FF:12174-128I5: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005718 | ||
| | |accession_numbers=CAGE;DRX008054;DRR008926;DRZ000351;DRZ001736;DRZ011701;DRZ013086 | ||
| | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000236 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000025 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.57!368.36!IRF8;;chr19:50922187..50922204,+!p1@SPIB!2.46!285.88!SPIB;;chr2:100759010..100759035,-!p1@AFF3!2.44!276.67!AFF3;;chr11:111249993..111250006,-!p1@POU2AF1!2.31!203.80!POU2AF1;;chr2:231090433..231090469,+!p1@SP140!2.08!118.12!SP140;;chr2:100759037..100759058,-!p2@AFF3!2.07!117.32!AFF3;;chr11:47400078..47400106,-!p1@SPI1!2.05!111.31!SPI1;;chr6:391743..391759,+!p1@IRF4!2.03!105.70!IRF4;;chr2:231090471..231090504,+!p2@SP140!1.99!97.70!SP140;;chr6:91006518..91006570,-!p1@BACH2!1.98!209.41!BACH2;;chr17:38020392..38020477,-!p1@IKZF3!1.95!87.69!IKZF3;;chr5:88178983..88179012,-!p1@MEF2C!1.81!468.46!MEF2C;;chr2:68592406..68592424,+!p1@PLEK!1.80!61.66!PLEK;;chr2:100758991..100759009,-!p3@AFF3!1.79!60.46!AFF3;;chr3:71355163..71355209,-!p5@FOXP1!1.76!77.68!FOXP1;;chr6:91006575..91006602,-!p2@BACH2!1.67!67.27!BACH2;;chr3:32023232..32023273,+!p1@ZNF860!1.60!55.25!ZNF860;;chr17:38020557..38020572,-!p4@IKZF3!1.59!37.64!IKZF3;;chr7:50344251..50344288,+!p3@IKZF1!1.57!36.44!IKZF1;;chr19:16435625..16435682,+!p1@KLF2!1.56!1083.87!KLF2;;chr8:86099884..86099918,+!p4@E2F5!1.56!35.23!E2F5;;chr2:60781201..60781258,-!p3@BCL11A!1.55!34.43!BCL11A;;chr2:60780607..60780624,-!p2@BCL11A!1.54!99.70!BCL11A;;chr7:50343634..50343717,+!p2@IKZF1!1.54!33.63!IKZF1;;chr19:13213662..13213686,-!p1@LYL1!1.53!48.45!LYL1;;chr20:56195474..56195506,-!p1@ZBP1!1.53!33.23!ZBP1;;chr8:86089627..86089653,+!p3@E2F5!1.45!30.83!E2F5;;chr7:50344289..50344323,+!p1@IKZF1!1.43!26.03!IKZF1;;chr2:68592394..68592405,+!p2@PLEK!1.43!26.03!PLEK;;chrY:21906594..21906622,-!p1@KDM5D!1.42!25.22!KDM5D;;chr17:38020516..38020544,-!p5@IKZF3!1.41!24.42!IKZF3;;chr13:41593425..41593480,-!p1@ELF1!1.39!146.54!ELF1;;chr2:60778035..60778060,-!p4@BCL11A!1.38!27.63!BCL11A;;chr17:37934204..37934241,-!p3@IKZF3!1.38!23.22!IKZF3;;chr5:158526756..158526797,-!p3@EBF1!1.38!23.22!EBF1;;chr7:64838786..64838809,+!p2@ZNF92!1.36!120.12!ZNF92;;chr7:50348268..50348366,+!p4@IKZF1!1.35!21.22!IKZF1;;chr3:71409904..71409927,-!p46@FOXP1!1.33!20.42!FOXP1;;chr5:88179017..88179046,-!p2@MEF2C!1.32!78.48!MEF2C;;chr9:37034186..37034216,-!p2@PAX5!1.31!19.62!PAX5;;chr14:69262947..69262986,-!p3@ZFP36L1!1.29!22.42!ZFP36L1;;chr18:52989031..52989079,-!p2@TCF4!1.25!38.84!TCF4;;chr4:185395633..185395651,-!p2@IRF2!1.25!26.83!IRF2;;chr2:231090344..231090361,-!p3@SP110!1.25!16.82!SP110;;chr16:85936412..85936431,+!p2@IRF8!1.25!16.82!IRF8;;chr10:94449703..94449718,+!p1@HHEX!1.24!62.06!HHEX;;chr10:94449675..94449694,+!p2@HHEX!1.24!43.24!HHEX;;chr8:86089531..86089544,+!p7@E2F5!1.23!16.02!E2F5;;chr1:25256756..25256774,-!p1@RUNX3!1.22!28.83!RUNX3;;chr19:13213704..13213726,-!p3@LYL1!1.22!20.42!LYL1;;chr3:71631151..71631194,-!p15@FOXP1!1.22!17.62!FOXP1;;chr11:128563948..128564003,+!p1@FLI1!1.21!178.18!FLI1;;chr1:151319654..151319698,-!p2@RFX5!1.21!33.23!RFX5;;chr4:185395590..185395627,-!p3@IRF2!1.20!18.42!IRF2;;chr19:42636586..42636607,-!p1@POU2F2!1.19!39.64!POU2F2;;chr20:50159198..50159299,-!p1@NFATC2!1.18!20.42!NFATC2;;chr3:18486354..18486377,-!p2@SATB1!1.16!16.82!SATB1;;chr5:88120151..88120177,-!p6@MEF2C!1.16!13.61!MEF2C;;chr14:75988771..75988826,+!p1@BATF!1.15!17.62!BATF;;chr9:117150254..117150271,-!p1@AKNA!1.14!34.83!AKNA;;chr19:36391434..36391450,-!p1@NFKBID!1.13!24.82!NFKBID;;chr6:91006503..91006517,-!p3@BACH2!1.11!12.01!BACH2;;chr19:45579725..45579743,-!p1@ZNF296!1.10!52.05!ZNF296;;chr2:100759060..100759073,-!p8@AFF3!1.10!11.61!AFF3;;chr17:38020481..38020506,-!p7@IKZF3!1.10!11.61!IKZF3;;chr19:36204309..36204335,+!p1@ZBTB32!1.10!11.61!ZBTB32;;chr4:57522513..57522548,-!p4@HOPX!1.09!11.21!HOPX;;chr11:47400062..47400077,-!p2@SPI1!1.09!11.21!SPI1;;chrX:106960221..106960236,-!p3@TSC22D3!1.06!29.23!TSC22D3;;chr9:37027156..37027193,-!p4@PAX5!1.06!10.41!PAX5;;chr7:77469439..77469459,+!p6@PHTF2!1.06!10.41!PHTF2;;chr3:18487057..18487105,-!p4@SATB1!1.06!10.41!SATB1;;chr2:61108695..61108753,+!p1@REL!1.05!70.87!REL;;chr19:20748574..20748599,-!p1@ZNF737!1.04!60.06!ZNF737;;chr6:157098579..157098634,+!p4@ARID1B!1.03!22.02!ARID1B;;chr5:158526709..158526741,-!p7@EBF1!1.03!9.61!EBF1;;chr19:19779619..19779670,+!p1@ZNF101!1.02!27.23!ZNF101;;chr17:38020607..38020621,-!p9@IKZF3!1.01!9.21!IKZF3;;chr2:100759076..100759088,-!p10@AFF3!1.01!9.21!AFF3;;chr7:77428066..77428132,+!p2@PHTF2!1.00!59.26!PHTF2;;chr17:45810594..45810608,+!p1@TBX21!0.99!8.81!TBX21;;chrY:21906761..21906810,-!p2@KDM5D!0.99!8.81!KDM5D;;chrX:106960285..106960299,-!p1@TSC22D3!0.97!228.23!TSC22D3;;chrX:106960180..106960197,-!p2@TSC22D3!0.96!32.03!TSC22D3;;chr2:61108650..61108687,+!p2@REL!0.95!40.04!REL;;chr19:11959532..11959593,+!p1@ZNF439!0.95!31.63!ZNF439;;chr1:41174988..41175047,+!p4@NFYC!0.95!21.62!NFYC;;chr6:144385698..144385742,-!p2@PLAGL1!0.95!9.61!PLAGL1;;chr6:41701898..41701939,-!p5@TFEB!0.95!8.01!TFEB;;chr2:145277640..145277771,-!p1@ZEB2!0.94!106.51!ZEB2;;chr21:36421535..36421610,-!p2@RUNX1!0.94!28.43!RUNX1;;chr19:58220517..58220583,-!p1@ZNF154!0.94!25.22!ZNF154;;chr1:158979686..158979745,+!p1@IFI16!0.93!254.25!IFI16;;chr11:128392273..128392308,-!p2@ETS1!0.93!32.83!ETS1;;chr1:10754477..10754517,-!p1@CASZ1!0.93!12.81!CASZ1;;chr19:13213954..13214021,-!p4@LYL1!0.93!7.61!LYL1;;chrX:101186981..101187030,-!p1@ZMAT1!0.92!24.82!ZMAT1;;chrX:56258844..56258882,+!p1@KLF8!0.92!10.41!KLF8;;chr2:231084659..231084721,-!p1@SP110!0.91!175.37!SP110;;chr10:104154246..104154347,+!p3@NFKB2!0.91!46.05!NFKB2;;chr2:60780753..60780800,-!p1@BCL11A!0.90!35.64!BCL11A;;chr3:129158768..129158819,-!p1@MBD4!0.89!107.71!MBD4;;chr2:231191875..231191918,+!p1@SP140L!0.89!68.87!SP140L;;chr18:52989001..52989030,-!p10@TCF4!0.89!7.61!TCF4;;chr17:37934188..37934202,-!p8@IKZF3!0.89!6.81!IKZF3;;chr20:56195525..56195556,-!p2@ZBP1!0.89!6.81!ZBP1;;chr7:50343895..50343936,+!p5@IKZF1!0.89!6.81!IKZF1;;chr5:88179195..88179224,-!p3@MEF2C!0.87!10.41!MEF2C;;chrX:56258811..56258838,+!p2@KLF8!0.87!8.81!KLF8;;chr19:22193731..22193751,-!p1@ZNF208!0.87!6.41!ZNF208;;chr14:69262916..69262929,-!p11@ZFP36L1!0.87!6.41!ZFP36L1;;chr11:128392085..128392232,-!p1@ETS1!0.86!225.42!ETS1;;chr1:14026671..14026705,+!p2@PRDM2!0.86!40.04!PRDM2;;chr3:71179699..71179744,-!p2@FOXP1!0.85!48.85!FOXP1;;chr20:46130672..46130686,+!p2@NCOA3!0.85!28.83!NCOA3;;chr10:94451574..94451587,+!p6@HHEX!0.85!6.01!HHEX;;chr16:68119324..68119364,+!p1@NFATC3!0.84!28.03!NFATC3;;chrX:131623044..131623089,-!p1@MBNL3!0.84!26.03!MBNL3;;chr7:21467674..21467727,+!p1@SP4!0.84!25.22!SP4;;chr16:3313791..3313834,+!p2@ZNF263!0.84!13.61!ZNF263;;chrX:131622958..131622978,-!p3@MBNL3!0.84!7.61!MBNL3;;chr2:208031542..208031595,-!p2@KLF7!0.83!43.24!KLF7;;chr19:58238958..58239000,-!p1@ZNF671!0.82!24.42!ZNF671;;chrX:106960249..106960260,-!p5@TSC22D3!0.82!9.21!TSC22D3;;chr19:57183114..57183145,-!p1@ZNF835!0.82!6.41!ZNF835;;chr3:71631217..71631234,-!p33@FOXP1!0.82!5.61!FOXP1;;chr17:56565257..56565283,-!p2@HSF5!0.82!5.61!HSF5;;chrX:131624056..131624069,-!p2@MBNL3!0.81!7.61!MBNL3;;chr16:88752889..88752921,-!p1@SNAI3!0.81!6.41!SNAI3;;chr13:41240737..41240787,-!p1@FOXO1!0.79!66.47!FOXO1;;chr6:41703296..41703367,-!p1@TFEB!0.79!28.43!TFEB;;chr5:43065197..43065244,+!p5@ZNF131!0.79!10.41!ZNF131;;chr2:231280954..231280965,+!p2@SP100!0.79!10.01!SP100;;chr6:41701581..41701613,-!p2@TFEB!0.79!5.21!TFEB;;chr1:167298300..167298319,+!p2@POU2F1!0.79!5.21!POU2F1;;chr9:37034258..37034270,-!p3@PAX5!0.79!5.21!PAX5;;chr17:4981745..4981810,+!p1@ZFP3!0.78!26.83!ZFP3;;chrX:101187036..101187056,-!p2@ZMAT1!0.78!5.61!ZMAT1;;chr19:49140609..49140643,-!p1@DBP!0.77!30.03!DBP;;chr3:114866084..114866118,-!p2@ZBTB20!0.77!19.22!ZBTB20;;chr19:23941680..23941704,-!p1@ZNF681!0.77!15.22!ZNF681;;chr2:178128250..178128293,-!p6@NFE2L2!0.77!13.21!NFE2L2;;chr11:128392309..128392350,-!p3@ETS1!0.77!12.41!ETS1;;chr2:231280908..231280945,+!p1@SP100!0.76!202.20!SP100;;chr7:64838754..64838778,+!p1@ZNF92!0.76!49.65!ZNF92;;chr9:117160738..117160782,-!p2@AKNA!0.76!21.22!AKNA;;chr9:3525727..3525828,-!p2@RFX3!0.76!13.21!RFX3;;chr1:91487836..91487854,-!p3@ZNF644!0.76!11.61!ZNF644;;chr5:88179518..88179569,-!p5@MEF2C!0.76!6.41!MEF2C;;chr8:86089498..86089519,+!p6@E2F5!0.76!4.80!E2F5;;chrX:56258900..56258917,+!p4@KLF8!0.76!4.80!KLF8;;chr14:69263043..69263069,-!p8@ZFP36L1!0.76!4.80!ZFP36L1;;chr2:60778062..60778075,-!p6@BCL11A!0.76!4.80!BCL11A;;chr1:14057463..14057496,+!p4@PRDM2!0.76!4.80!PRDM2;;chr2:208394817..208394834,+!p3@CREB1!0.75!20.42!CREB1;;chr19:53696587..53696633,-!p1@ZNF665!0.75!18.82!ZNF665;;chr7:128577972..128578047,+!p1@IRF5!0.75!7.61!IRF5;;chr19:19932513..19932569,-!p1@ZNF506!0.74!94.89!ZNF506;;chr1:249132410..249132456,+!p1@ZNF672!0.74!37.24!ZNF672;;chr14:64970670..64970712,-!p3@ZBTB25!0.74!10.41!ZBTB25;;chr5:172483347..172483407,+!p1@C5orf41!0.73!36.84!CREBRF;;chr19:11877838..11877915,+!p1@ZNF441!0.73!14.81!ZNF441;;chr10:94449649..94449664,+!p3@HHEX!0.73!6.81!HHEX;;chr4:81104895..81104920,+!p2@PRDM8!0.73!6.81!PRDM8;;chr8:81397846..81397860,+!p3@ZBTB10!0.73!5.61!ZBTB10;;chr7:108209925..108209941,-!p2@THAP5!0.73!4.40!THAP5;;chr7:50344144..50344157,+!p6@IKZF1!0.73!4.40!IKZF1;;chr19:21579908..21579949,+!p1@ZNF493!0.72!28.83!ZNF493;;chr19:53073532..53073551,+!p1@ZNF701!0.72!21.22!ZNF701;;chr19:58694742..58694800,+!p2@ZNF274!0.72!19.22!ZNF274;;chr8:123793860..123793921,+!p2@ZHX2!0.72!12.81!ZHX2;;chr18:52989081..52989117,-!p7@TCF4!0.72!6.81!TCF4;;chrX:131623982..131624011,-!p6@MBNL3!0.72!6.41!MBNL3;;chr1:158979680..158979683,+!p9@IFI16!0.72!6.01!IFI16;;chr18:77160282..77160343,+!p2@NFATC1!0.71!28.83!NFATC1;;chr19:58144529..58144579,+!p1@ZNF211!0.71!24.82!ZNF211;;chr6:143266297..143266356,-!p1@HIVEP2!0.71!22.42!HIVEP2;;chr14:64971288..64971316,-!p2@ZBTB25!0.71!14.01!ZBTB25;;chr3:71630690..71630750,-!p11@FOXP1!0.71!7.21!FOXP1;;chr11:16759983..16760029,-!p2@SOX6!0.71!6.81!SOX6;;chr15:57025759..57025811,-!p2@ZNF280D!0.70!23.22!ZNF280D;;chr19:38085768..38085821,+!p1@ZNF540!0.70!6.41!ZNF540;;chr18:6414884..6414942,-!p1@L3MBTL4!0.70!5.21!L3MBTL4;;chr18:42260920..42260951,+!p4@SETBP1!0.70!4.00!SETBP1;;chr13:41593493..41593506,-!p8@ELF1!0.70!4.00!ELF1;;chr1:25256439..25256476,-!p3@RU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M2A!0.58!25.63!KDM2A;;chr19:44507091..44507163,+!p1@ZNF230!0.58!14.81!ZNF230;;chr7:99156212..99156244,+!p3@ZNF655!0.58!12.81!ZNF655;;chr2:148778973..148779035,+!p3@MBD5!0.58!8.41!MBD5;;chr19:47616992..47617011,-!p4@ZC3H4!0.58!6.81!ZC3H4;;chr19:36980455..36980469,-!p2@ZNF566!0.58!6.81!ZNF566;;chr8:125985531..125985571,+!p1@ZNF572!0.58!6.41!ZNF572;;chr4:146859626..146859669,-!p2@ZNF827!0.58!4.40!ZNF827;;chr8:128747661..128747703,+!p6@MYC!0.58!4.00!MYC;;chr1:151319318..151319338,-!p3@RFX5!0.58!3.60!RFX5;;chr6:41700616..41700664,-!p8@TFEB!0.58!2.80!TFEB;;chr7:97840743..97840786,+!p1@BHLHA15!0.58!2.80!BHLHA15;;chr3:114173720..114173794,-!p6@ZBTB20!0.58!2.80!ZBTB20;;chr3:141105235..141105307,+!p7@ZBTB38!0.58!2.80!ZBTB38;;chr18:42260861..42260882,+!p5@SETBP1!0.58!2.80!SETBP1;;chr7:28220354..28220441,-!p1@JAZF1!0.57!52.85!JAZF1;;chr19:19843900..19843928,-!p1@ZNF14!0.57!16.42!ZNF14;;chr6:28092375..28092412,+!p1@ZSCAN16!0.57!13.61!ZSCAN16;;chr19:37709076..37709154,+!p1@ZNF383!0.57!10.81!ZNF383;;chr19:37341752..37341816,+!p1@ZNF345!0.57!9.61!ZNF345;;chr17:41322332..41322351,-!p4@BRCA1!0.57!7.61!BRCA1;;chr10:43932296..43932360,+!p1@ZNF487P!0.57!6.41!ZNF487P;;chr13:115079801..115079832,+!p2@CHAMP1!0.57!5.21!CHAMP1;;chr19:12444491..12444517,-!p4@ZNF563!0.57!4.00!ZNF563;;chr12:54785054..54785072,-!p4@ZNF385A!0.57!3.20!ZNF385A;;chr16:1464688..1464728,-!p1@UNKL!0.56!22.42!UNKL;;chr10:104155480..104155534,+!p2@NFKB2!0.56!20.82!NFKB2;;chr19:58400372..58400411,-!p1@ZNF814!0.56!16.82!ZNF814;;chr17:42298615..42298692,-!p2@UBTF!0.56!16.42!UBTF;;chr19:58459047..58459083,-!p1@ZNF256!0.56!15.62!ZNF256;;chr13:74708029..74708077,-!p2@KLF12!0.56!8.81!KLF12;;chr5:158526917..158526932,-!p1@EBF1!0.56!7.61!EBF1;;chr18:42260059..42260132,+!p1@SETBP1!0.56!4.80!SETBP1;;chr3:14990132..14990175,+!p5@NR2C2!0.56!3.60!NR2C2;;chr4:81104958..81104981,+!p5@PRDM8!0.56!3.20!PRDM8;;chr19:19779686..19779697,+!p3@ZNF101!0.56!3.20!ZNF101;;chr7:86781734..86781777,+!p1@DMTF1!0.55!58.86!DMTF1;;chr14:45722360..45722415,-!p1@MIS18BP1!0.55!49.65!MIS18BP1;;chr2:113033164..113033219,+!p1@ZC3H6!0.55!26.83!ZC3H6;;chr19:12175535..12175554,+!p1@ZNF844!0.55!17.22!ZNF844;;chr19:9546227..9546257,-!p2@ZNF266!0.55!16.02!ZNF266;;chr19:20959098..20959117,+!p1@ZNF66P!0.55!12.81!ZNF66P;;chr19:37407212..37407280,+!p1@ZNF568!0.55!12.41!ZNF568;;chr15:67357992..67358009,+!p3@SMAD3!0.55!7.21!SMAD3;;chr12:72058060..72058101,+!p5@THAP2!0.55!7.21!THAP2;;chr13:74708372..74708409,-!p4@KLF12!0.55!6.81!KLF12;;chr2:208030886..208030917,-!p4@KLF7!0.55!5.61!KLF7;;chr4:87857433..87857472,+!p9@AFF1!0.55!5.21!AFF1;;chr19:56904947..56904975,-!p2@ZNF582!0.55!4.80!ZNF582;;chr19:37464063..37464127,+!p2@ZNF568!0.55!3.60!ZNF568;;chrX:131624020..131624048,-!p9@MBNL3!0.55!3.20!MBNL3;;chr20:46130846..46130869,+!p5@NCOA3!0.55!2.80!NCOA3;;chr10:38299546..38299686,+!p1@ZNF33A!0.54!45.24!ZNF33A;;chr19:36705998..36706021,+!p2@ZNF146!0.54!44.84!ZNF146;;chr16:3355472..3355514,+!p1@ZNF75A!0.54!43.24!ZNF75A;;chr14:58765217..58765301,+!p1@ARID4A!0.54!28.03!ARID4A;;chr19:21106049..21106072,+!p1@ZNF85!0.54!16.82!ZNF85;;chr1:8763440..8763460,-!p2@RERE!0.54!15.62!RERE;;chr19:58258202..58258226,+!p3@ZNF776!0.54!14.41!ZNF776;;chr10:43134001..43134026,-!p1@ZNF33B!0.54!13.61!ZNF33B;;chr19:23870007..23870022,-!p2@ZNF675!0.54!9.61!ZNF675;;chr4:87857474..87857489,+!p7@AFF1!0.54!4.80!AFF1;;chr18:42260030..42260055,+!p3@SETBP1!0.54!3.20!SETBP1;;chr13:74707894..74707947,-!p6@KLF12!0.54!2.80!KLF12;;chr14:64971346..64971357,-!p9@ZBTB25!0.54!2.80!ZBTB25;;chr11:10879593..10879620,-!p1@ZBED5!0.53!95.69!ZBED5;;chr19:21324829..21324855,+!p1@ZNF431!0.53!48.45!ZNF431;;chr12:498415..498492,-!p1@KDM5A!0.53!34.03!KDM5A;;chr19:21950362..21950388,-!p1@ZNF100!0.53!27.23!ZNF100;;chr5:133450365..133450444,+!p1@TCF7!0.53!13.61!TCF7;;chr19:52800410..52800454,+!p1@ZNF480!0.53!13.21!ZNF480;;chr21:27107672..27107698,+!p2@GABPA!0.53!12.41!GABPA;;chr17:11900745..11900804,-!p1@ZNF18!0.53!11.21!ZNF18;;chr9:3525867..3525902,-!p3@RFX3!0.53!10.01!RFX3;;chr19:58446721..58446779,-!p1@ZNF418!0.53!8.01!ZNF418;;chr15:50647347..50647366,-!p3@GABPB1!0.53!7.21!GABPB1;;chr7:21467642..21467671,+!p2@SP4!0.53!6.41!SP4;;chr19:12512062..12512094,-!p1@ZNF799!0.53!5.61!ZNF799;;chr2:61108771..61108789,+!p4@REL!0.53!4.00!REL;;chr5:124082580..124082603,-!p4@ZNF608!0.53!2.80!ZNF608;;chr5:142782862..142782881,-!p11@NR3C1!0.53!2.40!NR3C1;;chr6:41691289..41691312,-!p9@TFEB!0.53!2.40!TFEB;;chr6:41701557..41701578,-!p3@TFEB!0.53!2.40!TFEB;;chr6:91006629..91006641,-!p4@BACH2!0.53!2.40!BACH2;;chr6:91006719..91006730,-!p5@BACH2!0.53!2.40!BACH2;;chr16:85936600..85936623,+!p4@IRF8!0.53!2.40!IRF8;;chr13:41593405..41593416,-!p9@ELF1!0.53!2.40!ELF1;;chr2:60780485..60780498,-!p12@BCL11A!0.53!2.40!BCL11A;;chr2:97202991..97203043,+!p3@ARID5A!0.53!2.40!ARID5A;;chr1:158978768..158978800,+!p8@IFI16!0.53!2.40!IFI16;;chr21:36421347..36421380,-!p8@RUNX1!0.53!2.40!RUNX1;;chr1:161015752..161015778,-!p2@USF1!0.52!34.83!USF1;;chr19:37064145..37064216,-!p1@ZNF529!0.52!24.82!ZNF529;;chr9:3525968..35260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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000236;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988 | |||
|ffid_belonging_in_development=CL:0000134,CL:0000051 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 66: | Line 41: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|is_a=EFO:0002091;;FF: | |hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation2.CNhs12175.12174-128I5.hg19.nobarcode.bam | ||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation2.CNhs12175.12174-128I5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation2.CNhs12175.12174-128I5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation2.CNhs12175.12174-128I5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090325%252c%2520donation2.CNhs12175.12174-128I5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12174-128I5 | |||
|is_a=EFO:0002091;;FF:0000025;;FF:0000210 | |||
|is_obsolete= | |||
|library_id=CNhs12175 | |||
|library_id_phase_based=2:CNhs12175 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12174 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12174 | |||
