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{{f5samples
{{f5samples
|id=FF:11514-119H2
|DRA_sample_Accession=CAGE@SAMD00005699
|name=Renal Glomerular Endothelial Cells, donor1
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005699
|sample_id=11514
|accession_numbers=CAGE;DRX008430;DRR009302;DRZ000727;DRZ002112;DRZ012077;DRZ013462
|rna_tube_id=119H2
|accession_numbers_RNASeq=sRNA-Seq;DRX037195;DRR041561;DRZ007203
|rna_box=119
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002113,UBERON:0002100,UBERON:0000483,UBERON:0001851,UBERON:0000479,UBERON:0000064,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0004120,UBERON:0006555,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003103,UBERON:0009569,UBERON:0000489,UBERON:0000353,UBERON:0005177,UBERON:0005172,UBERON:0010317,UBERON:0004819,UBERON:0005173,UBERON:0001285,UBERON:0000074,UBERON:0001225,UBERON:0001229,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0008987,UBERON:0007684,UBERON:0000916
|rna_position=H2
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000666,CL:1000746,CL:1000497,CL:0002518,CL:0002681,CL:1000449,CL:0002584,CL:1000612,CL:0002188
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=lot:5952
|rna_catalog_number=SC4005
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=kidney
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=9.8
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=endothelial cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=1.39
|sample_note=
|profile_hcage=CNhs12074,LSID838,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10012,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000115,CL:0000144,CL:0000213,CL:0000215,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0000666,CL:0002078,CL:0002188,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000058,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000074,UBERON:0000080,UBERON:0000083,UBERON:0000119,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000489,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001008,UBERON:0001062,UBERON:0001225,UBERON:0001229,UBERON:0001230,UBERON:0001285,UBERON:0001851,UBERON:0002050,UBERON:0002100,UBERON:0002113,UBERON:0002120,UBERON:0002417,UBERON:0002532,UBERON:0002553,UBERON:0003060,UBERON:0003064,UBERON:0003074,UBERON:0003081,UBERON:0003103,UBERON:0003104,UBERON:0003220,UBERON:0003886,UBERON:0003887,UBERON:0003914,UBERON:0003918,UBERON:0004111,UBERON:0004120,UBERON:0004198,UBERON:0004199,UBERON:0004208,UBERON:0004209,UBERON:0004819,UBERON:0004875,UBERON:0004876,UBERON:0005095,UBERON:0005103,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005256,UBERON:0005291,UBERON:0005423,UBERON:0005721,UBERON:0005749,UBERON:0005754,UBERON:0006553,UBERON:0006554,UBERON:0006555,UBERON:0007684,UBERON:0007687,UBERON:0009142,UBERON:0009201
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000153
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!2.79!797.27!SOX18;;chr8:10588010..10588030,-!p1@SOX7!2.02!104.63!SOX7;;chr8:55370487..55370503,+!p1@SOX17!1.87!73.93!SOX17;;chr21:39870339..39870443,-!p1@ERG!1.67!45.49!ERG;;chr19:46801639..46801699,+!p1@HIF3A!1.59!37.53!HIF3A;;chr2:177053386..177053402,+!p1@HOXD1!1.59!37.53!HOXD1;;chr10:94449703..94449718,+!p1@HHEX!1.50!113.73!HHEX;;chr17:6926362..6926377,+!p1@BCL6B!1.47!28.43!BCL6B;;chr12:96588368..96588394,+!p3@ELK3!1.46!72.79!ELK3;;chr5:71803177..71803255,-!p1@ZNF366!1.43!26.16!ZNF366;;chr17:46675558..46675577,-!p2@HOXB6!1.40!23.88!HOXB6;;chr17:46688334..46688385,-!p1@HOXB7!1.38!32.98!HOXB7;;chr19:13213511..13213545,-!p2@LYL1!1.38!25.02!LYL1;;chr9:124991204..124991246,-!p1@LHX6!1.38!22.75!LHX6;;chr17:46682321..46682362,-!p1@HOXB6!1.33!20.47!HOXB6;;chr17:46690839..46690884,-!p1@HOXB8!1.33!20.47!HOXB8;;chr19:13213399..13213414,-!p6@LYL1!1.31!19.33!LYL1;;chr6:34204921..34204939,+!p3@HMGA1!1.21!446.97!HMGA1;;chr3:128206762..128206781,-!p2@GATA2!1.17!84.16!GATA2;;chr2:176994408..176994492,+!p1@HOXD8!1.17!13.65!HOXD8;;chr20:590944..590960,-!p1@TCF15!1.17!13.65!TCF15;;chr2:46524537..46524553,+!p1@EPAS1!1.16!1302.25!EPAS1;;chr17:46691732..46691766,-!p4@HOXB8!1.05!10.24!HOXB8;;chr7:27196267..27196311,-!p1@HOXA7!1.05!10.24!HOXA7;;chr20:42295745..42295765,+!p1@MYBL2!1.02!158.09!MYBL2;;chr20:42543441..42543497,+!p1@TOX2!1.02!43.22!TOX2;;chr15:96873984..96873999,+!p3@NR2F2!1.01!69.38!NR2F2;;chr2:46602901..46602926,+!p7@EPAS1!1.01!12.51!EPAS1;;chr15:37392576..37392589,-!p12@MEIS2!1.01!11.37!MEIS2;;chr17:46675586..46675600,-!p6@HOXB6!1.00!9.10!HOXB6;;chr2:176994919..176994931,+!p2@HOXD8!1.00!9.10!HOXD8;;chr4:299227..299272,-!p1@ZNF732!1.00!9.10!ZNF732;;chr1:23885981..23886002,-!p1@ID3!0.99!1572.93!ID3;;chr17:46675420..46675465,-!p3@HOXB6!0.99!10.24!HOXB6;;chr15:37390850..37390909,-!p3@MEIS2!0.98!17.06!MEIS2;;chr20:50721803..50721857,-!p2@ZFP64!0.98!13.65!ZFP64;;chr20:42543506..42543549,+!p2@TOX2!0.97!20.47!TOX2;;chr19:13213662..13213686,-!p1@LYL1!0.97!12.51!LYL1;;chr2:46602879..46602899,+!p8@EPAS1!0.97!10.24!EPAS1;;chr18:53068911..53068935,-!p4@TCF4!0.95!9.10!TCF4;;chr17:1959369..1959388,+!p2@HIC1!0.93!20.47!HIC1;;chr15:37392616..37392638,-!p2@MEIS2!0.90!22.75!MEIS2;;chr6:21597765..21597779,+!p2@SOX4!0.89!56.87!SOX4;;chr1:221052776..221052799,+!p1@HLX!0.89!12.51!HLX;;chr19:46800289..46800327,+!p2@HIF3A!0.89!6.82!HIF3A;;chr1:6479968..6479986,-!p1@HES2!0.89!6.82!HES2;;chr20:62680671..62680679,-!p2@SOX18!0.89!6.82!SOX18;;chr17:46655672..46655697,-!p3@HOXB4!0.89!6.82!HOXB4;;chr2:176987441..176987454,+!p1@HOXD9!0.89!6.82!HOXD9;;chr2:177001290..177001315,+!p1@HOXD3!0.89!6.82!HOXD3;;chr2:46524897..46524911,+!p2@EPAS1!0.88!19.33!EPAS1;;chr13:72441315..72441454,-!p1@DACH1!0.88!13.65!DACH1;;chr15:96874012..96874042,+!p2@NR2F2!0.85!58.00!NR2F2;;chr12:2986206..2986258,-!p2@FOXM1!0.85!38.67!FOXM1;;chr10:94449675..94449694,+!p2@HHEX!0.85!17.06!HHEX;;chr2:5832508..5832524,+!p1@SOX11!0.83!5.69!SOX11;;chr7:27205136..27205164,-!p1@HOXA9!0.83!5.69!HOXA9;;chr15:37391614..37391626,-!p18@MEIS2!0.83!5.69!MEIS2;;chr17:46675469..46675481,-!p4@HOXB6!0.83!5.69!HOXB6;;chr17:46688310..46688323,-!p4@HOXB7!0.83!5.69!HOXB7;;chr17:6926381..6926392,+!p2@BCL6B!0.83!5.69!BCL6B;;chr19:13213465..13213478,-!p7@LYL1!0.83!5.69!LYL1;;chr19:13213555..13213568,-!p5@LYL1!0.83!5.69!LYL1;;chr5:176738887..176738934,-!p1@MXD3!0.82!39.81!MXD3;;chr17:46687959..46688007,-!p2@HOXB7!0.82!7.96!HOXB7;;chr19:49865646..49865718,-!p1@TEAD2!0.80!48.91!TEAD2;;chr9:130954041..130954121,-!p2@CIZ1!0.80!25.02!CIZ1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.79!406.03!TAX1BP3;;chr20:31350184..31350200,+!p1@DNMT3B!0.79!11.37!DNMT3B;;chr12:3068501..3068515,+!p4@TEAD4!0.78!9.10!TEAD4;;chr12:3068544..3068597,+!p1@TEAD4!0.77!31.85!TEAD4;;chr19:1652555..1652568,-!p2@TCF3!0.77!21.61!TCF3;;chr15:96873921..96873946,+!p1@NR2F2!0.76!148.99!NR2F2;;chr17:41623009..41623053,-!p4@ETV4!0.76!7.96!ETV4;;chr7:149470641..149470694,-!p1@ZNF467!0.75!22.75!ZNF467;;chr18:22932080..22932170,-!p1@ZNF521!0.75!21.61!ZNF521;;chr19:45908292..45908374,-!p1@PPP1R13L!0.74!44.36!PPP1R13L;;chr13:41240717..41240735,-!p2@FOXO1!0.74!34.12!FOXO1;;chr15:96876966..96877017,+!p12@NR2F2!0.74!6.82!NR2F2;;chr1:156470494..156470505,-!p3@MEF2D!0.74!6.82!MEF2D;;chr16:86544113..86544145,+!p1@FOXF1!0.74!5.69!FOXF1;;chr11:65429891..65429915,-!p7@RELA!0.74!4.55!RELA;;chrY:21906594..21906622,-!p1@KDM5D!0.74!4.55!KDM5D;;chr1:200008734..200008765,+!p2@NR5A2!0.74!4.55!NR5A2;;chr1:47696918..47696935,-!p6@TAL1!0.74!4.55!TAL1;;chr20:42602000..42602034,+!p5@TOX2!0.74!4.55!TOX2;;chr20:50721788..50721799,-!p8@ZFP64!0.74!4.55!ZFP64;;chr7:27205106..27205134,-!p2@HOXA9!0.74!4.55!HOXA9;;chr8:55370720..55370733,+!p2@SOX17!0.74!4.55!SOX17;;chr1:221053049..221053075,+!p3@HLX!0.73!7.96!HLX;;chr17:46622070..46622109,-!p1@HOXB2!0.72!10.24!HOXB2;;chr2:85360499..85360598,+!p1@TCF7L1!0.71!26.16!TCF7L1;;chr1:935467..935484,-!p1@HES4!0.69!19.33!HES4;;chr5:321810..321877,+!p1@AHRR!0.69!13.65!AHRR;;chr17:41623692..41623715,-!p1@ETV4!0.68!18.20!ETV4;;chr12:3069037..3069119,+!p2@TEAD4!0.68!14.79!TEAD4;;chr10:8096631