0.00437148991078364!GO:0048468;cell development;0.00438793519180423!GO:0006650;glycerophospholipid metabolic process;0.00452062777277462!GO:0004674;protein serine/threonine kinase activity;0.00464813768905663!GO:0006818;hydrogen transport;0.0047156681041067!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00486744230329731!GO:0006383;transcription from RNA polymerase III promoter;0.00491444907779409!GO:0003899;DNA-directed RNA polymerase activity;0.00508162202411367!GO:0016363;nuclear matrix;0.00523962600464016!GO:0051540;metal cluster binding;0.00536978196151946!GO:0051536;iron-sulfur cluster binding;0.00536978196151946!GO:0043488;regulation of mRNA stability;0.00540234100589101!GO:0043487;regulation of RNA stability;0.00540234100589101!GO:0043492;ATPase activity, coupled to movement of substances;0.00560756604553794!GO:0001726;ruffle;0.00569483241961345!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00571648088455413!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00571648088455413!GO:0005791;rough endoplasmic reticulum;0.0057409439521222!GO:0030027;lamellipodium;0.00593788244230653!GO:0030521;androgen receptor signaling pathway;0.00618066527362911!GO:0030041;actin filament polymerization;0.00627095387886734!GO:0030660;Golgi-associated vesicle membrane;0.00660602992575956!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00661944357508949!GO:0003746;translation elongation factor activity;0.00663553376304391!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00663553376304391!GO:0015002;heme-copper terminal oxidase activity;0.00663553376304391!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00663553376304391!GO:0004129;cytochrome-c oxidase activity;0.00663553376304391!GO:0007006;mitochondrial membrane organization and biogenesis;0.00666207520197666!GO:0006839;mitochondrial transport;0.00667942136480225!GO:0043681;protein import into mitochondrion;0.00683744435565253!GO:0005581;collagen;0.00685439469898573!GO:0015631;tubulin binding;0.00710102543006958!GO:0046489;phosphoinositide biosynthetic process;0.0071383280049586!GO:0006740;NADPH regeneration;0.00718803542267063!GO:0006098;pentose-phosphate shunt;0.00718803542267063!GO:0030659;cytoplasmic vesicle membrane;0.00741045064932517!GO:0003711;transcription elongation regulator activity;0.00751588012096116!GO:0004004;ATP-dependent RNA helicase activity;0.00752838599819161!GO:0030119;AP-type membrane coat adaptor complex;0.00758731810989891!GO:0030127;COPII vesicle coat;0.00760183007132498!GO:0012507;ER to Golgi transport vesicle membrane;0.00760183007132498!GO:0030134;ER to Golgi transport vesicle;0.00760387835296056!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00768720305343884!GO:0045047;protein targeting to ER;0.00768720305343884!GO:0065009;regulation of a molecular function;0.00782893489845398!GO:0006352;transcription initiation;0.0085849327412798!GO:0008022;protein C-terminus binding;0.0090587785938193!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00918938247211088!GO:0048487;beta-tubulin binding;0.00919579625930968!GO:0008047;enzyme activator activity;0.00951873665660721!GO:0000059;protein import into nucleus, docking;0.00980703908522084!