|name=CD19+ B Cells (pluriselect), donor090325, donation2 | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs12175,LSID975,release011,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,1.22051193782671,0,0,0,0,0,-0.160318030086386,0.477407785152521,-0.277362132193514,-0.209278131785019,0,0,0,0.146250857583845,0,0,0,0,0,0.531782296320798,0,0,0,-0.153323010348428,0,0,0,0,0.623576738322141,-0.0979578962680575,0,0,0.0132942678049831,0,0,0,0,0,0,0,0,0,0,0,0,-0.171703203282301,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.531782296320798,0,-0.0735651404959503,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0.255463546394952,0,0,0.342657128871699,0,0,0,0,0,0,0,0,0,0,-0.22023803102461,0,0,0,-0.0614829043980065,-0.083465629498393,0,0,0.0731254287919225,0,-0.0980353512377064,0.0328513636349544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0313581792750149,0.146250857583845,0,0,-0.19945778527006,-0.366919008766931,0,0,0,0,0,0 | |||
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| |||
|rna_box=128 | |||
|rna_catalog_number= | |||
|rna_concentration=0.09775 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | |||
|rna_lot_number= | |||
|rna_od260/230=0.87 | |||
|rna_od260/280=1.76 | |||
|rna_position=I5 | |||
|rna_rin= | |||
|rna_sample_type= | |||
|rna_tube_id=128I5 | |||
|rna_weight_ug=2.44375 | |||
|sample_age= | |||
|sample_category=primary cells | |||
|sample_cell_catalog= | |||
|sample_cell_line= | |||
|sample_cell_lot= | |||
|sample_cell_type=b cell | |||
|sample_collaboration=Matched_genome_OSC(contact:Al Forrest) | |||
|sample_company= | |||
|sample_description= | |||
|sample_dev_stage= | |||
|sample_disease= | |||
|sample_donor(cell lot)=ID090325-3 | |||
|sample_ethnicity= | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.95497461043553e-230!GO:0043227;membrane-bound organelle;6.79711794471162e-213!GO:0043231;intracellular membrane-bound organelle;1.4480720875499e-212!GO:0043226;organelle;7.41592741758439e-199!GO:0043229;intracellular organelle;2.0052298466703e-198!GO:0005737;cytoplasm;6.88818553138034e-131!GO:0044422;organelle part;5.27191765577671e-116!GO:0044446;intracellular organelle part;2.05280023721241e-114!GO:0005634;nucleus;4.02972903071698e-111!GO:0044237;cellular metabolic process;2.87995726863077e-102!GO:0043170;macromolecule metabolic process;1.41883334225349e-100!GO:0032991;macromolecular complex;9.41112268528344e-99!GO:0044444;cytoplasmic part;1.12773102115556e-97!GO:0044238;primary metabolic process;2.31636040454335e-97!GO:0030529;ribonucleoprotein complex;7.71602030731675e-88!GO:0003723;RNA binding;2.38155023419835e-84!GO:0044428;nuclear part;9.49051936119707e-80!GO:0010467;gene expression;1.46248373424286e-73!GO:0043283;biopolymer metabolic process;1.16218240661183e-72!GO:0043233;organelle lumen;2.24581059252103e-70!GO:0031974;membrane-enclosed lumen;2.24581059252103e-70!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.53129984879092e-67!GO:0006396;RNA processing;1.0877311769872e-58!GO:0005739;mitochondrion;8.37320412856936e-58!GO:0006412;translation;1.75402992367413e-53!GO:0003676;nucleic acid binding;7.44269731576676e-51!GO:0005840;ribosome;9.55125756205085e-50!GO:0043234;protein complex;4.38762232681142e-49!GO:0031981;nuclear lumen;7.03435776242905e-49!GO:0016071;mRNA metabolic process;3.86833141597238e-47!GO:0033036;macromolecule localization;5.9802238831077e-45!GO:0005515;protein binding;7.61714366124627e-44!GO:0015031;protein transport;7.68051560377975e-44!GO:0045184;establishment of protein localization;3.28438216893712e-42!GO:0003735;structural constituent of ribosome;3.55975442565494e-42!GO:0008380;RNA splicing;6.66353247838041e-42!GO:0019538;protein metabolic process;8.98757016840401e-42!GO:0016070;RNA metabolic process;1.08814708438171e-41!GO:0008104;protein localization;3.82292780546026e-41!GO:0006397;mRNA processing;1.6986126071993e-40!GO:0044267;cellular protein metabolic process;5.37894033712243e-40!GO:0044429;mitochondrial part;9.09081044439381e-40!GO:0044260;cellular macromolecule metabolic process;2.76374777724056e-39!GO:0031090;organelle membrane;3.46018442966563e-39!GO:0009059;macromolecule biosynthetic process;8.98655801932976e-39!GO:0033279;ribosomal subunit;1.03651298496315e-38!GO:0031967;organelle envelope;5.29159745898445e-38!GO:0031975;envelope;1.15357040697178e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.55470172181771e-33!GO:0005654;nucleoplasm;2.21217738043474e-32!GO:0005829;cytosol;2.48561838678951e-32!GO:0006259;DNA metabolic process;1.38308250993499e-31!GO:0044249;cellular biosynthetic process;1.73690616320432e-31!GO:0009058;biosynthetic process;4.58235499473849e-31!GO:0005681;spliceosome;2.56309061545923e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.38374611910348e-30!GO:0065003;macromolecular complex assembly;9.46561347092306e-29!GO:0046907;intracellular transport;1.98314538137015e-28!GO:0006886;intracellular protein transport;1.65817953173193e-27!GO:0044445;cytosolic part;2.34915101109401e-27!GO:0016043;cellular component organization and biogenesis;1.09080837351808e-25!GO:0044451;nucleoplasm part;2.15063114055825e-25!GO:0005740;mitochondrial envelope;1.60613800974135e-24!GO:0022607;cellular component assembly;1.86532604847554e-24!GO:0019866;organelle inner membrane;3.85059553832049e-24!GO:0031966;mitochondrial membrane;4.48065377804956e-23!GO:0006512;ubiquitin cycle;1.5518671188191e-22!GO:0005743;mitochondrial inner membrane;6.97476336552674e-22!GO:0006996;organelle organization and biogenesis;1.00356332990203e-21!GO:0000166;nucleotide binding;1.29581215780766e-21!GO:0015935;small ribosomal subunit;2.26548390559868e-21!GO:0022618;protein-RNA complex assembly;7.82911938156261e-21!GO:0006119;oxidative phosphorylation;1.41590524403183e-20!GO:0044265;cellular macromolecule catabolic process;2.84816864461503e-20!GO:0016874;ligase activity;6.74450777789165e-20!GO:0051649;establishment of cellular localization;1.35120086640149e-19!GO:0051641;cellular localization;3.21250507016044e-19!GO:0006974;response to DNA damage stimulus;4.74711528528243e-19!GO:0008134;transcription factor binding;5.1959394448999e-19!GO:0019941;modification-dependent protein catabolic process;1.73384538813618e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.73384538813618e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.77622137631593e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;1.85558681630613e-18!GO:0043285;biopolymer catabolic process;2.10617589784945e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.23309286484515e-18!GO:0015934;large ribosomal subunit;2.24176883141334e-18!GO:0005730;nucleolus;2.46449052576139e-18!GO:0006511;ubiquitin-dependent protein catabolic process;2.46449052576139e-18!GO:0016462;pyrophosphatase activity;2.46449052576139e-18!GO:0044257;cellular protein catabolic process;3.58543336305064e-18!GO:0016604;nuclear body;4.42526913008252e-18!GO:0043228;non-membrane-bound organelle;4.73676504114453e-18!GO:0043232;intracellular non-membrane-bound organelle;4.73676504114453e-18!GO:0031980;mitochondrial lumen;6.13719941806725e-18!GO:0005759;mitochondrial matrix;6.13719941806725e-18!GO:0017111;nucleoside-triphosphatase activity;6.13719941806725e-18!GO:0044455;mitochondrial membrane part;6.3676407816764e-18!GO:0006281;DNA repair;6.5995501946725e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.14950317063788e-16!GO:0009057;macromolecule catabolic process;2.6129560399976e-16!GO:0019222;regulation of metabolic process;7.32783898035764e-16!GO:0008135;translation factor activity, nucleic acid binding;1.75738469962936e-15!GO:0043412;biopolymer modification;2.53267322044628e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;3.23961598319145e-15!GO:0000375;RNA splicing, via transesterification reactions;3.23961598319145e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.23961598319145e-15!GO:0006457;protein folding;3.3811308511037e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.56060077517322e-15!GO:0006605;protein targeting;4.18979501070711e-15!GO:0005746;mitochondrial respiratory chain;4.5166921360145e-15!GO:0050794;regulation of cellular process;5.56025597958132e-15!GO:0032553;ribonucleotide binding;9.20837855928189e-15!GO:0032555;purine ribonucleotide binding;9.20837855928189e-15!GO:0012505;endomembrane system;9.44486575339158e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;1.16313663584162e-14!GO:0017076;purine nucleotide