..8096660,+!p1@GATA3!0.67!4.55!GATA3;;chrX:129244454..129244488,-!p1@ELF4!0.66!29.57!ELF4;;chr2:46524878..46524891,+!p3@EPAS1!0.66!6.82!EPAS1;;chr1:156470323..156470332,-!p4@MEF2D!0.66!5.69!MEF2D;;chr17:4890695..4890773,-!p2@CAMTA2!0.65!12.51!CAMTA2;;chr15:96874244..96874259,+!p5@NR2F2!0.64!9.10!NR2F2;;chr20:2673383..2673441,+!p1@EBF4!0.64!5.69!EBF4;;chr1:47697881..47697910,-!p4@TAL1!0.64!3.41!TAL1;;chr17:46675344..46675355,-!p9@HOXB6!0.64!3.41!HOXB6;;chr17:46675539..46675551,-!p7@HOXB6!0.64!3.41!HOXB6;;chr18:53068893..53068902,-!p28@TCF4!0.64!3.41!TCF4;;chr19:35454968..35454984,-!p3@ZNF792!0.64!3.41!ZNF792;;chr6:21597687..21597708,+!p14@SOX4!0.64!3.41!SOX4;;chrX:107018836..107018862,-!p8@TSC22D3!0.64!3.41!TSC22D3;;chr12:3068979..3068993,+!p11@TEAD4!0.64!3.41!TEAD4;;chr13:72441506..72441562,-!p3@DACH1!0.64!3.41!DACH1;;chr14:74256787..74256858,-!p6@C14orf43!0.64!3.41!C14orf43;;chr16:86600426..86600441,+!p1@FOXC2!0.63!9.10!FOXC2;;chr20:62462566..62462631,-!p1@ZBTB46!0.63!6.82!ZBTB46;;chr11:47236489..47236567,+!p2@DDB2!0.62!52.32!DDB2;;chr11:128563948..128564003,+!p1@FLI1!0.62!45.49!FLI1;;chr2:85981222..85981259,+!p2@ATOH8!0.62!5.69!ATOH8;;chr19:44123734..44123796,-!p1@ZNF428!0.61!138.75!ZNF428;;chr6:21593973..21593988,+!p1@SOX4!0.61!134.21!SOX4;;chr6:44233252..44233296,-!p1@NFKBIE!0.61!36.39!NFKBIE;;chr18:77160282..77160343,+!p2@NFATC1!0.61!22.75!NFATC1;;chr15:90544532..90544563,+!p1@ZNF710!0.61!6.82!ZNF710;;chr19:6424783..6424802,-!p2@KHSRP!0.60!73.93!KHSRP;;chr6:31126291..31126399,+!p1@TCF19!0.60!34.12!TCF19;;chr16:1429627..1429662,-!p2@UNKL!0.60!10.24!UNKL;;chr12:66218255..66218304,+!p3@HMGA2!0.60!9.10!HMGA2;;chr15:37392724..37392757,-!p1@MEIS2!0.59!15.92!MEIS2;;chr2:74375081..74375092,-!p2@BOLA3!0.59!6.82!BOLA3;;chr8:80679993..80680011,-!p1@HEY1!0.59!4.55!HEY1;;chr6:126070769..126070801,+!p1@HEY2!0.59!3.41!HEY2;;chr1:23886132..23886156,-!p2@ID3!0.59!3.41!ID3;;chr19:15543565..15543579,-!p2@WIZ!0.58!14.79!WIZ;;chrX:129244885..129244926,-!p3@ELF4!0.58!7.96!ELF4;;chr11:61520075..61520136,+!p1@C11orf9!0.58!6.82!C11orf9;;chr10:94449649..94449664,+!p3@HHEX!0.58!4.55!HHEX;;chr1:8926441..8926473,-!p10@ENO1!0.58!4.55!ENO1;;chr1:221052994..221053008,+!p6@HLX!0.58!3.41!HLX;;chr10:8095593..8095625,+!p3@GATA3!0.58!3.41!GATA3;;chr3:18466660..18466676,-!p5@SATB1!0.58!3.41!SATB1;;chr6:34204672..34204692,+!p1@HMGA1!0.57!379.87!HMGA1;;chr2:74375058..74375069,-!p3@BOLA3!0.57!5.69!BOLA3;;chr3:185826814..185826825,-!p3@ETV5!0.57!5.69!ETV5;;chr17:46622114..46622138,-!p4@HOXB2!0.57!4.55!HOXB2;;chr1:221052840..221052875,+!p4@HLX!0.57!3.41!HLX;;chr20:30193083..30193098,+!p1@ID1!0.56!268.41!ID1;;chr17:1958388..1958404,+!p1@HIC1!0.56!20.47!HIC1;;chr7:148892629..148892651,+!p2@ZNF282!0.56!19.33!ZNF282;;chr11:62521614..62521646,-!p1@ZBTB3!0.55!15.92!ZBTB3;;chr8:106330656..106330684,+!p1@ZFPM2!0.55!7.96!ZFPM2;;chr19:35455110..35455149,-!p1@ZNF792!0.55!5.69!ZNF792;;chr17:42297092..42297112,-!p11@UBTF!0.55!4.55!UBTF;;chr6:21597431..21597447,+!p8@SOX4!0.55!3.41!SOX4;;chr11:45202580..45202606,+!p@chr11:45202580..45202606,+!0.55!3.41!PRDM11;;chr12:80083544..80083558,-!p13@PAWR!0.55!3.41!PAWR;;chr17:46126136..46126152,+!p1@NFE2L1!0.54!163.78!NFE2L1;;chr19:57106647..57106686,+!p1@ZNF71!0.54!20.47!ZNF71;;chr1:204042233..204042249,+!p1@SOX13!0.54!19.33!SOX13;;chr9:14314131..14314147,-!p2@NFIB!0.54!17.06!NFIB;;chr1:151032922..151032951,+!p2@MLLT11!0.54!4.55!MLLT11;;chr2:85980951..85981004,+!p1@ATOH8!0.54!4.55!ATOH8;;chr12:66218443..66218461,+!p8@HMGA2!0.54!3.41!HMGA2;;chr20:50179368..50179392,-!p2@NFATC2!0.54!3.41!NFATC2;;chr10:77161504..77161530,-!p1@ZNF503!0.53!40.94!ZNF503;;chr11:62369108..62369183,-!p3@MTA2!0.53!39.81!MTA2;;chr7:26191809..26191890,+!p1@NFE2L3!0.53!14.79!NFE2L3;;chr7:150076406..150076456,+!p1@ZNF775!0.53!13.65!ZNF775;;chr22:41697497..41697515,+!p2@ZC3H7B!0.53!7.96!ZC3H7B;;chr19:56632858..56632903,-!p2@ZNF787!0.53!6.82!ZNF787;;chr1:204042723..204042784,+!p3@SOX13!0.53!4.55!SOX13;;chr17:79885633..79885645,-!p4@MAFG!0.53!4.55!MAFG;;chr14:105886290..105886299,+!p5@MTA1!0.53!3.41!MTA1;;chr2:46612334..46612349,+!p6@EPAS1!0.53!3.41!EPAS1;;chr5:131826457..131826514,-!p1@IRF1!0.52!117.15!IRF1;;chr17:61920023..61920110,-!p1@SMARCD2!0.52!42.08!SMARCD2;;chr1:8877692..8877732,-!p1@RERE!0.52!23.88!RERE;;chr11:62368696..62368759,-!p4@MTA2!0.52!18.20!MTA2;;chr19:36545291..36545314,-!p2@THAP8!0.52!6.82!THAP8;;chr13:37494365..37494381,-!p1@SMAD9!0.52!4.55!SMAD9;;chr12:54394059..54394088,+!p3@HOXC9!0.52!2.27!HOXC9;;chr12:57504069..57504090,-!p7@STAT6!0.52!2.27!STAT6;;chr12:66218469..66218477,+!p16@HMGA2!0.52!2.27!HMGA2;;chr12:80084018..80084035,-!p17@PAWR!0.52!2.27!PAWR;;chr13:37494275..37494304,-!p2@SMAD9!0.52!2.27!SMAD9;;chr13:72440772..72440847,-!p5@DACH1!0.52!2.27!DACH1;;chr13:72441074..72441172,-!p2@DACH1!0.52!2.27!DACH1;;chr16:86601052..86601066,+!p4@FOXC2!0.52!2.27!FOXC2;;chr16:86612320..86612394,+!p1@FOXL1!0.52!2.27!FOXL1;;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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000115;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000213;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002078;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002188;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002518;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002584;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:1000746;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000353;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001008;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002113;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004875;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004876;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0009201
|ffid_belonging_in_development=CL:0000222
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 43:
|fonse_treatment=
|fonse_treatment=
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|rna_box=119
|rna_catalog_number=SC4005
|rna_concentration=1.39
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=lot:5952
|rna_od260/230=
|rna_od260/280=
|rna_position=H2
|rna_rin=9.8
|rna_sample_type=total RNA
|rna_tube_id=119H2
|rna_weight_ug=10
|rnaseq_library_id=SRhi10012.CCGTCC
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=endothelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.19120353941453e-230!GO:0005737;cytoplasm;1.66378741494882e-177!GO:0043226;organelle;2.36087772443603e-143!GO:0043229;intracellular organelle;3.79165056011575e-143!GO:0043231;intracellular membrane-bound organelle;8.27422671578556e-141!GO:0043227;membrane-bound organelle;1.7565116434349e-140!GO:0044444;cytoplasmic part;3.11252669397605e-136!GO:0044422;organelle part;3.93370969427695e-117!GO:0044446;intracellular organelle part;4.3839205916523e-116!GO:0032991;macromolecular complex;4.17176015450923e-72!GO:0005515;protein binding;7.93257955115275e-71!GO:0005739;mitochondrion;8.81395089840655e-70!GO:0044237;cellular metabolic process;1.00509654723648e-61!GO:0030529;ribonucleoprotein complex;2.28079811872465e-61!GO:0044238;primary metabolic process;4.52268171371942e-61!GO:0043170;macromolecule metabolic process;2.57418047996141e-52!GO:0043233;organelle lumen;8.41966127647333e-51!GO:0031974;membrane-enclosed lumen;8.41966127647333e-51!GO:0031090;organelle membrane;2.74804959459606e-50!GO:0019538;protein metabolic process;2.41183371553634e-48!GO:0044429;mitochondrial part;8.73473349646842e-47!GO:0003723;RNA binding;7.76346660435924e-45!GO:0005840;ribosome;8.39265631427357e-44!GO:0044260;cellular macromolecule metabolic process;8.74201475415775e-43!GO:0044267;cellular protein metabolic process;1.98399113236169e-42!GO:0044428;nuclear part;7.1983247475033e-42!GO:0003735;structural constituent of ribosome;2.91986411064204e-40!GO:0016043;cellular component organization and biogenesis;3.04759809707097e-38!GO:0031967;organelle envelope;3.64635991360054e-38!GO:0006412;translation;3.72600619665091e-38!GO:0031975;envelope;7.60016652165367e-38!GO:0043234;protein