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{{f5samples
{{f5samples
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Line 35: Line 42:
|fonse_treatment_closure=
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|name=CD19+ B Cells (pluriselect), donor090309, donation3
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|namespace=FANTOM5
Line 42: Line 61:
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|rna_catalog_number=
Line 57: Line 79:
|rna_weight_ug=1.61136
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Line 69: Line 92:
|sample_ethnicity=
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.83369297269426e-219!GO:0043227;membrane-bound organelle;1.55389753970638e-203!GO:0043231;intracellular membrane-bound organelle;3.33295997757904e-203!GO:0043226;organelle;1.02018085748703e-188!GO:0043229;intracellular organelle;4.34694643735913e-188!GO:0005737;cytoplasm;2.77621576236403e-129!GO:0044422;organelle part;5.2280095708082e-111!GO:0044446;intracellular organelle part;2.33404446675706e-109!GO:0005634;nucleus;1.14508740526556e-101!GO:0032991;macromolecular complex;1.66093840383381e-98!GO:0044444;cytoplasmic part;3.13098741888986e-98!GO:0044237;cellular metabolic process;2.25471935159639e-95!GO:0043170;macromolecule metabolic process;3.66470800130337e-94!GO:0044238;primary metabolic process;1.36694385974896e-90!GO:0030529;ribonucleoprotein complex;5.30576661284196e-85!GO:0003723;RNA binding;6.6144740409182e-78!GO:0044428;nuclear part;2.52493037149802e-74!GO:0043233;organelle lumen;1.06953092494883e-66!GO:0031974;membrane-enclosed lumen;1.06953092494883e-66!GO:0043283;biopolymer metabolic process;1.69238938173907e-66!GO:0010467;gene expression;3.66795318400123e-66!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.25476522489057e-61!GO:0005739;mitochondrion;8.68113469078013e-61!GO:0006396;RNA processing;2.51033677725738e-54!GO:0006412;translation;3.10796449766762e-52!GO:0043234;protein complex;3.79595569380667e-49!GO:0005840;ribosome;4.28906381314566e-49!GO:0031981;nuclear lumen;7.12192642329424e-45!GO:0003676;nucleic acid binding;1.71073844172141e-44!GO:0033036;macromolecule localization;4.17465899322581e-44!GO:0016071;mRNA metabolic process;2.32226090651627e-43!GO:0015031;protein transport;4.09423290357969e-43!GO:0005515;protein binding;9.70249956940919e-43!GO:0003735;structural constituent of ribosome;5.01613775328116e-42!GO:0045184;establishment of protein localization;9.35884430225129e-42!GO:0019538;protein metabolic process;1.08511206752459e-41!GO:0044429;mitochondrial part;1.2664231246083e-40!GO:0008104;protein localization;1.30216984662606e-40!GO:0044267;cellular protein metabolic process;2.08473885978465e-39!GO:0008380;RNA splicing;3.4046519185624e-39!GO:0031090;organelle membrane;1.05371696168229e-38!GO:0009059;macromolecule biosynthetic process;1.58571845593746e-38!GO:0044260;cellular macromolecule metabolic process;1.7150244158595e-38!GO:0033279;ribosomal subunit;9.94303777177647e-38!GO:0006397;mRNA processing;3.31166247649042e-37!GO:0031967;organelle envelope;2.06743138115094e-36!GO:0016070;RNA metabolic process;2.27491476831279e-36!GO:0031975;envelope;4.0938648881595e-36!GO:0009058;biosynthetic process;1.59441724710235e-31!GO:0044249;cellular biosynthetic process;2.48193573681988e-31!GO:0005829;cytosol;1.84031201235692e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.10115879174526e-30!GO:0005654;nucleoplasm;9.96249597972734e-30!GO:0005681;spliceosome;2.31112141529018e-29!GO:0065003;macromolecular complex assembly;8.06805184051959e-29!GO:0006259;DNA metabolic process;1.25628705864577e-28!GO:0046907;intracellular transport;2.3750281569458e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.86664428065527e-27!GO:0006886;intracellular protein transport;3.35961857035139e-27!GO:0044445;cytosolic part;2.8969920611615e-25!GO:0019866;organelle inner membrane;3.59380800308448e-25!GO:0022607;cellular component assembly;1.60537618303076e-24!GO:0005740;mitochondrial