binding;2.25761830131074e-14!GO:0051276;chromosome organization and biogenesis;2.40547181339555e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.59446594304466e-14!GO:0044248;cellular catabolic process;3.20085973790543e-14!GO:0016607;nuclear speck;3.64501071329441e-14!GO:0012501;programmed cell death;4.40206236362643e-14!GO:0005635;nuclear envelope;4.44313592008047e-14!GO:0006915;apoptosis;4.5780952789568e-14!GO:0031323;regulation of cellular metabolic process;4.70403549224811e-14!GO:0030163;protein catabolic process;4.95560501164959e-14!GO:0006323;DNA packaging;5.24678400061491e-14!GO:0016887;ATPase activity;7.65100487494227e-14!GO:0005524;ATP binding;7.81070431515981e-14!GO:0042623;ATPase activity, coupled;9.87569078908843e-14!GO:0031965;nuclear membrane;1.82238282475385e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.62963568183479e-13!GO:0003954;NADH dehydrogenase activity;2.62963568183479e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.62963568183479e-13!GO:0032559;adenyl ribonucleotide binding;3.08807867562356e-13!GO:0005761;mitochondrial ribosome;3.75871771366925e-13!GO:0000313;organellar ribosome;3.75871771366925e-13!GO:0042254;ribosome biogenesis and assembly;3.8169679066423e-13!GO:0006413;translational initiation;4.62298228148216e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.43126012513007e-13!GO:0003712;transcription cofactor activity;5.43126012513007e-13!GO:0006464;protein modification process;5.66181068783226e-13!GO:0006350;transcription;9.62997765682541e-13!GO:0030554;adenyl nucleotide binding;1.1117948472143e-12!GO:0008219;cell death;1.15688057456265e-12!GO:0016265;death;1.15688057456265e-12!GO:0043687;post-translational protein modification;4.03450716645341e-12!GO:0003743;translation initiation factor activity;4.37759732490543e-12!GO:0008639;small protein conjugating enzyme activity;5.75664414095703e-12!GO:0004386;helicase activity;5.90761835897179e-12!GO:0042775;organelle ATP synthesis coupled electron transport;6.16669001527811e-12!GO:0042773;ATP synthesis coupled electron transport;6.16669001527811e-12!GO:0010468;regulation of gene expression;6.30054474653257e-12!GO:0005694;chromosome;8.84056243279836e-12!GO:0004842;ubiquitin-protein ligase activity;1.04412520418488e-11!GO:0009719;response to endogenous stimulus;1.10695072440646e-11!GO:0006913;nucleocytoplasmic transport;1.25032700071111e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.53980021282251e-11!GO:0045271;respiratory chain complex I;1.53980021282251e-11!GO:0005747;mitochondrial respiratory chain complex I;1.53980021282251e-11!GO:0051169;nuclear transport;2.16597837892277e-11!GO:0006446;regulation of translational initiation;2.29996061535514e-11!GO:0016568;chromatin modification;4.26344210775899e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.55497742800575e-11!GO:0051082;unfolded protein binding;4.68837639214121e-11!GO:0008026;ATP-dependent helicase activity;6.0855704485773e-11!GO:0019787;small conjugating protein ligase activity;6.35523545037332e-11!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.40166863244964e-11!GO:0007049;cell cycle;9.81139584360867e-11!GO:0044453;nuclear membrane part;1.07590375279151e-10!GO:0008270;zinc ion binding;2.29622947354043e-10!GO:0048770;pigment granule;2.87356661518198e-10!GO:0042470;melanosome;2.87356661518198e-10!GO:0051186;cofactor metabolic process;5.42639656583004e-10!GO:0048193;Golgi vesicle transport;6.55229877146445e-10!GO:0006403;RNA localization;7.54153802583096e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.59753921804814e-10!GO:0032774;RNA biosynthetic process;7.81296779345295e-10!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.64304567181827e-10!GO:0050657;nucleic acid transport;9.26755485758739e-10!GO:0051236;establishment of RNA localization;9.26755485758739e-10!GO:0050658;RNA transport;9.26755485758739e-10!GO:0006351;transcription, DNA-dependent;1.03610601448322e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.31501922478075e-09!GO:0044427;chromosomal part;1.33734108451034e-09!GO:0050789;regulation of biological process;1.40094466760781e-09!GO:0003713;transcription coactivator activity;1.87189077294943e-09!GO:0043566;structure-specific DNA binding;1.91016786840135e-09!GO:0016072;rRNA metabolic process;1.99630260701472e-09!GO:0017038;protein import;2.02833388690909e-09!GO:0006333;chromatin assembly or disassembly;2.08046019591087e-09!GO:0005643;nuclear pore;2.37135876347361e-09!GO:0006399;tRNA metabolic process;2.7110231039867e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.7110231039867e-09!GO:0006364;rRNA processing;2.79892544581632e-09!GO:0045449;regulation of transcription;2.86589600806933e-09!GO:0009259;ribonucleotide metabolic process;2.96940566395041e-09!GO:0015078;hydrogen ion transmembrane transporter activity;3.72350482796589e-09!GO:0019829;cation-transporting ATPase activity;4.21664438935739e-09!GO:0042981;regulation of apoptosis;4.35364607590695e-09!GO:0043067;regulation of programmed cell death;6.01224619166116e-09!GO:0005783;endoplasmic reticulum;8.22884645267155e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.03883516380314e-09!GO:0005794;Golgi apparatus;9.51297179344562e-09!GO:0009260;ribonucleotide biosynthetic process;1.079741573848e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.17929157158226e-08!GO:0006163;purine nucleotide metabolic process;1.18474357215575e-08!GO:0006164;purine nucleotide biosynthetic process;1.31396634927413e-08!GO:0016881;acid-amino acid ligase activity;1.33706270746874e-08!GO:0044432;endoplasmic reticulum part;1.56424197886638e-08!GO:0065002;intracellular protein transport across a membrane;2.02527139789474e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.18756539298877e-08!GO:0006732;coenzyme metabolic process;2.76095482674002e-08!GO:0065004;protein-DNA complex assembly;2.90913036028333e-08!GO:0009150;purine ribonucleotide metabolic process;3.18694025324581e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.38576289115653e-08!GO:0051028;mRNA transport;3.39933766412949e-08!GO:0015986;ATP synthesis coupled proton transport;3.98410429235453e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.98410429235453e-08!GO:0051246;regulation of protein metabolic process;4.30760852583647e-08!GO:0008565;protein transporter activity;4.39287060800333e-08!GO:0046914;transition metal ion binding;4.71488651836725e-08!GO:0016192;vesicle-mediated transport;5.50142917860546e-08!GO:0046930;pore complex;6.16290106694408e-08!GO:0022402;cell cycle process;7.07353280855563e-08!GO:0006366;transcription from RNA polymerase II promoter;8.64654862694781e-08!GO:0006260;DNA replication;8.771683308884e-08!GO:0006355;regulation of transcription, DNA-dependent;9.27802822776762e-08!GO:0003697;single-stranded DNA binding;9.62862907992739e-08!GO:0004298;threonine endopeptidase activity;1.00530470813373e-07!GO:0016787;hydrolase activity;1.20455039237029e-07!GO:0009056;catabolic process;1.43099309598138e-07!GO:0051726;regulation of cell cycle;1.44964338706816e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.54879734603054e-07!GO:0003677;DNA binding;1.5568654637108e-07!GO:0000785;chromatin;1.64444530693279e-07!GO:0000074;regulation of progression through cell cycle;1.74736509395703e-07!GO:0005768;endosome;1.92254014671306e-07!GO:0032446;protein modification by small protein conjugation;2.14033581376272e-07!GO:0000245;spliceosome assembly;2.25183392640131e-07!GO:0016563;transcription activator activity;2.88568197745388e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.9243605463064e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.28333275205267e-07!GO:0006754;ATP biosynthetic process;3.36190517151278e-07!GO:0006753;nucleoside phosphate metabolic process;3.36190517151278e-07!GO:0006793;phosphorus metabolic process;3.47904044107628e-07!GO:0006796;phosphate metabolic process;3.47904044107628e-07!GO:0005789;endoplasmic reticulum membrane;3.81043140716608e-07!GO:0000151;ubiquitin ligase complex;3.98615380156244e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.03704869458741e-07!GO:0009142;nucleoside triphosphate biosynthetic process;4.04094388885402e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.04094388885402e-07!GO:0016779;nucleotidyltransferase