complex;1.8045678288795e-37!GO:0005634;nucleus;5.70360921912367e-37!GO:0009058;biosynthetic process;1.1745333929331e-36!GO:0005829;cytosol;2.72371866499999e-35!GO:0033279;ribosomal subunit;2.78178436283009e-35!GO:0044249;cellular biosynthetic process;5.99256303514059e-35!GO:0005740;mitochondrial envelope;3.91466182042906e-33!GO:0009059;macromolecule biosynthetic process;1.53897706522293e-31!GO:0031966;mitochondrial membrane;2.03315811843447e-31!GO:0015031;protein transport;1.8771552207728e-30!GO:0019866;organelle inner membrane;1.95498676116717e-29!GO:0006996;organelle organization and biogenesis;2.59755286787441e-29!GO:0033036;macromolecule localization;2.63686130154793e-29!GO:0045184;establishment of protein localization;2.27825100605362e-28!GO:0008104;protein localization;6.51534521670382e-28!GO:0005743;mitochondrial inner membrane;7.88327279226782e-28!GO:0006396;RNA processing;3.3641070805212e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.28218783248705e-26!GO:0031981;nuclear lumen;3.99983757429218e-26!GO:0043228;non-membrane-bound organelle;4.42348552845142e-26!GO:0043232;intracellular non-membrane-bound organelle;4.42348552845142e-26!GO:0046907;intracellular transport;7.52851656467029e-26!GO:0065003;macromolecular complex assembly;1.08716024213293e-24!GO:0043283;biopolymer metabolic process;4.6469368165923e-23!GO:0022607;cellular component assembly;2.63798782820914e-22!GO:0044445;cytosolic part;3.78579779247071e-22!GO:0016071;mRNA metabolic process;9.29726251456607e-22!GO:0006886;intracellular protein transport;1.0024645683427e-21!GO:0008380;RNA splicing;1.9248120704108e-20!GO:0006119;oxidative phosphorylation;5.08006056438697e-20!GO:0044455;mitochondrial membrane part;2.39968248358046e-19!GO:0006259;DNA metabolic process;4.31271743096701e-19!GO:0005783;endoplasmic reticulum;4.96135525671593e-19!GO:0006397;mRNA processing;6.24169240955714e-19!GO:0015934;large ribosomal subunit;3.20694823051888e-18!GO:0012505;endomembrane system;3.68173409635293e-18!GO:0015935;small ribosomal subunit;4.51624541854e-18!GO:0000166;nucleotide binding;9.95973394860991e-18!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.25472525186632e-17!GO:0031980;mitochondrial lumen;5.20050781574149e-17!GO:0005759;mitochondrial matrix;5.20050781574149e-17!GO:0051649;establishment of cellular localization;5.20050781574149e-17!GO:0007049;cell cycle;5.20050781574149e-17!GO:0051641;cellular localization;5.63045720883995e-17!GO:0005746;mitochondrial respiratory chain;8.81125924512843e-17!GO:0044432;endoplasmic reticulum part;3.40055085719469e-16!GO:0005654;nucleoplasm;8.5799372404209e-16!GO:0043412;biopolymer modification;9.6646716537899e-16!GO:0051186;cofactor metabolic process;1.05046935539614e-15!GO:0010467;gene expression;2.19191842661987e-15!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.6764445368135e-15!GO:0005794;Golgi apparatus;2.81703887135935e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.14123997318317e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;3.492161301391e-15!GO:0016462;pyrophosphatase activity;3.492161301391e-15!GO:0050136;NADH dehydrogenase (quinone) activity;7.17030884841237e-15!GO:0003954;NADH dehydrogenase activity;7.17030884841237e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.17030884841237e-15!GO:0006464;protein modification process;8.12848029170588e-15!GO:0048770;pigment granule;9.98080320306742e-15!GO:0042470;melanosome;9.98080320306742e-15!GO:0017111;nucleoside-triphosphatase activity;1.08924273929848e-14!GO:0016874;ligase activity;1.18502654058393e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.24003358707245e-14!GO:0005681;spliceosome;4.00338492903888e-14!GO:0006457;protein folding;5.6150038417768e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.92943295263706e-14!GO:0008134;transcription factor binding;1.37437344544456e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.15123905270175e-13!GO:0044451;nucleoplasm part;3.08353706110703e-13!GO:0032553;ribonucleotide binding;3.33447134736892e-13!GO:0032555;purine ribonucleotide binding;3.33447134736892e-13!GO:0006512;ubiquitin cycle;3.95792586125348e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.36273911992944e-13!GO:0006605;protein targeting;5.7003426881589e-13!GO:0042775;organelle ATP synthesis coupled electron transport;5.7003426881589e-13!GO:0042773;ATP synthesis coupled electron transport;5.7003426881589e-13!GO:0000278;mitotic cell cycle;6.53790064528762e-13!GO:0022402;cell cycle process;6.6725435247423e-13!GO:0030964;NADH dehydrogenase complex (quinone);7.4296951581853e-13!GO:0045271;respiratory chain complex I;7.4296951581853e-13!GO:0005747;mitochondrial respiratory chain complex I;7.4296951581853e-13!GO:0044265;cellular macromolecule catabolic process;7.57373628981969e-13!GO:0017076;purine nucleotide binding;9.0117225865805e-13!GO:0044248;cellular catabolic process;1.74837297305263e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.37647504406903e-12!GO:0043687;post-translational protein modification;2.57245921971877e-12!GO:0000502;proteasome complex (sensu Eukaryota);4.16304948220387e-12!GO:0005761;mitochondrial ribosome;4.90544510828303e-12!GO:0000313;organellar ribosome;4.90544510828303e-12!GO:0006732;coenzyme metabolic process;7.48729156441327e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.17377110877698e-11!GO:0012501;programmed cell death;1.96482391277574e-11!GO:0009055;electron carrier activity;1.98290132263804e-11!GO:0009057;macromolecule catabolic process;2.15367981318773e-11!GO:0005789;endoplasmic reticulum membrane;2.18128496820222e-11!GO:0006915;apoptosis;2.52589267425662e-11!GO:0016192;vesicle-mediated transport;5.83177047904153e-11!GO:0043285;biopolymer catabolic process;8.25117867026781e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;1.59995108352366e-10!GO:0051082;unfolded protein binding;2.09047678902156e-10!GO:0022618;protein-RNA complex assembly;2.13565396391215e-10!GO:0019941;modification-dependent protein catabolic process;2.26444393984886e-10!GO:0043632;modification-dependent macromolecule catabolic process;2.26444393984886e-10!GO:0044257;cellular protein catabolic process;2.2911551430152e-10!GO:0005730;nucleolus;2.4846727872999e-10!GO:0032559;adenyl ribonucleotide binding;3.03754733281093e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;3.29770435791836e-10!GO:0005524;ATP binding;4.04473428938186e-10!GO:0006511;ubiquitin-dependent protein catabolic process;4.36792869504747e-10!GO:0008219;cell death;5.98581907776987e-10!GO:0016265;death;5.98581907776987e-10!GO:0030554;adenyl nucleotide binding;1.09603701614319e-09!GO:0051276;chromosome organization and biogenesis;1.13579909160192e-09!GO:0005793;ER-Golgi intermediate compartment;1.34433436466512e-09!GO:0044427;chromosomal part;1.48515281958317e-09!GO:0006323;DNA packaging;1.81395720262184e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;3.22802749206898e-09!GO:0000375;RNA splicing, via transesterification reactions;3.22802749206898e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.22802749206898e-09!GO:0030163;protein catabolic process;4.42599911379862e-09!GO:0003712;transcription cofactor activity;5.26817121619604e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.74080296260764e-09!GO:0006333;chromatin assembly or disassembly;6.9572861807163e-09!GO:0051188;cofactor biosynthetic process;6.9572861807163e-09!GO:0048193;Golgi vesicle transport;6.9572861807163e-09!GO:0005694;chromosome;6.96001229247243e-09!GO:0000785;chromatin;8.07000915830199e-09!GO:0008639;small protein conjugating enzyme activity;8.9646071863879e-09!GO:0022403;cell cycle phase;8.9646071863879e-09!GO:0006461;protein complex assembly;1.1407975220641e-08!GO:0008135;translation factor activity, nucleic acid binding;1.17924805747096e-08!GO:0051726;regulation of cell cycle;1.24364803037524e-08!GO:0006974;response to DNA damage stimulus;1.55758565003626e-08!GO:0004842;ubiquitin-protein ligase activity;1.56718277765301e-08!GO:0009150;purine ribonucleotide metabolic