envelope;2.12140080531711e-24!GO:0044451;nucleoplasm part;8.81069577908388e-24!GO:0016043;cellular component organization and biogenesis;1.20939180008654e-23!GO:0031966;mitochondrial membrane;2.04512264545441e-23!GO:0005743;mitochondrial inner membrane;6.37965938485459e-23!GO:0006119;oxidative phosphorylation;9.50699667118411e-22!GO:0006512;ubiquitin cycle;4.14910009900629e-21!GO:0000166;nucleotide binding;1.24098701752339e-20!GO:0051649;establishment of cellular localization;5.1774549567688e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.00536159877159e-20!GO:0015935;small ribosomal subunit;9.77507610322405e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.0396573593278e-19!GO:0051641;cellular localization;1.26672470840327e-19!GO:0016462;pyrophosphatase activity;1.33832357025958e-19!GO:0044265;cellular macromolecule catabolic process;2.00695518141982e-19!GO:0016874;ligase activity;2.30971903915553e-19!GO:0017111;nucleoside-triphosphatase activity;2.38116813819449e-19!GO:0006996;organelle organization and biogenesis;2.58334860021958e-19!GO:0022618;protein-RNA complex assembly;3.04486747503475e-19!GO:0044455;mitochondrial membrane part;3.63678742825847e-19!GO:0015934;large ribosomal subunit;5.26124415122633e-19!GO:0031980;mitochondrial lumen;1.27789932362961e-18!GO:0005759;mitochondrial matrix;1.27789932362961e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;2.10186361269767e-18!GO:0019941;modification-dependent protein catabolic process;2.3857206558512e-18!GO:0043632;modification-dependent macromolecule catabolic process;2.3857206558512e-18!GO:0044257;cellular protein catabolic process;3.80832115407493e-18!GO:0006511;ubiquitin-dependent protein catabolic process;4.37775271396192e-18!GO:0043285;biopolymer catabolic process;8.79079451193593e-18!GO:0006974;response to DNA damage stimulus;9.90324214474477e-18!GO:0016604;nuclear body;1.29903868423898e-17!GO:0008134;transcription factor binding;1.30467023655962e-17!GO:0043228;non-membrane-bound organelle;7.80662419995259e-17!GO:0043232;intracellular non-membrane-bound organelle;7.80662419995259e-17!GO:0005730;nucleolus;1.18925875808514e-16!GO:0005746;mitochondrial respiratory chain;2.56604733213939e-16!GO:0006457;protein folding;4.75941553233566e-16!GO:0009057;macromolecule catabolic process;9.6357945968533e-16!GO:0006605;protein targeting;1.78779081567512e-15!GO:0006281;DNA repair;1.89963821679604e-15!GO:0043412;biopolymer modification;7.48496703873237e-15!GO:0000502;proteasome complex (sensu Eukaryota);8.89776034466503e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;1.02949747980172e-14!GO:0000375;RNA splicing, via transesterification reactions;1.02949747980172e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.02949747980172e-14!GO:0008135;translation factor activity, nucleic acid binding;1.53059546069864e-14!GO:0032553;ribonucleotide binding;1.78491780023052e-14!GO:0032555;purine ribonucleotide binding;1.78491780023052e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.79767116376438e-14!GO:0003954;NADH dehydrogenase activity;1.79767116376438e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.79767116376438e-14!GO:0016887;ATPase activity;2.44777674572473e-14!GO:0012505;endomembrane system;2.55192881236746e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.8269768235841e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.16988169523243e-14!GO:0005761;mitochondrial ribosome;4.84176014202998e-14!GO:0000313;organellar ribosome;4.84176014202998e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.15956636303954e-14!GO:0017076;purine nucleotide binding;6.1020177162772e-14!GO:0012501;programmed cell death;6.28001811918548e-14!GO:0006915;apoptosis;7.00675150128369e-14!GO:0042623;ATPase activity, coupled;7.60846942424053e-14!GO:0030163;protein catabolic process;7.85903242375959e-14!GO:0044248;cellular catabolic process;8.51198682983103e-14!GO:0016607;nuclear speck;9.60141825690255e-14!GO:0019222;regulation