activity;4.10598470963519e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.33422384054398e-07!GO:0009060;aerobic respiration;4.39352147459111e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.66531803108204e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.66531803108204e-07!GO:0016567;protein ubiquitination;5.74053969951232e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.99376691463661e-07!GO:0016310;phosphorylation;6.80847378705853e-07!GO:0009199;ribonucleoside triphosphate metabolic process;8.29126799652831e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;9.88426901929732e-07!GO:0009144;purine nucleoside triphosphate metabolic process;9.88426901929732e-07!GO:0009141;nucleoside triphosphate metabolic process;9.99195629469106e-07!GO:0046034;ATP metabolic process;1.18843676250648e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.74102419821107e-06!GO:0006461;protein complex assembly;1.87004429315603e-06!GO:0031324;negative regulation of cellular metabolic process;1.90805947016462e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.98681945805875e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.98681945805875e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.98681945805875e-06!GO:0045259;proton-transporting ATP synthase complex;1.98681945805875e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.20894392144187e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.29877610292873e-06!GO:0045333;cellular respiration;2.41389548793012e-06!GO:0051170;nuclear import;3.01175353277025e-06!GO:0051188;cofactor biosynthetic process;3.33767214769237e-06!GO:0007243;protein kinase cascade;3.42787845278226e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.6445740415187e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.29553327159502e-06!GO:0016564;transcription repressor activity;4.68288976254648e-06!GO:0043038;amino acid activation;4.80431660550633e-06!GO:0006418;tRNA aminoacylation for protein translation;4.80431660550633e-06!GO:0043039;tRNA aminoacylation;4.80431660550633e-06!GO:0006401;RNA catabolic process;4.88924562014856e-06!GO:0003724;RNA helicase activity;5.2075579995779e-06!GO:0009055;electron carrier activity;5.2075579995779e-06!GO:0006606;protein import into nucleus;5.79245026874084e-06!GO:0065007;biological regulation;6.66889089959897e-06!GO:0019899;enzyme binding;7.28717353736449e-06!GO:0006613;cotranslational protein targeting to membrane;7.55543899254195e-06!GO:0016481;negative regulation of transcription;8.17288313505244e-06!GO:0005770;late endosome;1.02767271930204e-05!GO:0009615;response to virus;1.10052150844526e-05!GO:0006099;tricarboxylic acid cycle;1.18654635949153e-05!GO:0046356;acetyl-CoA catabolic process;1.18654635949153e-05!GO:0016740;transferase activity;1.19667110159641e-05!GO:0005773;vacuole;1.233258076667e-05!GO:0007005;mitochondrion organization and biogenesis;1.70678774764927e-05!GO:0030120;vesicle coat;1.80862140262419e-05!GO:0030662;coated vesicle membrane;1.80862140262419e-05!GO:0009108;coenzyme biosynthetic process;1.8383186844854e-05!GO:0006417;regulation of translation;1.8383186844854e-05!GO:0005793;ER-Golgi intermediate compartment;1.89192543240252e-05!GO:0006084;acetyl-CoA metabolic process;2.15674473007224e-05!GO:0065009;regulation of a molecular function;2.25020951337954e-05!GO:0000323;lytic vacuole;2.62386198336135e-05!GO:0005764;lysosome;2.62386198336135e-05!GO:0003690;double-stranded DNA binding;2.67390839115046e-05!GO:0006752;group transfer coenzyme metabolic process;2.80827149863708e-05!GO:0051168;nuclear export;2.80827149863708e-05!GO:0031497;chromatin assembly;2.90197741720623e-05!GO:0045786;negative regulation of progression through cell cycle;2.90197741720623e-05!GO:0048475;coated membrane;3.58563421747981e-05!GO:0030117;membrane coat;3.58563421747981e-05!GO:0006334;nucleosome assembly;3.62574965558045e-05!GO:0044440;endosomal part;4.45551073593013e-05!GO:0010008;endosome membrane;4.45551073593013e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.83898438368764e-05!GO:0015399;primary active transmembrane transporter activity;4.83898438368764e-05!GO:0009117;nucleotide metabolic process;4.86399185481563e-05!GO:0043069;negative regulation of programmed cell death;5.02838198096712e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.47120559930826e-05!GO:0009892;negative regulation of metabolic process;6.98438112383174e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.16443028711118e-05!GO:0043066;negative regulation of apoptosis;7.19597006844279e-05!GO:0006402;mRNA catabolic process;7.50250542962929e-05!GO:0009109;coenzyme catabolic process;8.35173310661717e-05!GO:0006261;DNA-dependent DNA replication;8.41316800577368e-05!GO:0006612;protein targeting to membrane;8.84868204533125e-05!GO:0000278;mitotic cell cycle;9.77607868378998e-05!GO:0043065;positive regulation of apoptosis;0.000132613817173534!GO:0031072;heat shock protein binding;0.000140847169120875!GO:0005813;centrosome;0.000141660292257223!GO:0000314;organellar small ribosomal subunit;0.000152443454337502!GO:0005763;mitochondrial small ribosomal subunit;0.000152443454337502!GO:0006916;anti-apoptosis;0.000155060507134599!GO:0008186;RNA-dependent ATPase activity;0.000155507863532526!GO:0048523;negative regulation of cellular process;0.000162037760237437!GO:0030384;phosphoinositide metabolic process;0.000162864269588642!GO:0044431;Golgi apparatus part;0.000171690996388101!GO:0031326;regulation of cellular biosynthetic process;0.000174445960666532!GO:0006310;DNA recombination;0.000178819917241086!GO:0005885;Arp2/3 protein complex;0.00018258344796642!GO:0051187;cofactor catabolic process;0.00018258344796642!GO:0043068;positive regulation of programmed cell death;0.000186610164671138!GO:0006818;hydrogen transport;0.000214730367184848!GO:0015992;proton transport;0.000220955665192568!GO:0016197;endosome transport;0.00023623491594355!GO:0042113;B cell activation;0.000241642948254701!GO:0008033;tRNA processing;0.000252530676784552!GO:0005762;mitochondrial large ribosomal subunit;0.000261639931590041!GO:0000315;organellar large ribosomal subunit;0.000261639931590041!GO:0003899;DNA-directed RNA polymerase activity;0.000270949817963885!GO:0016741;transferase activity, transferring one-carbon groups;0.000299453673381491!GO:0003714;transcription corepressor activity;0.000300934010910168!GO:0008168;methyltransferase activity;0.00030322642694437!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000309188236204486!GO:0003729;mRNA binding;0.000330979150404483!GO:0006917;induction of apoptosis;0.000349426622378664!GO:0043681;protein import into mitochondrion;0.000349426622378664!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000362102715596895!GO:0005667;transcription factor complex;0.000372693071966137!GO:0043623;cellular protein complex assembly;0.000390185710878492!GO:0005815;microtubule organizing center;0.000391886006154254!GO:0016251;general RNA polymerase II transcription factor activity;0.000406077988787113!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000417183878263313!GO:0043492;ATPase activity, coupled to movement of substances;0.000443073733742901!GO:0016363;nuclear matrix;0.000463301692157208!GO:0004004;ATP-dependent RNA helicase activity;0.000472763131073863!GO:0012502;induction of programmed cell death;0.00048481915575832!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000506625311383026!GO:0051427;hormone receptor binding;0.00053024638369748!GO:0008234;cysteine-type peptidase activity;0.000536063450997923!GO:0003924;GTPase activity;0.000557266556222548!GO:0008632;apoptotic program;0.000568055900953267!GO:0008654;phospholipid biosynthetic process;0.0005802856355585!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000591069202445264!GO:0043021;ribonucleoprotein binding;0.000599420073176314!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000636535704388376!GO:0006650;glycerophospholipid metabolic process;0.000637222133704335!GO:0006352;transcription initiation;0.000673883103651763!GO:0042613;MHC class II protein complex;0.000679197304073157!GO:0005769;early endosome;0.000743946746741092!GO:0007264;small GTPase mediated signal transduction;0.000755220524731302!GO:0004518;nuclease activity;0.000761830564134471!GO:0045892;negative regulation of transcription, DNA-dependent;0.000856409354525205!GO:0051252;regulation of RNA metabolic process;0.000874651521678798!