process;1.82510974952527e-08!GO:0007067;mitosis;2.0055149072045e-08!GO:0000074;regulation of progression through cell cycle;2.23448987710165e-08!GO:0000087;M phase of mitotic cell cycle;2.23946747378937e-08!GO:0006163;purine nucleotide metabolic process;2.31880249917413e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.6341468393455e-08!GO:0006793;phosphorus metabolic process;2.85559422621968e-08!GO:0006796;phosphate metabolic process;2.85559422621968e-08!GO:0016740;transferase activity;4.06655334846727e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.23778810045004e-08!GO:0009259;ribonucleotide metabolic process;5.23400852503914e-08!GO:0019787;small conjugating protein ligase activity;5.44613254933765e-08!GO:0016491;oxidoreductase activity;5.59944314354899e-08!GO:0009117;nucleotide metabolic process;5.73260683162148e-08!GO:0009056;catabolic process;7.84596519359751e-08!GO:0009152;purine ribonucleotide biosynthetic process;8.0678714458611e-08!GO:0017038;protein import;9.0000918296216e-08!GO:0005773;vacuole;9.50077939777096e-08!GO:0006164;purine nucleotide biosynthetic process;1.06474592654329e-07!GO:0016310;phosphorylation;1.21033278565307e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.58226075019304e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.64858510706857e-07!GO:0009141;nucleoside triphosphate metabolic process;1.68353266013174e-07!GO:0006913;nucleocytoplasmic transport;1.85998789347289e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.87513092958699e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.35634732744293e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.39233671887149e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.42674664932618e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.42674664932618e-07!GO:0048523;negative regulation of cellular process;2.60857476725287e-07!GO:0042623;ATPase activity, coupled;2.70729264194652e-07!GO:0009260;ribonucleotide biosynthetic process;3.00837025281087e-07!GO:0051169;nuclear transport;3.13836867048953e-07!GO:0031497;chromatin assembly;3.63645154604621e-07!GO:0016604;nuclear body;3.63645154604621e-07!GO:0005788;endoplasmic reticulum lumen;3.97436517682374e-07!GO:0016881;acid-amino acid ligase activity;4.09567882693697e-07!GO:0005768;endosome;4.1323618459036e-07!GO:0007005;mitochondrion organization and biogenesis;4.16130818726757e-07!GO:0009142;nucleoside triphosphate biosynthetic process;4.6066478110665e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.6066478110665e-07!GO:0031988;membrane-bound vesicle;4.80922640259376e-07!GO:0005635;nuclear envelope;4.98351994056495e-07!GO:0006334;nucleosome assembly;5.83061952161382e-07!GO:0043067;regulation of programmed cell death;6.52393526890082e-07!GO:0042981;regulation of apoptosis;6.81596248040272e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.14011788303727e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.14011788303727e-07!GO:0003924;GTPase activity;7.81504999091518e-07!GO:0015986;ATP synthesis coupled proton transport;7.83967319393469e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.83967319393469e-07!GO:0006446;regulation of translational initiation;8.15662022179298e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.31822515177513e-07!GO:0065004;protein-DNA complex assembly;8.9062130033072e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.19223922442234e-07!GO:0016887;ATPase activity;9.63590964573133e-07!GO:0030036;actin cytoskeleton organization and biogenesis;1.02196851897517e-06!GO:0009719;response to endogenous stimulus;1.02502798975738e-06!GO:0044431;Golgi apparatus part;1.02949690403872e-06!GO:0006413;translational initiation;1.09963371310666e-06!GO:0009060;aerobic respiration;1.11366523159096e-06!GO:0003743;translation initiation factor activity;1.21386880839285e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.30400675657966e-06!GO:0031252;leading edge;1.32015899344899e-06!GO:0009108;coenzyme biosynthetic process;1.36851539447812e-06!GO:0051301;cell division;1.38874876721319e-06!GO:0042254;ribosome biogenesis and assembly;1.42858037192272e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.47124686188239e-06!GO:0000323;lytic vacuole;1.73676811106214e-06!GO:0005764;lysosome;1.73676811106214e-06!GO:0019829;cation-transporting ATPase activity;1.92021720075847e-06!GO:0006260;DNA replication;1.92820757887934e-06!GO:0044453;nuclear membrane part;2.00646132084028e-06!GO:0046034;ATP metabolic process;2.20063961015561e-06!GO:0006281;DNA repair;2.25114786648184e-06!GO:0016787;hydrolase activity;2.37434366404256e-06!GO:0008565;protein transporter activity;3.03900376595752e-06!GO:0048519;negative regulation of biological process;3.10385127092735e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.29959904357055e-06!GO:0000279;M phase;4.58756745248027e-06!GO:0043069;negative regulation of programmed cell death;4.58756745248027e-06!GO:0031410;cytoplasmic vesicle;4.75438914606833e-06!GO:0016469;proton-transporting two-sector ATPase complex;5.0038734658568e-06!GO:0031965;nuclear membrane;5.22043881300646e-06!GO:0015630;microtubule cytoskeleton;5.30030616073602e-06!GO:0031982;vesicle;5.4680443575337e-06!GO:0006754;ATP biosynthetic process;5.96751752373062e-06!GO:0006753;nucleoside phosphate metabolic process;5.96751752373062e-06!GO:0043066;negative regulation of apoptosis;6.07180012487842e-06!GO:0006091;generation of precursor metabolites and energy;6.51631012430419e-06!GO:0045259;proton-transporting ATP synthase complex;6.65863145963606e-06!GO:0030029;actin filament-based process;6.70873015512712e-06!GO:0006916;anti-apoptosis;7.89076457896502e-06!GO:0019899;enzyme binding;8.98141767983959e-06!GO:0006366;transcription from RNA polymerase II promoter;1.01559098758221e-05!GO:0006399;tRNA metabolic process;1.03096236093472e-05!GO:0045333;cellular respiration;1.05588708331329e-05!GO:0005770;late endosome;1.15302176791951e-05!GO:0051329;interphase of mitotic cell cycle;1.28223868880114e-05!GO:0005762;mitochondrial large ribosomal subunit;1.42593766280028e-05!GO:0000315;organellar large ribosomal subunit;1.42593766280028e-05!GO:0006099;tricarboxylic acid cycle;1.5247108537389e-05!GO:0046356;acetyl-CoA catabolic process;1.5247108537389e-05!GO:0051246;regulation of protein metabolic process;1.59284824543644e-05!GO:0016568;chromatin modification;1.6554323648515e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.91293208430953e-05!GO:0006084;acetyl-CoA metabolic process;2.31846279257729e-05!GO:0065002;intracellular protein transport across a membrane;2.3990657599142e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.52206163635042e-05!GO:0005525;GTP binding;2.56802488675007e-05!GO:0030120;vesicle coat;2.61913116496046e-05!GO:0030662;coated vesicle membrane;2.61913116496046e-05!GO:0032446;protein modification by small protein conjugation;2.76126674869169e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.76642330426598e-05!GO:0004812;aminoacyl-tRNA ligase activity;2.76642330426598e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.76642330426598e-05!GO:0000139;Golgi membrane;3.15480480905352e-05!GO:0016567;protein ubiquitination;3.18774982253433e-05!GO:0003714;transcription corepressor activity;3.74657202381848e-05!GO:0016044;membrane organization and biogenesis;3.74657202381848e-05!GO:0004298;threonine endopeptidase activity;3.9261300182226e-05!GO:0051325;interphase;4.12501428981029e-05!GO:0051187;cofactor catabolic process;4.4914263869756e-05!GO:0007264;small GTPase mediated signal transduction;4.72527031359671e-05!GO:0045786;negative regulation of progression through cell cycle;4.83595854484591e-05!GO:0005667;transcription factor complex;6.86491615642822e-05!GO:0005905;coated pit;6.86491615642822e-05!GO:0007010;cytoskeleton organization and biogenesis;7.05747506194115e-05!GO:0003676;nucleic acid binding;7.80720057541074e-05!GO:0042802;identical protein binding;7.81099092577914e-05!GO:0044262;cellular carbohydrate metabolic process;7.81099092577914e-05!GO:0043038;amino acid