of metabolic process;1.88863437636016e-13!GO:0050794;regulation of cellular process;3.71968004203366e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;5.65157143183028e-13!GO:0042775;organelle ATP synthesis coupled electron transport;7.74069351617007e-13!GO:0042773;ATP synthesis coupled electron transport;7.74069351617007e-13!GO:0051276;chromosome organization and biogenesis;8.3063643815746e-13!GO:0006464;protein modification process;1.07073445644062e-12!GO:0005524;ATP binding;1.1087161638065e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.20905110958092e-12!GO:0045271;respiratory chain complex I;1.20905110958092e-12!GO:0005747;mitochondrial respiratory chain complex I;1.20905110958092e-12!GO:0005635;nuclear envelope;1.58823718098547e-12!GO:0031965;nuclear membrane;1.6859132099674e-12!GO:0006323;DNA packaging;2.13728232111792e-12!GO:0008219;cell death;2.57894848978254e-12!GO:0016265;death;2.57894848978254e-12!GO:0032559;adenyl ribonucleotide binding;3.49392292889418e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.77748956462298e-12!GO:0031323;regulation of cellular metabolic process;5.03032631873752e-12!GO:0042254;ribosome biogenesis and assembly;5.4435476643924e-12!GO:0003712;transcription cofactor activity;5.48874191472104e-12!GO:0006413;translational initiation;9.73729124310738e-12!GO:0006913;nucleocytoplasmic transport;1.6426534431957e-11!GO:0030554;adenyl nucleotide binding;1.67956753846398e-11!GO:0009719;response to endogenous stimulus;2.06314677562352e-11!GO:0008639;small protein conjugating enzyme activity;2.31093584599965e-11!GO:0043687;post-translational protein modification;2.46466876526562e-11!GO:0051169;nuclear transport;2.73389905029801e-11!GO:0006446;regulation of translational initiation;3.01051578313542e-11!GO:0005694;chromosome;3.16432845003037e-11!GO:0004842;ubiquitin-protein ligase activity;4.60714569601054e-11!GO:0003743;translation initiation factor activity;7.08960247163047e-11!GO:0051082;unfolded protein binding;1.21343756170997e-10!GO:0004386;helicase activity;1.52588929678388e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.59582046740482e-10!GO:0044453;nuclear membrane part;1.67955223278058e-10!GO:0019787;small conjugating protein ligase activity;1.82929545669608e-10!GO:0006350;transcription;1.8331244986809e-10!GO:0048770;pigment granule;4.30875065167182e-10!GO:0042470;melanosome;4.30875065167182e-10!GO:0048193;Golgi vesicle transport;4.34371720065817e-10!GO:0008026;ATP-dependent helicase activity;6.43460094642977e-10!GO:0010468;regulation of gene expression;6.71313562270454e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;7.63409263821573e-10!GO:0015078;hydrogen ion transmembrane transporter activity;9.52428091112764e-10!GO:0019829;cation-transporting ATPase activity;1.10148113160384e-09!GO:0051186;cofactor metabolic process;1.14935841310064e-09!GO:0044427;chromosomal part;1.60967517729271e-09!GO:0009259;ribonucleotide metabolic process;1.76133877121838e-09!GO:0042981;regulation of apoptosis;1.8349562794646e-09!GO:0017038;protein import;1.97092370829543e-09!GO:0016568;chromatin modification;2.03389206173693e-09!GO:0006399;tRNA metabolic process;2.06889703607278e-09!GO:0007049;cell cycle;2.1519837012204e-09!GO:0006333;chromatin assembly or disassembly;2.1519837012204e-09!GO:0043067;regulation of programmed cell death;2.40077889596904e-09!GO:0006403;RNA localization;2.63917556750814e-09!GO:0050657;nucleic acid transport;2.87930601255685e-09!GO:0051236;establishment of RNA localization;2.87930601255685e-09!GO:0050658;RNA transport;2.87930601255685e-09!GO:0008270;zinc ion binding;3.08484011881438e-09!GO:0005643;nuclear pore;3.25096502440145e-09!