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000926321906983854!GO:0005798;Golgi-associated vesicle;0.000930599896294926!GO:0035257;nuclear hormone receptor binding;0.000958922034779472!GO:0022890;inorganic cation transmembrane transporter activity;0.000987896637276345!GO:0009889;regulation of biosynthetic process;0.00105028929757215!GO:0044452;nucleolar part;0.00114000287187842!GO:0046489;phosphoinositide biosynthetic process;0.00118286055475348!GO:0006891;intra-Golgi vesicle-mediated transport;0.00123177327015376!GO:0000087;M phase of mitotic cell cycle;0.00132552624579301!GO:0007265;Ras protein signal transduction;0.00133013793337996!GO:0003684;damaged DNA binding;0.00133769647438135!GO:0007242;intracellular signaling cascade;0.00135997013926829!GO:0003711;transcription elongation regulator activity;0.00135997013926829!GO:0005774;vacuolar membrane;0.00139732322169433!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00141978814371568!GO:0050790;regulation of catalytic activity;0.00146643479551008!GO:0005525;GTP binding;0.0015659331979678!GO:0031902;late endosome membrane;0.00158115391863387!GO:0043488;regulation of mRNA stability;0.001640439404202!GO:0043487;regulation of RNA stability;0.001640439404202!GO:0004674;protein serine/threonine kinase activity;0.00165819480831792!GO:0007067;mitosis;0.00170964862902464!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00173327961732441!GO:0009165;nucleotide biosynthetic process;0.00188296362134154!GO:0006302;double-strand break repair;0.00189858077714222!GO:0004527;exonuclease activity;0.00195317702611792!GO:0006414;translational elongation;0.00195367848412645!GO:0003725;double-stranded RNA binding;0.00211581726352532!GO:0046474;glycerophospholipid biosynthetic process;0.00222365552368135!GO:0048500;signal recognition particle;0.00225289574660379!GO:0019843;rRNA binding;0.00226449934559659!GO:0048519;negative regulation of biological process;0.00226720693561064!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00238426349273861!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00238426349273861!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00238426349273861!GO:0007006;mitochondrial membrane organization and biogenesis;0.00249206578950608!GO:0006289;nucleotide-excision repair;0.00249573730455826!GO:0005637;nuclear inner membrane;0.0027696647786574!GO:0006383;transcription from RNA polymerase III promoter;0.002833458414435!GO:0043087;regulation of GTPase activity;0.00286712266696665!GO:0005684;U2-dependent spliceosome;0.00286905067273059!GO:0051789;response to protein stimulus;0.00299474359220873!GO:0006986;response to unfolded protein;0.00299474359220873!GO:0044437;vacuolar part;0.0031578234550371!GO:0048471;perinuclear region of cytoplasm;0.00343599329787857!GO:0045454;cell redox homeostasis;0.00352880868005404!GO:0022403;cell cycle phase;0.0035850562297742!GO:0005765;lysosomal membrane;0.00362552944655809!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00365789215423932!GO:0045047;protein targeting to ER;0.00365789215423932!GO:0008312;7S RNA binding;0.00367416057586135!GO:0051301;cell division;0.00377610553045336!GO:0006405;RNA export from nucleus;0.00383123098025516!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00391789795388009!GO:0015002;heme-copper terminal oxidase activity;0.00391789795388009!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00391789795388009!GO:0004129;cytochrome-c oxidase activity;0.00391789795388009!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00391789795388009!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00391789795388009!GO:0005657;replication fork;0.00431780908881734!GO:0000139;Golgi membrane;0.00452135350936334!GO:0004532;exoribonuclease activity;0.00472262055346199!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00472262055346199!GO:0030518;steroid hormone receptor signaling pathway;0.00485062684762832!GO:0000786;nucleosome;0.00494409923763514!GO:0009967;positive regulation of signal transduction;0.0050318942592629!GO:0005741;mitochondrial outer membrane;0.0051602075960517!GO:0007034;vacuolar transport;0.00517872665437682!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00532907740686709!GO:0006626;protein targeting to mitochondrion;0.00534871235214903!GO:0033116;ER-Golgi intermediate compartment membrane;0.00546708301245472!GO:0051920;peroxiredoxin activity;0.00556786750447432!GO:0047485;protein N-terminus binding;0.00556875767450243!GO:0046966;thyroid hormone receptor binding;0.00568899565370688!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00574180034476037!GO:0030041;actin filament polymerization;0.00585165161674164!GO:0005048;signal sequence binding;0.0059434500944891!GO:0006611;protein export from nucleus;0.00595906215759908!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00619425429520465!GO:0016584;nucleosome positioning;0.00644715689463522!GO:0008047;enzyme activator activity;0.00663398483380492!GO:0005669;transcription factor TFIID complex;0.00678580779381951!GO:0051336;regulation of hydrolase activity;0.00696197316836477!GO:0051087;chaperone binding;0.0070029977407174!GO:0006950;response to stress;0.00707496487788934!GO:0030521;androgen receptor signaling pathway;0.00710964603155508!GO:0030433;ER-associated protein catabolic process;0.00740481535474851!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00740481535474851!GO:0016605;PML body;0.00744611699672086!GO:0031968;organelle outer membrane;0.00748122624030791!GO:0030658;transport vesicle membrane;0.0075860318514299!GO:0051052;regulation of DNA metabolic process;0.00766685810476644!GO:0045947;negative regulation of translational initiation;0.0080210989205934!GO:0031252;leading edge;0.00831532886820047!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00843197645593882!GO:0019867;outer membrane;0.00843197645593882!GO:0019783;small conjugating protein-specific protease activity;0.00846394635366312!GO:0006284;base-excision repair;0.00887763626917221!GO:0032561;guanyl ribonucleotide binding;0.00898809628185083!GO:0019001;guanyl nucleotide binding;0.00898809628185083!GO:0008408;3'-5' exonuclease activity;0.00933231418377116!GO:0006839;mitochondrial transport;0.00959033125439658!GO:0031625;ubiquitin protein ligase binding;0.00973296400285865!GO:0004843;ubiquitin-specific protease activity;0.00984798572967559!GO:0046649;lymphocyte activation;0.00996508087927175!GO:0000118;histone deacetylase complex;0.00996508087927175!GO:0031901;early endosome membrane;0.0100377959186428!GO:0006376;mRNA splice site selection;0.0102418379349228!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0102418379349228!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0103337375055276!GO:0030663;COPI coated vesicle membrane;0.010577883881486!GO:0030126;COPI vesicle coat;0.010577883881486!GO:0016859;cis-trans isomerase activity;0.0110503546613517!GO:0003678;DNA helicase activity;0.0115817066454392!GO:0030137;COPI-coated vesicle;0.0116393859972128!GO:0003746;translation elongation factor activity;0.0117558929277777!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0118284723375529!GO:0006338;chromatin remodeling;0.0118370231628715!GO:0000287;magnesium ion binding;0.0123088191411084!GO:0032200;telomere organization and biogenesis;0.0123088191411084!GO:0000723;telomere maintenance;0.0123088191411084!GO:0048522;positive regulation of cellular process;0.0123467574068678!GO:0046467;membrane lipid biosynthetic process;0.0124392856257474!GO:0030695;GTPase regulator activity;0.0128277250472909!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0131554742847529!GO:0031124;mRNA 3'-end processing;0.0132636498859729!GO:0051539;4 iron, 4 sulfur cluster binding;0.0137539956513714!GO:0008094;DNA-dependent ATPase activity;0.0138869673442279!GO:0032259;methylation;0.0139730930773026!GO:0006607;NLS-bearing substrate import into nucleus;0.014319671666767!GO:0000119;mediator complex;0.0145990632096024!GO:0042802;identical protein binding;0.0146367362853277!GO:0016272;prefoldin complex;0.0146474808572792!