activation;7.94663984850402e-05!GO:0006418;tRNA aminoacylation for protein translation;7.94663984850402e-05!GO:0043039;tRNA aminoacylation;7.94663984850402e-05!GO:0006606;protein import into nucleus;8.88124224289752e-05!GO:0048475;coated membrane;8.9690762951117e-05!GO:0030117;membrane coat;8.9690762951117e-05!GO:0044440;endosomal part;9.01563998482974e-05!GO:0010008;endosome membrane;9.01563998482974e-05!GO:0006364;rRNA processing;9.10429987047886e-05!GO:0016607;nuclear speck;0.000102676192294109!GO:0009109;coenzyme catabolic process;0.000108626192451605!GO:0019843;rRNA binding;0.000108958881556215!GO:0051170;nuclear import;0.000115939755673813!GO:0045454;cell redox homeostasis;0.000117318736847922!GO:0016779;nucleotidyltransferase activity;0.000123588674311879!GO:0007243;protein kinase cascade;0.000126586371568344!GO:0019867;outer membrane;0.000130995162203801!GO:0031968;organelle outer membrane;0.000138056773243631!GO:0006752;group transfer coenzyme metabolic process;0.00014246774312211!GO:0009165;nucleotide biosynthetic process;0.000145764716465913!GO:0008654;phospholipid biosynthetic process;0.000148323262237499!GO:0016072;rRNA metabolic process;0.000168010423585425!GO:0005643;nuclear pore;0.000170447826906928!GO:0008632;apoptotic program;0.00018764282628195!GO:0000786;nucleosome;0.000190010006059797!GO:0065009;regulation of a molecular function;0.000205045919948386!GO:0033116;ER-Golgi intermediate compartment membrane;0.000205925068518812!GO:0032561;guanyl ribonucleotide binding;0.000206687692968672!GO:0019001;guanyl nucleotide binding;0.000206687692968672!GO:0000151;ubiquitin ligase complex;0.00020723130429394!GO:0016564;transcription repressor activity;0.000219464151860893!GO:0005813;centrosome;0.000230553802496017!GO:0000245;spliceosome assembly;0.000240208221883206!GO:0016853;isomerase activity;0.00027480927717565!GO:0008047;enzyme activator activity;0.000277041464272021!GO:0005769;early endosome;0.000291778601659488!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000293167727936933!GO:0015399;primary active transmembrane transporter activity;0.000293167727936933!GO:0001558;regulation of cell growth;0.00032515737529706!GO:0048522;positive regulation of cellular process;0.00033655248620342!GO:0046930;pore complex;0.000365555774288655!GO:0003697;single-stranded DNA binding;0.00037219015265623!GO:0005741;mitochondrial outer membrane;0.000387244518210838!GO:0030867;rough endoplasmic reticulum membrane;0.000425100060328972!GO:0005815;microtubule organizing center;0.000538837874719211!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000561457348785471!GO:0043623;cellular protein complex assembly;0.000570431920326013!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000620892885580133!GO:0016049;cell growth;0.000673481349005657!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000680294106283084!GO:0008361;regulation of cell size;0.000733787686114421!GO:0005048;signal sequence binding;0.000772755458545505!GO:0007040;lysosome organization and biogenesis;0.000832826392035101!GO:0003713;transcription coactivator activity;0.000845079460349336!GO:0007265;Ras protein signal transduction;0.000861447828806964!GO:0050794;regulation of cellular process;0.000899660701895988!GO:0030133;transport vesicle;0.000934992543415055!GO:0008092;cytoskeletal protein binding;0.00101822337060617!GO:0008026;ATP-dependent helicase activity;0.00116577066921415!GO:0043492;ATPase activity, coupled to movement of substances;0.00123530558217439!GO:0008250;oligosaccharyl transferase complex;0.00127472904272863!GO:0004386;helicase activity;0.00133137195893586!GO:0003899;DNA-directed RNA polymerase activity;0.00135459546444891!GO:0000314;organellar small ribosomal subunit;0.00136149085122172!GO:0005763;mitochondrial small ribosomal subunit;0.00136149085122172!GO:0005774;vacuolar membrane;0.00137286833230685!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00141166034099063!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00141526034817094!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00159155696256164!GO:0016563;transcription activator activity;0.00166355851283232!GO:0006818;hydrogen transport;0.00168821831672441!GO:0015992;proton transport;0.00169251679135219!GO:0051427;hormone receptor binding;0.00172526093288594!GO:0006897;endocytosis;0.00176643303419306!GO:0010324;membrane invagination;0.00176643303419306!GO:0016070;RNA metabolic process;0.00176643303419306!GO:0043681;protein import into mitochondrion;0.0017878709619824!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0017878709619824!GO:0015002;heme-copper terminal oxidase activity;0.0017878709619824!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0017878709619824!GO:0004129;cytochrome-c oxidase activity;0.0017878709619824!GO:0030176;integral to endoplasmic reticulum membrane;0.00179611167574286!GO:0007242;intracellular signaling cascade;0.00179611167574286!GO:0016859;cis-trans isomerase activity;0.00192884933062144!GO:0005798;Golgi-associated vesicle;0.001986240908308!GO:0007033;vacuole organization and biogenesis;0.00204308107429713!GO:0016301;kinase activity;0.0021147703532161!GO:0006626;protein targeting to mitochondrion;0.0021912952902889!GO:0007006;mitochondrial membrane organization and biogenesis;0.00219131604956528!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00227568549969869!GO:0009967;positive regulation of signal transduction;0.00237390655276361!GO:0005684;U2-dependent spliceosome;0.00238071534381953!GO:0015980;energy derivation by oxidation of organic compounds;0.0023838378154355!GO:0051920;peroxiredoxin activity;0.0024181387591496!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00254067244304793!GO:0006839;mitochondrial transport;0.00257974634983689!GO:0051087;chaperone binding;0.00259599555588967!GO:0018196;peptidyl-asparagine modification;0.00259599555588967!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00259599555588967!GO:0030132;clathrin coat of coated pit;0.00280750561646907!GO:0016126;sterol biosynthetic process;0.00281421745313244!GO:0006740;NADPH regeneration;0.00287466812122381!GO:0006098;pentose-phosphate shunt;0.00287466812122381!GO:0031902;late endosome membrane;0.00290093817219052!GO:0005819;spindle;0.00303650883360466!GO:0035257;nuclear hormone receptor binding;0.00303650883360466!GO:0030027;lamellipodium;0.00305922353628751!GO:0040008;regulation of growth;0.00308714303532052!GO:0048471;perinuclear region of cytoplasm;0.00308714303532052!GO:0030041;actin filament polymerization;0.00313182238254298!GO:0044437;vacuolar part;0.00314695880479211!GO:0006778;porphyrin metabolic process;0.00314779093983456!GO:0033013;tetrapyrrole metabolic process;0.00314779093983456!GO:0005096;GTPase activator activity;0.00315532402945197!GO:0022890;inorganic cation transmembrane transporter activity;0.00315532402945197!GO:0006950;response to stress;0.00315532402945197!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00316693784269384!GO:0043566;structure-specific DNA binding;0.00320109295027048!GO:0004576;oligosaccharyl transferase activity;0.0032618098551485!GO:0004674;protein serine/threonine kinase activity;0.00326255592882206!GO:0051348;negative regulation of transferase activity;0.00354185935852048!GO:0006613;cotranslational protein targeting to membrane;0.00355836629864381!GO:0005885;Arp2/3 protein complex;0.00375749182875382!GO:0050790;regulation of catalytic activity;0.00380795935303338!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00394719581722861!GO:0006979;response to oxidative stress;0.00400270711688568!GO:0033673;negative regulation of kinase activity;0.0040043280662231!GO:0006469;negative regulation of protein kinase activity;0.0040043280662231!GO:0005765;lysosomal membrane;0.00411216548466524!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00435170783582567!GO:0008610;lipid biosynthetic process;0.0044690105238702!GO:0043488;regulation of mRNA stability;0.00453847653316314!GO:0043487;regulation of RNA stability;0.00453847653316314!GO:0017166;vinculin binding;0.0046929568756036!GO:0051789;response to protein stimulus;0.00478837142798547!GO:0006986;response to unfolded protein;0.00478837142798547!