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.87450739639736e-09!GO:0006164;purine nucleotide biosynthetic process;3.87450739639736e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.87450739639736e-09!GO:0009260;ribonucleotide biosynthetic process;4.73346887370978e-09!GO:0006163;purine nucleotide metabolic process;4.94762603010041e-09!GO:0003713;transcription coactivator activity;4.99813239200876e-09!GO:0065004;protein-DNA complex assembly;5.53023294187228e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.38780670565577e-09!GO:0005794;Golgi apparatus;6.64365031082543e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.45175753513108e-09!GO:0016787;hydrolase activity;8.99689202628483e-09!GO:0005783;endoplasmic reticulum;1.23278488818091e-08!GO:0065002;intracellular protein transport across a membrane;1.27631634874214e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.38359954999536e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.51767454646718e-08!GO:0016072;rRNA metabolic process;1.52960284657595e-08!GO:0016881;acid-amino acid ligase activity;1.56820462844015e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.76787649819256e-08!GO:0008565;protein transporter activity;1.80500436382533e-08!GO:0006364;rRNA processing;1.8141410301181e-08!GO:0009150;purine ribonucleotide metabolic process;1.8141410301181e-08!GO:0050789;regulation of biological process;2.02094831069465e-08!GO:0044432;endoplasmic reticulum part;2.22189622995874e-08!GO:0015986;ATP synthesis coupled proton transport;2.34792945008437e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.34792945008437e-08!GO:0043566;structure-specific DNA binding;2.68092485036883e-08!GO:0006732;coenzyme metabolic process;7.08980377726922e-08!GO:0032774;RNA biosynthetic process;7.20568070983581e-08!GO:0004298;threonine endopeptidase activity;7.73157953452936e-08!GO:0046930;pore complex;7.83391778502313e-08!GO:0051028;mRNA transport;8.45320443233278e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.73631687579896e-08!GO:0006351;transcription, DNA-dependent;9.07041489587248e-08!GO:0045449;regulation of transcription;1.13620654272069e-07!GO:0000785;chromatin;1.30454867448288e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.4757792360607e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.4757792360607e-07!GO:0006754;ATP biosynthetic process;1.68273985602128e-07!GO:0006753;nucleoside phosphate metabolic process;1.68273985602128e-07!GO:0016192;vesicle-mediated transport;1.74181765486361e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.74181765486361e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.74181765486361e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.89783107767668e-07!GO:0006793;phosphorus metabolic process;2.01542706732054e-07!GO:0006796;phosphate metabolic process;2.01542706732054e-07!GO:0009056;catabolic process;2.32585464391248e-07!GO:0046914;transition metal ion binding;2.4403659570083e-07!GO:0051246;regulation of protein metabolic process;3.55499335461311e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.32487559350231e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.48704026602182e-07!GO:0000245;spliceosome assembly;4.54120052208569e-07!GO:0009141;nucleoside triphosphate metabolic process;4.83699878526344e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.17582067579987e-07!GO:0009144;purine nucleoside triphosphate metabolic process;5.17582067579987e-07!GO:0003697;single-stranded DNA binding;5.54357605116434e-07!GO:0005789;endoplasmic reticulum membrane;5.89078634749467e-07!GO:0016563;transcription activator activity;6.28289635050349e-07!GO:0032446;protein modification by small protein conjugation;6.43883444061381e-07!GO:0022402;cell cycle process;6.60231319583135e-07!GO:0000151;ubiquitin ligase complex;7.28075332566514e-07!GO:0009060;aerobic respiration;7.57178655855529e-07!GO:0046034;ATP metabolic process;8.60581200478615e-07!GO:0016310;phosphorylation;9.12812274600017e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.03789118151246e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.04490363682679e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.04490363682679e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.04490363682679e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.13303643930675e-06!GO:0006366;transcription