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0100783948869449!GO:0008320;protein transmembrane transporter activity;0.0100783948869449!GO:0008139;nuclear localization sequence binding;0.0101145029679227!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0102085342141581!GO:0005869;dynactin complex;0.0102692888475042!GO:0030176;integral to endoplasmic reticulum membrane;0.0102866509909107!GO:0000049;tRNA binding;0.0109956316997696!GO:0030518;steroid hormone receptor signaling pathway;0.0111311570769446!GO:0035258;steroid hormone receptor binding;0.0119282623495798!GO:0043433;negative regulation of transcription factor activity;0.0121911200678343!GO:0006626;protein targeting to mitochondrion;0.0122084935377946!GO:0030125;clathrin vesicle coat;0.012297989387381!GO:0030665;clathrin coated vesicle membrane;0.012297989387381!GO:0007040;lysosome organization and biogenesis;0.0123777619533016!GO:0051101;regulation of DNA binding;0.0124276813217327!GO:0031902;late endosome membrane;0.0124396552797055!GO:0031529;ruffle organization and biogenesis;0.0127312681397633!GO:0030131;clathrin adaptor complex;0.0128172002034872!GO:0008286;insulin receptor signaling pathway;0.0128172002034872!GO:0030032;lamellipodium biogenesis;0.012893541991375!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0128979408368875!GO:0033043;regulation of organelle organization and biogenesis;0.0128979408368875!GO:0051087;chaperone binding;0.0132142596307539!GO:0007030;Golgi organization and biogenesis;0.0135014069497165!GO:0040029;regulation of gene expression, epigenetic;0.0137909566791317!GO:0051539;4 iron, 4 sulfur cluster binding;0.013857362459206!GO:0008312;7S RNA binding;0.0145520964407164!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0146591643983353!GO:0045792;negative regulation of cell size;0.0148648192680039!GO:0006979;response to oxidative stress;0.0158278751902945!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0163334288166308!GO:0030308;negative regulation of cell growth;0.0163643443256268!GO:0000082;G1/S transition of mitotic cell cycle;0.0165502018747278!GO:0030833;regulation of actin filament polymerization;0.0166164568538099!GO:0006289;nucleotide-excision repair;0.0167300277979118!GO:0031323;regulation of cellular metabolic process;0.0169236758197532!GO:0050811;GABA receptor binding;0.0170724531995525!GO:0006354;RNA elongation;0.0172092769130632!GO:0043022;ribosome binding;0.0173557337100619!GO:0005096;GTPase activator activity;0.0173901305580805!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0175193144435458!GO:0030880;RNA polymerase complex;0.0180280343610672!GO:0007160;cell-matrix adhesion;0.0182388641858693!GO:0006595;polyamine metabolic process;0.0185276709494703!GO:0031543;peptidyl-proline dioxygenase activity;0.0185945394633364!GO:0000087;M phase of mitotic cell cycle;0.0185945394633364!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0186629426156605!GO:0031589;cell-substrate adhesion;0.0187813807378165!GO:0050662;coenzyme binding;0.0188134937883178!GO:0031625;ubiquitin protein ligase binding;0.0188160496624462!GO:0006778;porphyrin metabolic process;0.0195400631132426!GO:0033013;tetrapyrrole metabolic process;0.0195400631132426!GO:0006607;NLS-bearing substrate import into nucleus;0.0200035484849336!GO:0022884;macromolecule transmembrane transporter activity;0.0203187819185775!