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00489503344302!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00489503344302!GO:0043021;ribonucleoprotein binding;0.00501650878591079!GO:0001568;blood vessel development;0.00502984277728028!GO:0001726;ruffle;0.00528794131612764!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00573079286607477!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00573079286607477!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00573079286607477!GO:0006695;cholesterol biosynthetic process;0.00573079286607477!GO:0001944;vasculature development;0.00580114059300505!GO:0005874;microtubule;0.00602988988053927!GO:0046474;glycerophospholipid biosynthetic process;0.00612810331325078!GO:0031324;negative regulation of cellular metabolic process;0.00625708495237595!GO:0005791;rough endoplasmic reticulum;0.00643137388750338!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00643137388750338!GO:0000082;G1/S transition of mitotic cell cycle;0.00664190790219659!GO:0030308;negative regulation of cell growth;0.00674457982565765!GO:0003684;damaged DNA binding;0.00675624748203315!GO:0007266;Rho protein signal transduction;0.00701957185993492!GO:0008154;actin polymerization and/or depolymerization;0.0071618893369322!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00717089732167496!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00745373882818188!GO:0006509;membrane protein ectodomain proteolysis;0.00754489525828538!GO:0033619;membrane protein proteolysis;0.00754489525828538!GO:0006779;porphyrin biosynthetic process;0.00779635713207829!GO:0033014;tetrapyrrole biosynthetic process;0.00779635713207829!GO:0045792;negative regulation of cell size;0.00810060346714207!GO:0006118;electron transport;0.00828514797887853!GO:0042168;heme metabolic process;0.00828960531067587!GO:0048487;beta-tubulin binding;0.00913521270639485!GO:0030880;RNA polymerase complex;0.00936307283653459!GO:0008637;apoptotic mitochondrial changes;0.00970561422259391!GO:0030145;manganese ion binding;0.0097697019910552!GO:0048518;positive regulation of biological process;0.0100112447674121!GO:0043281;regulation of caspase activity;0.0102321145731906!GO:0051287;NAD binding;0.0106326728985345!GO:0030658;transport vesicle membrane;0.0108814030689863!GO:0045926;negative regulation of growth;0.0108814030689863!GO:0043086;negative regulation of catalytic activity;0.0108814030689863!GO:0050657;nucleic acid transport;0.0110612554524732!GO:0051236;establishment of RNA localization;0.0110612554524732!GO:0050658;RNA transport;0.0110612554524732!GO:0006733;oxidoreduction coenzyme metabolic process;0.0111216664657533!GO:0006082;organic acid metabolic process;0.0111718614187397!GO:0008139;nuclear localization sequence binding;0.0115630252159797!GO:0006403;RNA localization;0.011597382684573!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.011649966971069!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0117725159907421!GO:0003724;RNA helicase activity;0.0120998626164137!GO:0006414;translational elongation;0.0121403990087838!GO:0000118;histone deacetylase complex;0.0125213557589511!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0126504728044429!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0130500095217554!GO:0009966;regulation of signal transduction;0.0132020812333317!GO:0019752;carboxylic acid metabolic process;0.0132020812333317!GO:0016272;prefoldin complex;0.0132740304302306!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0142823442798259!GO:0006739;NADP metabolic process;0.0147149798442472!GO:0005083;small GTPase regulator activity;0.0147990268372179!GO:0009892;negative regulation of metabolic process;0.0150481680855127!GO:0030659;cytoplasmic vesicle membrane;0.0153601037505156!GO:0006790;sulfur metabolic process;0.0155354551002907!GO:0003756;protein disulfide isomerase activity;0.0158215245308622!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0158215245308622!GO:0050789;regulation of biological process;0.0169115975371627!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0169741407204999!GO:0006458;'de novo' protein folding;0.0169903270155158!GO:0051084;'de novo' posttranslational protein folding;0.0169903270155158!GO:0006612;protein targeting to membrane;0.0179147456870958!GO:0046467;membrane lipid biosynthetic process;0.0180155839700599!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0180256696475878!GO:0003729;mRNA binding;0.0180485589017733!GO:0030118;clathrin coat;0.0182764961947574!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0182764961947574!GO:0031072;heat shock protein binding;0.0182764961947574!GO:0048660;regulation of smooth muscle cell proliferation;0.018597638072634!GO:0043433;negative regulation of transcription factor activity;0.0187581459483946!GO:0046489;phosphoinositide biosynthetic process;0.0188398802924893!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0188398802924893!GO:0005637;nuclear inner membrane;0.0192261431594463!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0194640699210959!GO:0000428;DNA-directed RNA polymerase complex;0.0194640699210959!GO:0051252;regulation of RNA metabolic process;0.0195020607398266!GO:0033559;unsaturated fatty acid metabolic process;0.0195451940503651!GO:0006636;unsaturated fatty acid biosynthetic process;0.0195451940503651!GO:0016125;sterol metabolic process;0.0197019206896379!GO:0006783;heme biosynthetic process;0.0198310536045618!GO:0005657;replication fork;0.0202548218308115!GO:0006807;nitrogen compound metabolic process;0.021091187713575!GO:0006650;glycerophospholipid metabolic process;0.0212376352519104!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0220426469492548!GO:0006066;alcohol metabolic process;0.0225353710120677!GO:0030660;Golgi-associated vesicle membrane;0.0228147069051082!GO:0048514;blood vessel morphogenesis;0.0237637492084163!GO:0031272;regulation of pseudopodium formation;0.0237637492084163!GO:0031269;pseudopodium formation;0.0237637492084163!GO:0031344;regulation of cell projection organization and biogenesis;0.0237637492084163!GO:0031268;pseudopodium organization and biogenesis;0.0237637492084163!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0237637492084163!GO:0031274;positive regulation of pseudopodium formation;0.0237637492084163!GO:0030125;clathrin vesicle coat;0.0237801535257865!GO:0030665;clathrin coated vesicle membrane;0.0237801535257865!GO:0007162;negative regulation of cell adhesion;0.0238092533703896!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0241741033511854!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0243001342767271!GO:0030031;cell projection biogenesis;0.0245038103158516!GO:0005975;carbohydrate metabolic process;0.0245038103158516!GO:0007050;cell cycle arrest;0.0245038103158516!GO:0004860;protein kinase inhibitor activity;0.0248356665451209!GO:0019318;hexose metabolic process;0.0251394671965854!GO:0035035;histone acetyltransferase binding;0.025587334060076!GO:0046822;regulation of nucleocytoplasmic transport;0.025587334060076!GO:0007088;regulation of mitosis;0.0259627555994934!GO:0001836;release of cytochrome c from mitochondria;0.0259627555994934!GO:0006595;polyamine metabolic process;0.0260575252030876!GO:0046483;heterocycle metabolic process;0.026220805730759!GO:0001953;negative regulation of cell-matrix adhesion;0.0264940363017928!GO:0043284;biopolymer biosynthetic process;0.0264940363017928!GO:0050662;coenzyme binding;0.0266408229195125!GO:0004177;aminopeptidase activity;0.0270640297643121!GO:0005100;Rho GTPase activator activity;0.0270640297643121!GO:0030833;regulation of actin filament polymerization;0.0270810399130001!GO:0022415;viral reproductive process;0.0274357029822542!GO:0015631;tubulin binding;0.0276123060900948!GO:0030032;lamellipodium biogenesis;0.0280263185148208!GO:0006289;nucleotide-excision repair;0.0281556802178414!GO:0030134;ER to Golgi transport vesicle;0.0281792368980645!GO:0008538;proteasome activator activity;0.0287255854950381!GO:0015036;disulfide oxidoreductase activity;0.0291926965854139!GO:0005996;monosaccharide metabolic process;0.0296154594675717!GO:0001525;angiogenesis;0.0296154594675717!GO:0040029;regulation of gene expression, epigenetic;0.0296988063007069!