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0150521081294259!GO:0003682;chromatin binding;0.0158358145060363!GO:0000049;tRNA binding;0.0158998093414452!GO:0015631;tubulin binding;0.0159112531673001!GO:0030258;lipid modification;0.0160714994079034!GO:0030660;Golgi-associated vesicle membrane;0.0161904501848829!GO:0006506;GPI anchor biosynthetic process;0.0162572671089905!GO:0000279;M phase;0.0163782848608073!GO:0004221;ubiquitin thiolesterase activity;0.0165764763292864!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0170449271936674!GO:0030118;clathrin coat;0.0175191904121389!GO:0030880;RNA polymerase complex;0.0177872867408955!GO:0006919;caspase activation;0.0182322391590712!GO:0043414;biopolymer methylation;0.0183727031506684!GO:0015980;energy derivation by oxidation of organic compounds;0.0184837565002172!GO:0009451;RNA modification;0.0185241344626231!GO:0000178;exosome (RNase complex);0.0185425429063862!GO:0006595;polyamine metabolic process;0.0190935300210921!GO:0007004;telomere maintenance via telomerase;0.0194884770653814!GO:0000075;cell cycle checkpoint;0.0194947611238097!GO:0016853;isomerase activity;0.0195341216830653!GO:0008017;microtubule binding;0.0195572134152959!GO:0005832;chaperonin-containing T-complex;0.0200635034048437!GO:0030833;regulation of actin filament polymerization;0.020071098097071!GO:0015630;microtubule cytoskeleton;0.0201749873998438!GO:0008097;5S rRNA binding;0.0201779734874547!GO:0000209;protein polyubiquitination;0.0206936232681517!GO:0051540;metal cluster binding;0.0207626092640339!GO:0051536;iron-sulfur cluster binding;0.0207626092640339!GO:0031123;RNA 3'-end processing;0.0209580933232439!GO:0019883;antigen processing and presentation of endogenous antigen;0.0209580933232439!GO:0007041;lysosomal transport;0.0210520137319927!GO:0043281;regulation of caspase activity;0.0214294499440251!GO:0000738;DNA catabolic process, exonucleolytic;0.0220949264461264!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0224007789861677!GO:0006505;GPI anchor metabolic process;0.0224859311750986!GO:0000059;protein import into nucleus, docking;0.0243273493999236!GO:0043022;ribosome binding;0.0250276437942429!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0252321421788004!GO:0006672;ceramide metabolic process;0.0258873751060789!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0262819189669794!GO:0045730;respiratory burst;0.0263439372946251!GO:0018193;peptidyl-amino acid modification;0.0267178071119829!GO:0030867;rough endoplasmic reticulum membrane;0.0267418873970152!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0269136112236891!GO:0000776;kinetochore;0.0269539335355279!GO:0032318;regulation of Ras GTPase activity;0.0274380848867863!GO:0006497;protein amino acid lipidation;0.0274971178669315!GO:0050871;positive regulation of B cell activation;0.0275855051912472!GO:0004197;cysteine-type endopeptidase activity;0.0277108788608699!GO:0046822;regulation of nucleocytoplasmic transport;0.027916431474123!GO:0008139;nuclear localization sequence binding;0.0279370375287436!GO:0006091;generation of precursor metabolites and energy;0.0287807532389614!GO:0015923;mannosidase activity;0.0291889143269674!GO:0000175;3'-5'-exoribonuclease activity;0.0292007559355291!GO:0004402;histone acetyltransferase activity;0.0292081691884182!GO:0004468;lysine N-acetyltransferase activity;0.0292081691884182!GO:0019814;immunoglobulin complex;0.0293257316787393!GO:0019815;B cell receptor complex;0.0293257316787393!GO:0006368;RNA elongation from RNA polymerase II promoter;0.029756034881259!GO:0046519;sphingoid metabolic process;0.0305751814761032!GO:0043550;regulation of lipid kinase activity;0.0307250960143285!GO:0050853;B cell receptor signaling pathway;0.0308925337766324!GO:0022406;membrane docking;0.0309372263003195!GO:0048278;vesicle docking;0.0309372263003195!GO:0007040;lysosome organization and biogenesis;0.031043891654386!GO:0030522;intracellular receptor-mediated signaling pathway;0.031043891654386!GO:0009116;nucleoside metabolic process;0.0310582389372371!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0314563963066738!GO:0009112;nucleobase metabolic process;0.0318139291497262!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0318139291497262!GO:0000428;DNA-directed RNA polymerase complex;0.0318139291497262!GO:0004722;protein serine/threonine phosphatase activity;0.0321307874919454!GO:0000726;non-recombinational repair;0.0322377447522235!GO:0032940;secretion by cell;0.0329326918960095!GO:0045045;secretory pathway;0.0330677977865066!GO:0006516;glycoprotein catabolic process;0.0332667519477856!GO:0008538;proteasome activator activity;0.033301873458936!GO:0005758;mitochondrial intermembrane space;0.0333596881160315!GO:0032508;DNA duplex unwinding;0.0337372787175745!GO:0032392;DNA geometric change;0.0337372787175745!GO:0008287;protein serine/threonine phosphatase complex;0.0338368602039999!GO:0007050;cell cycle arrest;0.0338728258640866!GO:0060090;molecular adaptor activity;0.0338896291044964!GO:0042824;MHC class I peptide loading complex;0.0340912333254197!GO:0043596;nuclear replication fork;0.0344009444568932!GO:0030125;clathrin vesicle coat;0.034730387062473!GO:0030665;clathrin coated vesicle membrane;0.034730387062473!GO:0030133;transport vesicle;0.034730387062473!GO:0035258;steroid hormone receptor binding;0.0347782970538156!GO:0005521;lamin binding;0.0353992396885859!GO:0004003;ATP-dependent DNA helicase activity;0.0356218464438314!GO:0004576;oligosaccharyl transferase activity;0.0364088622250104!GO:0009161;ribonucleoside monophosphate metabolic process;0.0364473156195254!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0364473156195254!GO:0031982;vesicle;0.0378841758139234!GO:0045603;positive regulation of endothelial cell differentiation;0.0378841758139234!GO:0000339;RNA cap binding;0.0379780448764437!GO:0002764;immune response-regulating signal transduction;0.0381904156466773!GO:0006144;purine base metabolic process;0.0386481495730893!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0391022234460622!GO:0005869;dynactin complex;0.0393358008219617!GO:0008180;signalosome;0.0393358008219617!GO:0008022;protein C-terminus binding;0.0394406782782466!GO:0032039;integrator complex;0.0403149218190682!GO:0045321;leukocyte activation;0.040514717598833!GO:0046854;phosphoinositide phosphorylation;0.0411209417282388!GO:0006904;vesicle docking during exocytosis;0.0412808261176286!GO:0007021;tubulin folding;0.0414042812551356!GO:0004428;inositol or phosphatidylinositol kinase activity;0.041834129210741!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.04185224046234!GO:0031647;regulation of protein stability;0.0422160395140816!GO:0043280;positive regulation of caspase activity;0.0424618842901812!GO:0000781;chromosome, telomeric region;0.0425567682980495!GO:0048487;beta-tubulin binding;0.0426479638645255!GO:0051059;NF-kappaB binding;0.0428240627924764!GO:0005784;translocon complex;0.0435876548250823!GO:0000123;histone acetyltransferase complex;0.0437584480830663!GO:0006914;autophagy;0.0437584480830663!GO:0001667;ameboidal cell migration;0.0443958435952293!GO:0032027;myosin light chain binding;0.0443958435952293!GO:0043506;regulation of JNK activity;0.0451210535249212!GO:0016569;covalent chromatin modification;0.0454074703498059!GO:0019904;protein domain specific binding;0.045540035834826!GO:0046979;TAP2 binding;0.0457481852176562!GO:0046977;TAP binding;0.0457481852176562!GO:0046978;TAP1 binding;0.0457481852176562!GO:0050851;antigen receptor-mediated signaling pathway;0.0457728049262052!GO:0030119;AP-type membrane coat adaptor complex;0.0458875474666858!GO:0008250;oligosaccharyl transferase complex;0.0461059058466881!GO:0016570;histone modification;0.0461059058466881!GO:0005083;small GTPase regulator activity;0.0464923454933883!GO:0004540;ribonuclease activity;0.0470405364344804!GO:0006378;mRNA polyadenylation;0.0474675512600867!GO:0044438;microbody part;0.0478444251659222!GO:0044439;peroxisomal part;0.0478444251659222!GO:0009124;nucleoside monophosphate biosynthetic process;0.0481137907915159!GO:0009123;nucleoside monophosphate metabolic process;0.0481137907915159!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.048471602887503!GO:0007033;vacuole organization and biogenesis;0.0495331415820272 | |||
|sample_id=12174 | |||
|sample_note= | |||
|sample_sex=male | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue=blood | |||