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0203187819185775!GO:0030384;phosphoinositide metabolic process;0.0203332195312596!GO:0007067;mitosis;0.0214745901175124!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0214745901175124!GO:0007265;Ras protein signal transduction;0.0216179359930574!GO:0046483;heterocycle metabolic process;0.0221311452459454!GO:0005684;U2-dependent spliceosome;0.0221848094176755!GO:0051301;cell division;0.0231010868875606!GO:0008180;signalosome;0.0231010868875606!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0231010868875606!GO:0050681;androgen receptor binding;0.0231010868875606!GO:0044433;cytoplasmic vesicle part;0.0231010868875606!GO:0032906;transforming growth factor-beta2 production;0.0231010868875606!GO:0032909;regulation of transforming growth factor-beta2 production;0.0231010868875606!GO:0005586;collagen type III;0.0233318416123846!GO:0000902;cell morphogenesis;0.0243580167620224!GO:0032989;cellular structure morphogenesis;0.0243580167620224!GO:0042802;identical protein binding;0.024465616171231!GO:0016272;prefoldin complex;0.024465616171231!GO:0016301;kinase activity;0.0245781403181545!GO:0005100;Rho GTPase activator activity;0.0247100360569302!GO:0003684;damaged DNA binding;0.0247100360569302!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0247100360569302!GO:0035035;histone acetyltransferase binding;0.0247477285437754!GO:0051098;regulation of binding;0.0255416041953696!GO:0007033;vacuole organization and biogenesis;0.0255930933313463!GO:0006739;NADP metabolic process;0.0255930933313463!GO:0046467;membrane lipid biosynthetic process;0.0257698305534467!GO:0000339;RNA cap binding;0.0261057710470989!GO:0045334;clathrin-coated endocytic vesicle;0.0261722963848314!GO:0005637;nuclear inner membrane;0.0264457948375206!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0267837874163282!GO:0006401;RNA catabolic process;0.0268613271723055!GO:0009966;regulation of signal transduction;0.0268613271723055!GO:0008147;structural constituent of bone;0.0271153186197211!GO:0006417;regulation of translation;0.0277025737613394!GO:0005774;vacuolar membrane;0.0280935786629684!GO:0006497;protein amino acid lipidation;0.028240060083778!GO:0005862;muscle thin filament tropomyosin;0.0288108727607175!GO:0030128;clathrin coat of endocytic vesicle;0.0291618326867613!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0291618326867613!GO:0030122;AP-2 adaptor complex;0.0291618326867613!GO:0050178;phenylpyruvate tautomerase activity;0.0293101898620185!GO:0030031;cell projection biogenesis;0.0297998177249491!GO:0045045;secretory pathway;0.0300059368051645!GO:0000209;protein polyubiquitination;0.0302105345506876!GO:0007242;intracellular signaling cascade;0.0302105345506876!GO:0008234;cysteine-type peptidase activity;0.0304556842598361!GO:0006350;transcription;0.0305031099016256!GO:0005801;cis-Golgi network;0.0305031099016256!