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0310070297015875!GO:0006402;mRNA catabolic process;0.0312364593880699!GO:0005862;muscle thin filament tropomyosin;0.0315690457613067!GO:0048468;cell development;0.0315925162770885!GO:0007346;regulation of progression through mitotic cell cycle;0.032219185983997!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0324239352676225!GO:0000287;magnesium ion binding;0.0326435466926556!GO:0050178;phenylpyruvate tautomerase activity;0.0327519167018768!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.032766416031828!GO:0032507;maintenance of cellular protein localization;0.0328759670667187!GO:0000059;protein import into nucleus, docking;0.0329546902724385!GO:0051336;regulation of hydrolase activity;0.0329925695449547!GO:0008186;RNA-dependent ATPase activity;0.0333676932795195!GO:0051235;maintenance of localization;0.0333676932795195!GO:0006007;glucose catabolic process;0.0343550936981908!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0347631160693745!GO:0010257;NADH dehydrogenase complex assembly;0.0347631160693745!GO:0033108;mitochondrial respiratory chain complex assembly;0.0347631160693745!GO:0022408;negative regulation of cell-cell adhesion;0.0348429845331127!GO:0006919;caspase activation;0.0349908341719327!GO:0000096;sulfur amino acid metabolic process;0.0364854329748995!GO:0031901;early endosome membrane;0.0364854329748995!GO:0008033;tRNA processing;0.0371415231416798!GO:0006520;amino acid metabolic process;0.0371511616718692!GO:0030695;GTPase regulator activity;0.03716433593028!GO:0016363;nuclear matrix;0.0372283675587454!GO:0007021;tubulin folding;0.0377497655061487!GO:0031301;integral to organelle membrane;0.0377497655061487!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0380394777387569!GO:0006268;DNA unwinding during replication;0.0383324325752738!GO:0051085;chaperone cofactor-dependent protein folding;0.0386772352279225!GO:0045941;positive regulation of transcription;0.0392077987566687!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0392847347514031!GO:0006643;membrane lipid metabolic process;0.0395240491099287!GO:0006644;phospholipid metabolic process;0.0398982179009278!GO:0018193;peptidyl-amino acid modification;0.0399751182928705!GO:0051540;metal cluster binding;0.040193686019612!GO:0051536;iron-sulfur cluster binding;0.040193686019612!GO:0009308;amine metabolic process;0.0403793834312429!GO:0003779;actin binding;0.0404186741269773!GO:0005092;GDP-dissociation inhibitor activity;0.0407650628877812!GO:0044433;cytoplasmic vesicle part;0.0410108150916273!GO:0031529;ruffle organization and biogenesis;0.0413784137300673!GO:0045334;clathrin-coated endocytic vesicle;0.0413784137300673!GO:0006497;protein amino acid lipidation;0.0415112769056059!GO:0048659;smooth muscle cell proliferation;0.0419280302085242!GO:0008286;insulin receptor signaling pathway;0.0419965264873386!GO:0006401;RNA catabolic process;0.0423156779657828!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0432513225410112!GO:0030119;AP-type membrane coat adaptor complex;0.0432513225410112!GO:0005652;nuclear lamina;0.0433199000443436!GO:0030433;ER-associated protein catabolic process;0.0434693545594965!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0434693545594965!GO:0000209;protein polyubiquitination;0.0439362533335077!GO:0005869;dynactin complex;0.0440421361998078!GO:0035258;steroid hormone receptor binding;0.0440421361998078!GO:0000075;cell cycle checkpoint;0.0446876928608259!GO:0019206;nucleoside kinase activity;0.0447309554250371!GO:0032508;DNA duplex unwinding;0.0447879525242624!GO:0032392;DNA geometric change;0.0447879525242624!GO:0016860;intramolecular oxidoreductase activity;0.0449109629034634!GO:0006261;DNA-dependent DNA replication;0.0453160106606222!GO:0008283;cell proliferation;0.0458157332559647!GO:0030913;paranodal junction assembly;0.045978773533549!GO:0032288;myelin formation;0.045978773533549!GO:0051028;mRNA transport;0.0463007588857564!GO:0006767;water-soluble vitamin metabolic process;0.0463007588857564!GO:0030127;COPII vesicle coat;0.0477331619017457!GO:0012507;ER to Golgi transport vesicle membrane;0.0477331619017457!GO:0051101;regulation of DNA binding;0.0485292912068752!GO:0044438;microbody part;0.0486995986745512!GO:0044439;peroxisomal part;0.0486995986745512!GO:0045185;maintenance of protein localization;0.0488320914863612!GO:0006012;galactose metabolic process;0.0493043780082417!GO:0008629;induction of apoptosis by intracellular signals;0.0497473355150661!GO:0046979;TAP2 binding;0.0497473355150661!GO:0046977;TAP binding;0.0497473355150661!GO:0046978;TAP1 binding;0.0497473355150661!GO:0016481;negative regulation of transcription;0.0498803175254405
|sample_id=11514
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=kidney
|top_motifs=RXR{A,B,G}:1.76848416628;SOX{8,9,10}:1.68348352819;ZNF423:1.49257809688;ESRRA:1.44827298935;TFAP2{A,C}:1.33525819773;TLX1..3_NFIC{dimer}:1.31816353692;NR5A1,2:1.29852041472;TFAP4:1.17453389722;XCPE1{core}:1.14598914802;HES1:1.08329425393;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.0629287884;RXRA_VDR{dimer}:1.01427191007;ZNF148:0.9802079665;EBF1:0.979408884077;AR:0.914536514686;PAX1,9:0.829738077958;ZNF238:0.798794381463;TP53:0.794947133003;FOXL1:0.793432622689;LEF1_TCF7_TCF7L1,2:0.778458225258;FOX{I1,J2}:0.777961937757;ZBTB6:0.769993296908;HIC1:0.744260751132;GTF2A1,2:0.733206745964;PAX6:0.710982600395;REST:0.699504571017;PPARG:0.690526833031;GATA6:0.687607923283;HAND1,2:0.67876654725;ARID5B:0.651013556991;IKZF1:0.643031779873;GZF1:0.638504177365;ETS1,2:0.599594612501;POU6F1:0.586355296222;SOX5:0.580842334066;SMAD1..7,9:0.576519148335;TFAP2B:0.556302124075;ZIC1..3:0.553879351712;NFATC1..3:0.534629308584;MYOD1:0.526826715133;IKZF2:0.517957158005;TAL1_TCF{3,4,12}:0.51216736237;LMO2:0.495038857143;FOXQ1:0.481839943787;PBX1:0.434613274971;TFCP2:0.430129194128;SOX2:0.429455816663;HNF4A_NR2F1,2:0.394790544069;SP1:0.392709797657;bHLH_family:0.338887535252;STAT2,4,6:0.306225395634;CRX:0.28710621516;GCM1,2:0.277519733127;GFI1B:0.275907735083;PAX5:0.265065272496;HOX{A5,B5}:0.251404520126;FOSL2:0.236142821975;PAX8:0.234106589352;TBP:0.233509035347;RORA:0.22994957183;SPIB:0.221608195528;TEAD1:0.214199838147;SPZ1:0.213700706351;NANOG:0.199927616631;NFE2:0.179498968291;LHX3,4:0.167264927202;GFI1:0.166225055524;POU2F1..3:0.129542915929;NFY{A,B,C}:0.125324948247;ESR1:0.119343688621;ADNP_IRX_SIX_ZHX:0.0728564854001;UFEwm:0.0705838188881;HBP1_HMGB_SSRP1_UBTF:0.0561004285876;HOX{A6,A7,B6,B7}:0.0279297960737;FOXM1:0.016340143989;NFKB1_REL_RELA:0.00456072729798;POU1F1:0.00386843506326;ONECUT1,2:-0.00238604428519;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.00581835419813;NR1H4:-0.00832431495515;MED-1{core}:-0.00857097834255;BACH2:-0.00981408167878;HMX1:-0.0113306075334;EP300:-0.021015476965;NFE2L1:-0.0234238418867;NKX2-3_NKX2-5:-0.0279472534509;NKX2-2,8:-0.0313879187514;HNF1A:-0.0351757730082;SPI1:-0.0544630638939;MTE{core}:-0.0586695405224;MYB:-0.0671344170231;ZFP161:-0.0696795694874;ALX1:-0.0754870829419;MEF2{A,B,C,D}:-0.0922253338245;SOX17:-0.0973436693595;FOS_FOS{B,L1}_JUN{B,D}:-0.123895275012;STAT5{A,B}:-0.130227383524;RREB1:-0.151965231882;NR6A1:-0.166387538953;GTF2I:-0.169060974782;MTF1:-0.182480550605;TFDP1:-0.19713387731;NFE2L2:-0.205961988681;NR3C1:-0.225017027621;SRF:-0.238470426092;E2F1..5:-0.242432509766;FOX{D1,D2}:-0.258278080662;SNAI1..3:-0.262408271419;KLF4:-0.28435251107;SREBF1,2:-0.292525910052;VSX1,2:-0.29710352096;FOXA2:-0.300186075422;GLI1..3:-0.323725330424;ATF6:-0.339023388152;PATZ1:-0.368645376599;FOX{F1,F2,J1}:-0.369617258139;CUX2