from RNA polymerase II promoter;1.25701577413304e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.35817525055538e-06!GO:0016779;nucleotidyltransferase activity;1.55604459787405e-06!GO:0016567;protein ubiquitination;1.63992705658555e-06!GO:0006461;protein complex assembly;1.643497872035e-06!GO:0009055;electron carrier activity;1.65031374104425e-06!GO:0051726;regulation of cell cycle;1.90624981910529e-06!GO:0045259;proton-transporting ATP synthase complex;1.96459756417528e-06!GO:0006260;DNA replication;2.06350769490792e-06!GO:0000074;regulation of progression through cell cycle;2.35902200872084e-06!GO:0043038;amino acid activation;2.51851508057743e-06!GO:0006418;tRNA aminoacylation for protein translation;2.51851508057743e-06!GO:0043039;tRNA aminoacylation;2.51851508057743e-06!GO:0005768;endosome;2.61191270329589e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.67941258945504e-06!GO:0045333;cellular respiration;3.17040526247232e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.47258039224099e-06!GO:0006355;regulation of transcription, DNA-dependent;3.95690381826454e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.50562410106707e-06!GO:0015399;primary active transmembrane transporter activity;4.50562410106707e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.77607027501473e-06!GO:0051170;nuclear import;5.08541880321791e-06!GO:0009615;response to virus;5.44542363422477e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.59270467131413e-06!GO:0003724;RNA helicase activity;7.97827330384906e-06!GO:0006606;protein import into nucleus;8.89270744830608e-06!GO:0051188;cofactor biosynthetic process;9.39168653891412e-06!GO:0006401;RNA catabolic process;9.88697901218058e-06!GO:0003677;DNA binding;1.02241624908826e-05!GO:0006613;cotranslational protein targeting to membrane;1.0927862044804e-05!GO:0006099;tricarboxylic acid cycle;1.3784725435247e-05!GO:0046356;acetyl-CoA catabolic process;1.3784725435247e-05!GO:0005770;late endosome;1.44302484297372e-05!GO:0031324;negative regulation of cellular metabolic process;1.44302484297372e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.45475104790658e-05!GO:0006334;nucleosome assembly;1.492479263936e-05!GO:0019899;enzyme binding;1.52490171071744e-05!GO:0005773;vacuole;1.54554219420379e-05!GO:0005793;ER-Golgi intermediate compartment;1.60430155264698e-05!GO:0007243;protein kinase cascade;1.77730045215919e-05!GO:0031497;chromatin assembly;1.888479715773e-05!GO:0009117;nucleotide metabolic process;2.07070261596409e-05!GO:0043069;negative regulation of programmed cell death;2.19772752150808e-05!GO:0016564;transcription repressor activity;2.2317923978157e-05!GO:0007005;mitochondrion organization and biogenesis;2.44199165865441e-05!GO:0006084;acetyl-CoA metabolic process;2.44199165865441e-05!GO:0065009;regulation of a molecular function;2.6246088810642e-05!GO:0000323;lytic vacuole;2.93195732344895e-05!GO:0005764;lysosome;2.93195732344895e-05!GO:0043066;negative regulation of apoptosis;3.29178718644993e-05!GO:0051168;nuclear export;3.32692606805558e-05!GO:0065007;biological regulation;4.49229405487241e-05!GO:0006417;regulation of translation;4.53322094595294e-05!GO:0009108;coenzyme biosynthetic process;4.94566070388729e-05!GO:0006752;group transfer coenzyme metabolic process;5.42398572321907e-05!GO:0016197;endosome transport;5.47544746671424e-05!GO:0042613;MHC class II protein complex;6.04953307118391e-05!GO:0005762;mitochondrial large ribosomal subunit;6.04953307118391e-05!GO:0000315;organellar large ribosomal subunit;6.04953307118391e-05!GO:0043492;ATPase activity, coupled to movement of substances;6.77126729468206e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.85476289928435e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;7.04254414743225e-05!GO:0030120;vesicle coat;7.04254414743225e-05!GO:0030662;coated vesicle membrane;7.04254414743225e-05!GO:0016740;transferase