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0305730400167246!GO:0000428;DNA-directed RNA polymerase complex;0.0305730400167246!GO:0031901;early endosome membrane;0.031248236313728!GO:0045936;negative regulation of phosphate metabolic process;0.0315950453201427!GO:0008632;apoptotic program;0.0325685549698489!GO:0005832;chaperonin-containing T-complex;0.0330230686529976!GO:0007569;cell aging;0.0337290572315131!GO:0031272;regulation of pseudopodium formation;0.0343468803322385!GO:0031269;pseudopodium formation;0.0343468803322385!GO:0031344;regulation of cell projection organization and biogenesis;0.0343468803322385!GO:0031268;pseudopodium organization and biogenesis;0.0343468803322385!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0343468803322385!GO:0031274;positive regulation of pseudopodium formation;0.0343468803322385!GO:0016126;sterol biosynthetic process;0.035749377556875!GO:0031418;L-ascorbic acid binding;0.0360006710037323!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0360716411804761!GO:0010257;NADH dehydrogenase complex assembly;0.0360716411804761!GO:0033108;mitochondrial respiratory chain complex assembly;0.0360716411804761!GO:0019752;carboxylic acid metabolic process;0.0361313249672879!GO:0006082;organic acid metabolic process;0.0366414163640997!GO:0042168;heme metabolic process;0.0369051578114109!GO:0006984;ER-nuclear signaling pathway;0.0373229198501446!GO:0000287;magnesium ion binding;0.0378508234863267!GO:0030522;intracellular receptor-mediated signaling pathway;0.0381155513570822!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0381921809571859!GO:0016791;phosphoric monoester hydrolase activity;0.0382982237405705!GO:0045926;negative regulation of growth;0.0387013699056155!GO:0033559;unsaturated fatty acid metabolic process;0.0387692727589822!GO:0006636;unsaturated fatty acid biosynthetic process;0.0387692727589822!GO:0033673;negative regulation of kinase activity;0.0387841977813788!GO:0006469;negative regulation of protein kinase activity;0.0387841977813788!GO:0019798;procollagen-proline dioxygenase activity;0.0398276982378793!GO:0031371;ubiquitin conjugating enzyme complex;0.0398276982378793!GO:0044452;nucleolar part;0.0399324296625083!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0401088557083609!GO:0016251;general RNA polymerase II transcription factor activity;0.0403458669578952!GO:0030503;regulation of cell redox homeostasis;0.0405023057949242!GO:0030508;thiol-disulfide exchange intermediate activity;0.0421081619817967!GO:0030836;positive regulation of actin filament depolymerization;0.0426254798687796!GO:0030911;TPR domain binding;0.0427107029738327!GO:0012506;vesicle membrane;0.0427107029738327!GO:0007021;tubulin folding;0.0432726802189161!GO:0007034;vacuolar transport;0.043728944073801!GO:0022415;viral reproductive process;0.044434749782935!GO:0006779;porphyrin biosynthetic process;0.0444499127704797!GO:0033014;tetrapyrrole biosynthetic process;0.0444499127704797!GO:0006118;electron transport;0.0446643603957322!GO:0008033;tRNA processing;0.0450487553332335!GO:0016408;C-acyltransferase activity;0.0457436898698046!GO:0000096;sulfur amino acid metabolic process;0.0457436898698046!GO:0045639;positive regulation of myeloid cell differentiation;0.0460270255008735!GO:0006376;mRNA splice site selection;0.0460270255008735!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0460270255008735!GO:0009081;branched chain family amino acid metabolic process;0.0460623256260223!GO:0031124;mRNA 3'-end processing;0.0462322438206012!GO:0001725;stress fiber;0.0463634536918459!GO:0032432;actin filament bundle;0.0463634536918459!