:-0.386215197172;HLF:-0.400594496605;ELF1,2,4:-0.40190254212;MAZ:-0.408263379288;EGR1..3:-0.414599990749;ZNF143:-0.415372068057;XBP1:-0.415512710748;RFX1:-0.427144614383;NANOG{mouse}:-0.444477032293;IRF1,2:-0.456817722835;PITX1..3:-0.457662065096;FOXP3:-0.466227583077;CEBPA,B_DDIT3:-0.490308616953;RUNX1..3:-0.493964358655;ZEB1:-0.494309590879;NHLH1,2:-0.501585295786;PAX2:-0.508963438364;OCT4_SOX2{dimer}:-0.523705661717;RBPJ:-0.527950746977;PRRX1,2:-0.529550822009;JUN:-0.554107332224;TEF:-0.579295702448;POU3F1..4:-0.584488601968;MZF1:-0.604911098528;PAX3,7:-0.622474024459;MYBL2:-0.659631011045;NFIX:-0.666405788327;DMAP1_NCOR{1,2}_SMARC:-0.673895165486;YY1:-0.721546462444;POU5F1:-0.746683740399;TOPORS:-0.760680902889;TGIF1:-0.780235305553;NKX3-2:-0.783138415899;HOXA9_MEIS1:-0.789046867228;MYFfamily:-0.815067443117;T:-0.839404917814;FOXO1,3,4:-0.852692062115;NFIL3:-0.874019152629;ALX4:-0.918063427358;GATA4:-0.918564943589;CDC5L:-0.922791049419;NRF1:-0.942344441915;IRF7:-0.95809318614;EN1,2:-0.959760269765;DBP:-0.990738677786;PRDM1:-1.02918179679;BPTF:-1.03330410378;STAT1,3:-1.05768246375;TBX4,5:-1.05896128092;ATF2:-1.07257602877;ATF4:-1.12069198152;BREu{core}:-1.14738537712;FOXP1:-1.15312405787;MAFB:-1.16309919871;CREB1:-1.18698948649;HIF1A:-1.23909705365;HOX{A4,D4}:-1.25795883366;ATF5_CREB3:-1.31777386387;AHR_ARNT_ARNT2:-1.34298473709;NKX3-1:-1.34424258461;FOXD3:-1.34961857379;TLX2:-1.39505986072;CDX1,2,4:-1.44858199033;HSF1,2:-1.46709801831;NKX6-1,2:-1.53754371926;PDX1:-1.54092840359;PAX4:-1.55573639099;AIRE:-1.55828860885;ZNF384:-1.56325724756;EVI1:-1.58902095067;HMGA1,2:-1.61910289023;ZBTB16:-1.67729653539;RFX2..5_RFXANK_RFXAP:-1.88230365082;FOXN1:-1.88489856735;NKX2-1,4:-1.95279492184;ELK1,4_GABP{A,B1}:-1.97565352876
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11514-119H2;search_select_hide=table117:FF:11514-119H2
}}
}}

Latest revision as of 18:05, 4 June 2020

Name:Renal Glomerular Endothelial Cells, donor1
Species:Human (Homo sapiens)
Library ID:CNhs12074
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuekidney
dev stageNA
sexNA
ageNA
cell typeendothelial cell
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberlot:5952
catalog numberSC4005
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005699
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12074 CAGE DRX008430 DRR009302
Accession ID Hg19

Library idBAMCTSS
CNhs12074 DRZ000727 DRZ002112
Accession ID Hg38

Library idBAMCTSS
CNhs12074 DRZ012077 DRZ013462
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005699
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10012.CCGTCC sRNA-Seq DRX037195 DRR041561
Accession ID Hg19

Library idBAMCTSS
SRhi10012.CCGTCC DRZ007203


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.107
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.12
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen1.305
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.515
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.00187
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.433
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.208
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0273
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.674
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.468
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.33
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.515
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12074

Jaspar motifP-value
MA0002.20.391
MA0003.10.195
MA0004.10.436
MA0006.10.213
MA0007.10.0557
MA0009.10.983
MA0014.10.858
MA0017.10.0424
MA0018.20.00172
MA0019.10.172
MA0024.10.0741
MA0025.10.395
MA0027.10.482
MA0028.16.96783e-4
MA0029.10.373
MA0030.10.311
MA0031.10.131
MA0035.28.81939e-4
MA0038.10.246
MA0039.20.509
MA0040.10.198
MA0041.10.207
MA0042.10.656
MA0043.15.14762e-5
MA0046.10.0249
MA0047.20.16
MA0048.10.806
MA0050.10.132
MA0051.10.452
MA0052.10.0679
MA0055.10.393
MA0057.10.249
MA0058.10.353
MA0059.10.625
MA0060.10.0396
MA0061.10.397
MA0062.28.75993e-6
MA0065.20.0227
MA0066.10.167
MA0067.10.131
MA0068.10.207
MA0069.10.353
MA0070.10.37
MA0071.10.0474
MA0072.10.331
MA0073.10.614
MA0074.10.203
MA0076.17.8585e-6
MA0077.13.05838e-4
MA0078.10.0135
MA0079.20.311
MA0080.20.0809
MA0081.10.965
MA0083.10.808
MA0084.10.8
MA0087.10.426
MA0088.10.803
MA0090.10.219
MA0091.10.192
MA0092.10.437
MA0093.10.433
MA0099.20.00108
MA0100.10.2
MA0101.10.257
MA0102.25.51132e-4
MA0103.10.176
MA0104.20.484
MA0105.10.547
MA0106.10.0166
MA0107.10.153
MA0108.20.00343
MA0111.10.876
MA0112.20.0321
MA0113.10.15
MA0114.10.206
MA0115.10.751
MA0116.10.461
MA0117.10.14
MA0119.10.0864
MA0122.10.176
MA0124.10.695
MA0125.10.989
MA0131.10.239
MA0135.10.123
MA0136.10.232
MA0137.20.0875
MA0138.20.0492
MA0139.10.249
MA0140.10.0236
MA0141.10.00229
MA0142.10.926
MA0143.10.978
MA0144.10.528
MA0145.10.116
MA0146.10.0733
MA0147.10.649
MA0148.10.0362
MA0149.10.0785
MA0150.10.356
MA0152.10.473
MA0153.10.6
MA0154.10.12
MA0155.10.0109
MA0156.10.202
MA0157.10.65
MA0159.10.0808
MA0160.10.0714
MA0162.10.0846
MA0163.10.149
MA0164.10.195
MA0258.10.0552
MA0259.10.263



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12074

Novel motifP-value
10.548
100.684
1000.728
1010.342
1020.546
1030.778
1040.393
1050.207
1060.0382
1070.0542
1080.446
1090.147
110.0357
1100.0975
1110.592
1120.359
1130.743
1140.395
1150.922
1160.711
1170.826
1180.866
1190.139
120.501
1200.428
1210.947
1220.74
1230.224
1240.591
1250.562
1260.572
1270.96
1280.157
1290.0128
130.467
1300.705
1310.0511
1320.14
1330.205
1340.82
1350.128
1360.84
1370.515
1380.713
1390.243
140.817
1400.711
1410.139
1420.535
1430.00404
1440.332
1450.161
1460.101
1470.304
1480.691
1490.0184
150.34
1500.23
1510.446
1520.0264
1530.259
1540.383
1550.633
1560.116
1570.555
1580.698
1590.805
160.57
1600.00247
1610.751
1620.465
1630.825
1640.887
1650.286
1660.245
1670.165
1680.419
1690.031
170.122
180.318
190.072
20.22
200.718
210.858
220.0818
230.0494
240.749
250.745
260.0868
270.146
280.416
290.852
30.519
300.449
310.434
320.196
330.327
340.0839
350.686
360.161
370.234
380.172
390.231
40.168
400.00775
410.0744
420.807
430.292
440.26
450.169
460.0796
470.449
480.091
490.366
50.633
500.559
510.292
520.503
530.955
540.489
550.981
560.503
570.421
580.821
590.0118
60.206
600.205
610.973
620.804
630.329
640.0875
650.0186
660.585
670.805
680.0562
690.142
70.643
700.145
710.392
720.637
730.0204
740.858
750.337
760.355
770.0365
780.729
790.00733
80.0277
800.805
810.9
820.269
830.822
840.131
850.0782
860.788
870.415
880.653
890.417
90.262
900.665
910.0638
920.385
930.719
940.455
950.0785
960.513
970.633
980.0664
990.0476



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12074


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000666 (fenestrated cell)
1000746 (glomerular cell)
1000497 (kidney cell)
0002518 (kidney epithelial cell)
0002681 (kidney cortical cell)
1000449 (epithelial cell of nephron)
0002584 (renal cortical epithelial cell)
1000612 (kidney corpuscule cell)
0002188 (glomerular endothelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002113 (kidney)
0002100 (trunk)
0000483 (epithelium)
0001851 (cortex)
0000479 (tissue)
0000064 (organ part)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0006555 (excretory tube)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003103 (compound organ)
0009569 (subdivision of trunk)
0000489 (cavitated compound organ)
0000353 (parenchyma)
0005177 (trunk region element)
0005172 (abdomen element)
0010317 (germ layer / neural crest derived structure)
0004819 (kidney epithelium)
0005173 (abdominal segment element)
0001285 (nephron)
0000074 (renal glomerulus)
0001225 (cortex of kidney)
0001229 (renal corpuscle)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0008987 (renal parenchyma)
0007684 (uriniferous tubule)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000153 (human renal glomerular endothelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)

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