activity;7.45097639515175e-05!GO:0006612;protein targeting to membrane;7.48882005056203e-05!GO:0009109;coenzyme catabolic process;8.04566414361352e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;8.37559415147061e-05!GO:0045786;negative regulation of progression through cell cycle;0.000102137889845204!GO:0000314;organellar small ribosomal subunit;0.000104287608656533!GO:0005763;mitochondrial small ribosomal subunit;0.000104287608656533!GO:0048475;coated membrane;0.000112705378326954!GO:0030117;membrane coat;0.000112705378326954!GO:0003690;double-stranded DNA binding;0.000119352975715119!GO:0006916;anti-apoptosis;0.000127184649599492!GO:0043065;positive regulation of apoptosis;0.000134270200507345!GO:0031072;heat shock protein binding;0.000139795313616993!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00014384046221193!GO:0008186;RNA-dependent ATPase activity;0.000150005789284609!GO:0016481;negative regulation of transcription;0.000154317901047721!GO:0006402;mRNA catabolic process;0.000154625013216351!GO:0051187;cofactor catabolic process;0.000156138711464091!GO:0006818;hydrogen transport;0.000169067217363373!GO:0015992;proton transport;0.000181228482370149!GO:0005885;Arp2/3 protein complex;0.000186033544967207!GO:0043068;positive regulation of programmed cell death;0.000192709086478291!GO:0044431;Golgi apparatus part;0.000209100729797508!GO:0043021;ribonucleoprotein binding;0.00021178297999347!GO:0005667;transcription factor complex;0.00023115963190111!GO:0003924;GTPase activity;0.000237702680281047!GO:0005813;centrosome;0.000239057930300994!GO:0006917;induction of apoptosis;0.000250559028147231!GO:0022890;inorganic cation transmembrane transporter activity;0.000262565259182806!GO:0043681;protein import into mitochondrion;0.000305197876883505!GO:0044440;endosomal part;0.000305197876883505!GO:0010008;endosome membrane;0.000305197876883505!GO:0003729;mRNA binding;0.000320041996780039!GO:0031326;regulation of cellular biosynthetic process;0.000323540241148761!GO:0008234;cysteine-type peptidase activity;0.000345145323606715!GO:0012502;induction of programmed cell death;0.000346033109419736!GO:0048523;negative regulation of cellular process;0.000348072550234678!GO:0008654;phospholipid biosynthetic process;0.000355889436703594!GO:0006261;DNA-dependent DNA replication;0.000363052531817982!GO:0005525;GTP binding;0.000363976468024128!GO:0008033;tRNA processing;0.000370144043254302!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000389465879545305!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000401124985686619!GO:0008632;apoptotic program;0.000407736701839316!GO:0000278;mitotic cell cycle;0.000443774765169703!GO:0004004;ATP-dependent RNA helicase activity;0.000453302835833738!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000483939256090075!GO:0006352;transcription initiation;0.000507959699511265!GO:0043623;cellular protein complex assembly;0.000535478602905438!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000591416384613717!GO:0009892;negative regulation of metabolic process;0.00062093346697122!GO:0016741;transferase activity, transferring one-carbon groups;0.000642097137509185!GO:0008168;methyltransferase activity;0.000651932559350943!GO:0005815;microtubule organizing center;0.000696308849475136!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000708650579642979!GO:0030384;phosphoinositide metabolic process;0.000712480537755385!GO:0004518;nuclease activity;0.000720920637717432!GO:0016251;general RNA polymerase II transcription factor activity;0.00074861034593181!GO:0006310;DNA recombination;0.000759204104461268!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000759437449937502!GO:0003714;transcription corepressor activity;0.000802329865188786!GO:0042113;B cell activation;0.000831727873665938!GO:0003899;DNA-directed RNA polymerase activity;0.000888730070380771!GO:0000786;nucleosome;0.00095510411850519!GO:0051252;regulation of RNA metabolic process;0.00111258551117616!GO:0051427;hormone receptor binding;0.0013162080105824!GO:0009165;nucleotide biosynthetic process;0.00137448280197676!