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0463647766605442!GO:0006302;double-strand break repair;0.0467906899618367!GO:0006144;purine base metabolic process;0.0472782334702629!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0472782334702629!GO:0004784;superoxide dismutase activity;0.0472782334702629!GO:0048144;fibroblast proliferation;0.0472975052035847!GO:0048145;regulation of fibroblast proliferation;0.0472975052035847!GO:0005583;fibrillar collagen;0.0475178688613125!GO:0010468;regulation of gene expression;0.0481732979857027!GO:0006611;protein export from nucleus;0.0482199794020857!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0485075783190192!GO:0051059;NF-kappaB binding;0.0487740319259881!GO:0051348;negative regulation of transferase activity;0.0488593109209919!GO:0046914;transition metal ion binding;0.0491032185684119!GO:0048146;positive regulation of fibroblast proliferation;0.0498175873002974 | |||
|sample_id=11933 | |||
|sample_note= | |||
|sample_sex=male | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue=ANATOMICAL SYSTEM | |||
|top_motifs=EVI1:2.99447364017;HMGA1,2:2.9497294799;FOXL1:2.70642503391;NKX2-2,8:2.68910525374;TAL1_TCF{3,4,12}:2.68647589753;AIRE:2.42880385182;UFEwm:2.34631461817;GLI1..3:2.27105661351;HES1:2.11717327854;ALX4:2.08375875033;HIF1A:2.04312576256;PRDM1:1.97930405464;NR3C1:1.89637813529;GATA4:1.77307349289;KLF4:1.72554132311;ZNF384:1.63158195087;TOPORS:1.5924009644;NR6A1:1.58392421623;MYBL2:1.5801815694;FOXD3:1.57777671564;NKX3-1:1.52583771925;ESR1:1.41058283541;SRF:1.39341139708;TEAD1:1.34145873711;ZIC1..3:1.32462135137;RXRA_VDR{dimer}:1.2544980363;LHX3,4:1.24997943665;NFE2L1:1.23735630899;ZBTB16:1.22748715816;NKX6-1,2:1.08972340215;RXR{A,B,G}:1.08006517242;TEF:1.06815085089;BPTF:0.927067599635;PAX4:0.906765071148;TFAP2{A,C}:0.903735905449;HOX{A4,D4}:0.869495213555;FOXP1:0.862892704888;TFCP2:0.857102163385;EBF1:0.823879931693;TFAP2B:0.788639522009;ZBTB6:0.756493821252;ZNF423:0.731672663007;PATZ1:0.695377671183;XCPE1{core}:0.692155867287;GZF1:0.690619544878;GTF2I:0.688991391416;TLX1..3_NFIC{dimer}:0.688829606857;ADNP_IRX_SIX_ZHX:0.68498435734;NANOG{mouse}:0.667815839974;ATF6:0.66371869537;PITX1..3:0.657600493614;NFATC1..3:0.617619813063;MAZ:0.600756150023;CDX1,2,4:0.591074696713;NKX3-2:0.573037646701;PPARG:0.527283224288;IRF1,2:0.50198613078;SOX5:0.500531020861;TP53:0.492158644975;MTE{core}:0.491970820341;TFAP4:0.437177133993;EN1,2:0.436711096352;FOX{I1,J2}:0.434882932929;HSF1,2:0.424906146809;HAND1,2:0.3938758029;HOX{A5,B5}:0.390674769662;XBP1:0.390662082175;FOXO1,3,4:0.373192223193;IKZF1:0.36186868605;HIC1:0.358076744923;RREB1:0.342592834506;TBX4,5:0.328913067958;IKZF2:0.290392680008;MAFB:0.255673207753;SPZ1:0.249934653002;HMX1:0.248296657015;NKX2-1,4:0.24566349374;GTF2A1,2:0.2424785167;SMAD1..7,9:0.206190399512;STAT2,4,6:0.198444201586;PAX5:0.181821044335;FOXA2:0.180524457779;SOX17:0.176921428567;POU6F1:0.170810825931;ZFP161:0.168501030988;MZF1:0.142297733467;AHR_ARNT_ARNT2:0.116223298243;HLF:0.107801483286;POU5F1:0.0838157880359;ZNF238:0.0505115715233;MTF1:0.0290902946254;NR1H4:0.0199966162959;SP1:0.0121395809372;DMAP1_NCOR{1,2}_SMARC:0.0118847133475;FOX{D1,D2}:-0.0118928519913