|top_motifs=POU2F1..3:2.96455664466;POU5F1:2.79616417294;FOXA2:2.50021020146;ELF1,2,4:1.89996697002;DMAP1_NCOR{1,2}_SMARC:1.87007237985;FOX{I1,J2}:1.6931170037;FOXO1,3,4:1.62047187018;TLX2:1.58629870858;PBX1:1.5734823114;FOX{F1,F2,J1}:1.56237898817;SPI1:1.49168201539;ELK1,4_GABP{A,B1}:1.48781488359;IRF1,2:1.44329689995;FOX{D1,D2}:1.3768380014;ETS1,2:1.20455911625;SPIB:1.20056475576;YY1:1.15879884512;RUNX1..3:1.15701273775;NANOG{mouse}:1.13124169645;CDX1,2,4:1.0986871209;PAX6:1.08206139606;FOXP3:1.06867298778;CRX:1.03632460677;NFKB1_REL_RELA:0.994147116916;OCT4_SOX2{dimer}:0.970082642521;RORA:0.967631977287;LMO2:0.961843763529;RFX2..5_RFXANK_RFXAP:0.95065239852;VSX1,2:0.92694375279;BPTF:0.897640235439;STAT1,3:0.839599009977;FOXN1:0.784506086188;IRF7:0.752724322052;ALX1:0.751999823853;AIRE:0.75174535401;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.743365452878;NKX6-1,2:0.73986700486;ZEB1:0.677339978008;BREu{core}:0.647680680164;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.616023113768;HBP1_HMGB_SSRP1_UBTF:0.581665903174;MYOD1:0.554796953506;MYB:0.542599800522;SNAI1..3:0.536184695288;SOX5:0.536155700304;NKX2-1,4:0.499425084493;HES1:0.495994538631;PDX1:0.49357718555;HMX1:0.472839572638;CUX2:0.440960736817;SREBF1,2:0.432283191378;NRF1:0.432273351998;CREB1:0.430042061414;TGIF1:0.391244937243;ZNF143:0.384545772177;GATA6:0.378272022435;FOXP1:0.365343520163;NKX2-2,8:0.345922230046;PAX3,7:0.341888726108;NR5A1,2:0.338853800093;ATF5_CREB3:0.332152474514;HOX{A6,A7,B6,B7}:0.297268670922;HAND1,2:0.254879788284;NHLH1,2:0.250596987595;ADNP_IRX_SIX_ZHX:0.242119913122;ESR1:0.224408411937;EP300:0.223139673325;MEF2{A,B,C,D}:0.160380107895;SOX{8,9,10}:0.0981959095958;FOXQ1:0.0772904100107;ATF4:0.0683812377704;RXRA_VDR{dimer}:0.0484753248556;ZBTB16:0.0295133459521;PRRX1,2:0.0259754798672;HIF1A:0.0190980496442;AHR_ARNT_ARNT2:-0.00668066206277;T:-0.0137093448817;ATF2:-0.0389208526936;HOX{A4,D4}:-0.0558487551224;NFIL3:-0.07774504621;NFATC1..3:-0.0965404183435;NFY{A,B,C}:-0.113533210519;SPZ1:-0.122363342243;HNF4A_NR2F1,2:-0.132733358052;ZFP161:-0.137110628975;PAX2:-0.145358302536;POU1F1:-0.163466381539;CDC5L:-0.174690950645;NFIX:-0.199637380959;NR6A1:-0.214596983832;LEF1_TCF7_TCF7L1,2:-0.216906518671;TEF:-0.232614589678;TFAP4:-0.24263679563;ZNF148:-0.24697136534;IKZF2:-0.255101377819;E2F1..5:-0.264837261888;TOPORS:-0.26710817254;EVI1:-0.280163748487;AR:-0.285315706432;EBF1:-0.308515249381;STAT5{A,B}:-0.347703930585;NKX2-3_NKX2-5:-0.358972405739;HNF1A:-0.364300438797;GFI1:-0.378861113785;ARID5B:-0.384924784028;FOXL1:-0.395073984175;ALX4:-0.395821083393;GLI1..3:-0.405332639847;RBPJ:-0.408700783547;ATF6:-0.40914761641;PRDM1:-0.410164967635;TAL1_TCF{3,4,12}:-0.426105385192;DBP:-0.506165766128;SMAD1..7,9:-0.519908845987;ONECUT1,2:-0.52639482963;RXR{A,B,G}:-0.529250547794;TFCP2:-0.529263247593;NANOG:-0.532018291062;HMGA1,2:-0.596760261187;PAX4:-0.608307516154;PPARG:-0.624644182992;JUN:-0.63425549366;MYFfamily:-0.666929531011;MAFB:-0.685080323672;FOS_FOS{B,L1}_JUN{B,D}:-0.68565383433;RFX1:-0.691765152745;EGR1..3:-0.707850981222;CEBPA,B_DDIT3:-0.710409563635;MYBL2:-0.711542483988;FOSL2:-0.732224848491;NKX3-2:-0.735416514286;bHLH_family:-0.75630005745;PATZ1:-0.770567414359;HOXA9_MEIS1:-0.779859223067;EN1,2:-0.784819586098;BACH2:-0.787904780245;TBX4,5:-0.822059999733;ZNF238:-0.838908306464;XCPE1{core}:-0.841456625936;NKX3-1:-0.847456180696;SOX17:-0.852646406403;HOX{A5,B5}:-0.858621322957;FOXM1:-0.877343205854;NR1H4:-0.881580319258;GATA4:-0.887759057586;POU6F1:-0.894824189691;RREB1:-0.902503767043;MTE{core}:-0.925212057402;HLF:-0.934319683132;REST:-0.93576904453;SOX2:-0.956877902214;NFE2:-0.994323119019;ZNF384:-0.998464233194;GFI1B:-1.00939062575;SRF:-1.0399067673;MED-1{core}:-1.05081542946;MAZ:-1.07011543766;MZF1:-1.074205623;LHX3,4:-1.09984693538;PITX1..3:-1.16355643334;MTF1:-1.18991428375;NR3C1:-1.20247199028;STAT2,4,6:-1.21574596454;TP53:-1.2569078817;GZF1:-1.2869710994;GCM1,2:-1.29428153283;UFEwm:-1.29969421483;HSF1,2:-1.32835537872;XBP1:-1.35644389177;TBP:-1.36256876822;NFE2L2:-1.39403856481;SP1:-1.45707509995;ZNF423:-1.47927212017;TFAP2B:-1.4867824605;GTF2I:-1.51247706506;FOXD3:-1.53856169125;ESRRA:-1.59671260174;TEAD1:-1.59677127104;TFAP2{A,C}:-1.60942702191;ZIC1..3:-1.6467608289;POU3F1..4:-1.68843820634;PAX5:-1.69932048357;HIC1:-1.7111148611;NFE2L1:-1.73004033993;KLF4:-1.79589536207;GTF2A1,2:-1.81188214696;PAX1,9:-1.81290980649;PAX8:-1.81795435255;ZBTB6:-1.82147637181;TFDP1:-1.92090538064;TLX1..3_NFIC{dimer}:-1.92147907402;IKZF1:-2.05715404573 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12174-128I5;search_select_hide=table117:FF:12174-128I5 | |||
}} | }} |
Latest revision as of 18:32, 4 June 2020
Name: | CD19+ B Cells (pluriselect), donor090325, donation2 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12175 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12175
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12175
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0885 |
10 | 10 | 0.0222 |
100 | 100 | 0.671 |
101 | 101 | 0.252 |
102 | 102 | 0.956 |
103 | 103 | 0.0556 |
104 | 104 | 0.163 |
105 | 105 | 0.507 |
106 | 106 | 0.948 |
107 | 107 | 0.183 |
108 | 108 | 0.215 |
109 | 109 | 0.0833 |
11 | 11 | 0.127 |
110 | 110 | 0.272 |
111 | 111 | 0.0713 |
112 | 112 | 0.426 |
113 | 113 | 0.027 |
114 | 114 | 0.515 |
115 | 115 | 0.972 |
116 | 116 | 0.734 |
117 | 117 | 0.00109 |
118 | 118 | 0.14 |
119 | 119 | 0.71 |
12 | 12 | 0.919 |
120 | 120 | 0.709 |
121 | 121 | 0.308 |
122 | 122 | 0.458 |
123 | 123 | 0.0579 |
124 | 124 | 0.082 |
125 | 125 | 0.203 |
126 | 126 | 0.425 |
127 | 127 | 0.614 |
128 | 128 | 0.377 |
129 | 129 | 0.996 |
13 | 13 | 0.426 |
130 | 130 | 0.326 |
131 | 131 | 0.54 |
132 | 132 | 0.294 |
133 | 133 | 0.0125 |
134 | 134 | 0.838 |
135 | 135 | 0.768 |
136 | 136 | 0.449 |
137 | 137 | 0.142 |
138 | 138 | 0.381 |
139 | 139 | 0.43 |
14 | 14 | 0.398 |
140 | 140 | 0.273 |
141 | 141 | 0.225 |
142 | 142 | 0.28 |
143 | 143 | 0.151 |
144 | 144 | 0.693 |
145 | 145 | 0.519 |
146 | 146 | 0.0971 |
147 | 147 | 0.0527 |
148 | 148 | 0.405 |
149 | 149 | 0.338 |
15 | 15 | 0.119 |
150 | 150 | 0.621 |
151 | 151 | 0.691 |
152 | 152 | 0.6 |
153 | 153 | 0.854 |
154 | 154 | 0.914 |
155 | 155 | 0.00728 |
156 | 156 | 0.342 |
157 | 157 | 0.285 |
158 | 158 | 0.0869 |
159 | 159 | 0.172 |
16 | 16 | 0.952 |
160 | 160 | 0.571 |
161 | 161 | 0.0787 |
162 | 162 | 0.53 |
163 | 163 | 0.178 |
164 | 164 | 0.412 |
165 | 165 | 0.439 |
166 | 166 | 0.498 |
167 | 167 | 0.102 |
168 | 168 | 0.0981 |
169 | 169 | 0.565 |
17 | 17 | 0.797 |
18 | 18 | 0.713 |
19 | 19 | 0.524 |
2 | 2 | 0.793 |
20 | 20 | 0.511 |
21 | 21 | 0.798 |
22 | 22 | 0.778 |
23 | 23 | 0.382 |
24 | 24 | 0.671 |
25 | 25 | 0.0268 |
26 | 26 | 0.382 |
27 | 27 | 0.21 |
28 | 28 | 0.423 |
29 | 29 | 0.0537 |
3 | 3 | 0.0607 |
30 | 30 | 0.326 |
31 | 31 | 0.714 |
32 | 32 | 0.248 |
33 | 33 | 0.444 |
34 | 34 | 0.909 |
35 | 35 | 0.153 |
36 | 36 | 0.0256 |
37 | 37 | 0.123 |
38 | 38 | 0.495 |
39 | 39 | 0.341 |
4 | 4 | 0.689 |
40 | 40 | 0.218 |
41 | 41 | 0.169 |
42 | 42 | 0.134 |
43 | 43 | 0.199 |
44 | 44 | 0.389 |
45 | 45 | 0.966 |
46 | 46 | 0.209 |
47 | 47 | 0.0772 |
48 | 48 | 0.167 |
49 | 49 | 0.134 |
5 | 5 | 0.443 |
50 | 50 | 0.975 |
51 | 51 | 0.513 |
52 | 52 | 0.371 |
53 | 53 | 0.474 |
54 | 54 | 0.813 |
55 | 55 | 0.119 |
56 | 56 | 0.791 |
57 | 57 | 0.492 |
58 | 58 | 0.025 |
59 | 59 | 0.381 |
6 | 6 | 0.655 |
60 | 60 | 0.752 |
61 | 61 | 0.0285 |
62 | 62 | 0.037 |
63 | 63 | 0.837 |
64 | 64 | 0.415 |
65 | 65 | 0.956 |
66 | 66 | 0.861 |
67 | 67 | 0.278 |
68 | 68 | 0.882 |
69 | 69 | 0.874 |
7 | 7 | 0.153 |
70 | 70 | 0.258 |
71 | 71 | 0.0478 |
72 | 72 | 0.0204 |
73 | 73 | 0.638 |
74 | 74 | 0.602 |
75 | 75 | 0.0044 |
76 | 76 | 0.0387 |
77 | 77 | 0.469 |
78 | 78 | 0.126 |
79 | 79 | 0.446 |
8 | 8 | 0.855 |
80 | 80 | 0.00457 |
81 | 81 | 0.143 |
82 | 82 | 0.248 |
83 | 83 | 0.751 |
84 | 84 | 0.341 |
85 | 85 | 0.946 |
86 | 86 | 0.0801 |
87 | 87 | 0.107 |
88 | 88 | 0.655 |
89 | 89 | 0.809 |
9 | 9 | 0.625 |
90 | 90 | 0.0265 |
91 | 91 | 0.88 |
92 | 92 | 0.663 |
93 | 93 | 0.845 |
94 | 94 | 0.0496 |
95 | 95 | 0.00516 |
96 | 96 | 0.781 |
97 | 97 | 0.446 |
98 | 98 | 0.279 |
99 | 99 | 0.0319 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12175
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000025 CD19-positive B cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000025 (CD19-positive B cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)