;NFE2L2:-0.0441111151408;ONECUT1,2:-0.0623741876378;MEF2{A,B,C,D}:-0.063648540852;DBP:-0.0696389227376;GFI1B:-0.0975947444331;MED-1{core}:-0.131485272358;EGR1..3:-0.143280146465;MYFfamily:-0.148283510543;CDC5L:-0.189088668345;FOXP3:-0.200560271628;VSX1,2:-0.234026683359;TBP:-0.238743239147;NFE2:-0.250962976424;REST:-0.255416924525;RBPJ:-0.257871690495;BACH2:-0.265149052515;ZNF148:-0.283101211109;POU1F1:-0.290488446428;NHLH1,2:-0.294435393936;PAX3,7:-0.325336043176;PAX1,9:-0.327124532518;NFKB1_REL_RELA:-0.333915260616;FOSL2:-0.337824328755;NFIX:-0.350529661644;GCM1,2:-0.355424286484;HNF1A:-0.360958909511;FOS_FOS{B,L1}_JUN{B,D}:-0.36136522467;NR5A1,2:-0.376535531438;FOXM1:-0.390789855265;SOX2:-0.401126094791;HOX{A6,A7,B6,B7}:-0.404083932226;CEBPA,B_DDIT3:-0.429737789429;STAT5{A,B}:-0.435693713351;SREBF1,2:-0.439848886116;SNAI1..3:-0.44836748795;PAX8:-0.452005382423;TFDP1:-0.463316593013;RFX1:-0.478989604731;NFIL3:-0.486366057654;ARID5B:-0.4971957638;IRF7:-0.498654890484;ZNF143:-0.510349559756;HNF4A_NR2F1,2:-0.515186859822;YY1:-0.520373963322;TLX2:-0.525045596595;ELK1,4_GABP{A,B1}:-0.526164414987;bHLH_family:-0.579044239214;AR:-0.585949375328;ATF2:-0.58768792695;BREu{core}:-0.626257158001;NRF1:-0.633508255852;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.636689130084;MYB:-0.637852669572;PDX1:-0.654702155777;ETS1,2:-0.671521657804;LMO2:-0.672529853204;PAX6:-0.677422302899;NKX2-3_NKX2-5:-0.677438829134;RUNX1..3:-0.691544307796;FOXN1:-0.693136954512;CUX2:-0.702723898242;SPI1:-0.706936146245;SPIB:-0.711999039852;PAX2:-0.728740013783;E2F1..5:-0.755244096979;FOXQ1:-0.765768270842;CREB1:-0.773559598329;ATF5_CREB3:-0.779269206187;POU3F1..4:-0.799826040292;STAT1,3:-0.822721076994;ATF4:-0.846184032567;OCT4_SOX2{dimer}:-0.873137185304;LEF1_TCF7_TCF7L1,2:-0.92955850177;PRRX1,2:-0.945763051388;ELF1,2,4:-0.94716999841;T:-0.951373242963;POU2F1..3:-1.00610641729;GFI1:-1.00888108549;EP300:-1.04901555821;RFX2..5_RFXANK_RFXAP:-1.0632801014;ZEB1:-1.0687729358;JUN:-1.10458701291;CRX:-1.16293761891;HBP1_HMGB_SSRP1_UBTF:-1.16561344843;NANOG:-1.30670866894;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.31788609579;ALX1:-1.32848877224;FOX{F1,F2,J1}:-1.34849546677;RORA:-1.35750302627;SOX{8,9,10}:-1.40756784963;TGIF1:-1.41436624496;NFY{A,B,C}:-1.4412677127;GATA6:-1.47138814291;ESRRA:-1.50073359473;MYOD1:-1.68823503901;HOXA9_MEIS1:-1.80907846226;PBX1:-2.06053271599 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11933-125I7;search_select_hide=table117:FF:11933-125I7 | |||
}} | }} |
Latest revision as of 18:30, 4 June 2020
Name: | Olfactory epithelial cells, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13816 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13816
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13816
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.908 |
10 | 10 | 0.571 |
100 | 100 | 0.485 |
101 | 101 | 0.803 |
102 | 102 | 0.209 |
103 | 103 | 0.744 |
104 | 104 | 0.749 |
105 | 105 | 0.178 |
106 | 106 | 0.0104 |
107 | 107 | 0.0124 |
108 | 108 | 0.18 |
109 | 109 | 0.771 |
11 | 11 | 0.456 |
110 | 110 | 0.54 |
111 | 111 | 0.904 |
112 | 112 | 0.404 |
113 | 113 | 0.634 |
114 | 114 | 0.252 |
115 | 115 | 0.139 |
116 | 116 | 0.0237 |
117 | 117 | 0.556 |
118 | 118 | 0.998 |
119 | 119 | 0.15 |
12 | 12 | 0.158 |
120 | 120 | 0.301 |
121 | 121 | 0.554 |
122 | 122 | 0.0758 |
123 | 123 | 0.571 |
124 | 124 | 0.244 |
125 | 125 | 0.457 |
126 | 126 | 0.433 |
127 | 127 | 0.686 |
128 | 128 | 0.0654 |
129 | 129 | 0.53 |
13 | 13 | 0.962 |
130 | 130 | 0.252 |
131 | 131 | 0.421 |
132 | 132 | 0.0748 |
133 | 133 | 0.972 |
134 | 134 | 0.861 |
135 | 135 | 0.832 |
136 | 136 | 0.951 |
137 | 137 | 0.075 |
138 | 138 | 0.597 |
139 | 139 | 0.459 |
14 | 14 | 0.519 |
140 | 140 | 0.756 |
141 | 141 | 0.175 |
142 | 142 | 0.183 |
143 | 143 | 0.646 |
144 | 144 | 0.519 |
145 | 145 | 0.317 |
146 | 146 | 0.146 |
147 | 147 | 0.275 |
148 | 148 | 0.753 |
149 | 149 | 0.0561 |
15 | 15 | 0.334 |
150 | 150 | 0.168 |
151 | 151 | 0.979 |
152 | 152 | 0.0464 |
153 | 153 | 0.522 |
154 | 154 | 0.917 |
155 | 155 | 0.484 |
156 | 156 | 0.477 |
157 | 157 | 0.391 |
158 | 158 | 0.187 |
159 | 159 | 0.773 |
16 | 16 | 0.0364 |
160 | 160 | 0.334 |
161 | 161 | 0.939 |
162 | 162 | 0.834 |
163 | 163 | 0.747 |
164 | 164 | 0.00897 |
165 | 165 | 0.462 |
166 | 166 | 0.0255 |
167 | 167 | 0.717 |
168 | 168 | 0.571 |
169 | 169 | 0.024 |
17 | 17 | 0.423 |
18 | 18 | 0.426 |
19 | 19 | 0.00304 |
2 | 2 | 0.244 |
20 | 20 | 0.967 |
21 | 21 | 0.0572 |
22 | 22 | 0.541 |
23 | 23 | 0.338 |
24 | 24 | 0.124 |
25 | 25 | 0.269 |
26 | 26 | 0.139 |
27 | 27 | 0.981 |
28 | 28 | 0.55 |
29 | 29 | 0.575 |
3 | 3 | 0.296 |
30 | 30 | 0.537 |
31 | 31 | 0.461 |
32 | 32 | 7.4432e-23 |
33 | 33 | 0.568 |
34 | 34 | 0.878 |
35 | 35 | 0.775 |
36 | 36 | 0.135 |
37 | 37 | 0.145 |
38 | 38 | 0.508 |
39 | 39 | 0.346 |
4 | 4 | 0.312 |
40 | 40 | 0.466 |
41 | 41 | 0.324 |
42 | 42 | 0.703 |
43 | 43 | 0.729 |
44 | 44 | 0.264 |
45 | 45 | 0.811 |
46 | 46 | 0.279 |
47 | 47 | 0.924 |
48 | 48 | 0.588 |
49 | 49 | 0.8 |
5 | 5 | 0.821 |
50 | 50 | 0.497 |
51 | 51 | 0.701 |
52 | 52 | 0.666 |
53 | 53 | 0.656 |
54 | 54 | 0.365 |
55 | 55 | 0.0797 |
56 | 56 | 0.79 |
57 | 57 | 0.544 |
58 | 58 | 0.603 |
59 | 59 | 0.289 |
6 | 6 | 0.408 |
60 | 60 | 0.7 |
61 | 61 | 0.963 |
62 | 62 | 0.588 |
63 | 63 | 0.167 |
64 | 64 | 0.845 |
65 | 65 | 0.333 |
66 | 66 | 0.0244 |
67 | 67 | 0.589 |
68 | 68 | 0.362 |
69 | 69 | 0.26 |
7 | 7 | 0.302 |
70 | 70 | 0.0676 |
71 | 71 | 0.363 |
72 | 72 | 0.26 |
73 | 73 | 0.0507 |
74 | 74 | 0.592 |
75 | 75 | 0.641 |
76 | 76 | 0.364 |
77 | 77 | 0.115 |
78 | 78 | 0.957 |
79 | 79 | 3.48209e-5 |
8 | 8 | 0.188 |
80 | 80 | 0.0457 |
81 | 81 | 0.899 |
82 | 82 | 0.0156 |
83 | 83 | 0.515 |
84 | 84 | 0.627 |
85 | 85 | 0.0278 |
86 | 86 | 0.77 |
87 | 87 | 0.638 |
88 | 88 | 0.109 |
89 | 89 | 0.315 |
9 | 9 | 0.681 |
90 | 90 | 0.852 |
91 | 91 | 0.565 |
92 | 92 | 0.132 |
93 | 93 | 0.856 |
94 | 94 | 0.328 |
95 | 95 | 0.97 |
96 | 96 | 0.744 |
97 | 97 | 0.832 |
98 | 98 | 0.392 |
99 | 99 | 0.0125 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13816
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
FF:0000002 in vivo cell sample
FF:0000210 human sample
FF:0200002 olfactory epithelial cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000197 (receptor cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000098 (sensory epithelial cell)
0002167 (olfactory epithelial cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0200002 (olfactory epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)