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00140417801840354!GO:0015002;heme-copper terminal oxidase activity;0.00140417801840354!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00140417801840354!GO:0004129;cytochrome-c oxidase activity;0.00140417801840354!GO:0006891;intra-Golgi vesicle-mediated transport;0.00153393388839781!GO:0009889;regulation of biosynthetic process;0.00153658254119586!GO:0046489;phosphoinositide biosynthetic process;0.00162648636653685!GO:0051301;cell division;0.00183090773192046!GO:0004527;exonuclease activity;0.00191639476900297!GO:0043488;regulation of mRNA stability;0.00198568418513502!GO:0043487;regulation of RNA stability;0.00198568418513502!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00210560127212236!GO:0046474;glycerophospholipid biosynthetic process;0.00216987208085573!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00216987208085573!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00216987208085573!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00216987208085573!GO:0050790;regulation of catalytic activity;0.00224626907891941!GO:0051789;response to protein stimulus;0.00230409423567957!GO:0006986;response to unfolded protein;0.00230409423567957!GO:0006650;glycerophospholipid metabolic process;0.00234593595703126!GO:0035257;nuclear hormone receptor binding;0.00237488818144663!GO:0005774;vacuolar membrane;0.00238229057584666!GO:0032561;guanyl ribonucleotide binding;0.00238229057584666!GO:0019001;guanyl nucleotide binding;0.00238229057584666!GO:0048500;signal recognition particle;0.00240817927933926!GO:0007264;small GTPase mediated signal transduction;0.00240817927933926!GO:0044452;nucleolar part;0.00268784060830075!GO:0031902;late endosome membrane;0.00269129802632803!GO:0004674;protein serine/threonine kinase activity;0.00280475883509437!GO:0007034;vacuolar transport;0.00282209100364385!GO:0005769;early endosome;0.00299232470935836!GO:0006414;translational elongation;0.00300461034865374!GO:0005637;nuclear inner membrane;0.0032115902123225!GO:0016363;nuclear matrix;0.00331967440626756!GO:0005048;signal sequence binding;0.00338210488744462!GO:0003684;damaged DNA binding;0.00352295300042794!GO:0003711;transcription elongation regulator activity;0.00352650970521209!GO:0003725;double-stranded RNA binding;0.00359692629823204!GO:0000139;Golgi membrane;0.00366482910315333!GO:0007006;mitochondrial membrane organization and biogenesis;0.00369920309241705!GO:0006383;transcription from RNA polymerase III promoter;0.00371000506006239!GO:0033116;ER-Golgi intermediate compartment membrane;0.00375559747353252!GO:0006405;RNA export from nucleus;0.00380319710206901!GO:0048519;negative regulation of biological process;0.00382743036868967!GO:0006289;nucleotide-excision repair;0.00398733286065057!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00399625272835184!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00399625272835184!GO:0045454;cell redox homeostasis;0.00440910994697525!GO:0005684;U2-dependent spliceosome;0.00446169590835176!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00466788571199381!GO:0000087;M phase of mitotic cell cycle;0.00467079063362359!GO:0005657;replication fork;0.00473262771723799!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00475185571623861!GO:0045047;protein targeting to ER;0.00475185571623861!GO:0004532;exoribonuclease activity;0.00475185571623861!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00475185571623861!GO:0016859;cis-trans isomerase activity;0.0048100357562212!GO:0044437;vacuolar part;0.00486685459441547!GO:0003678;DNA helicase activity;0.00492168435168399!GO:0008312;7S RNA binding;0.0049923543028676!GO:0005669;transcription factor TFIID complex;0.00519534644118576!GO:0030518;steroid hormone receptor signaling pathway;0.00536401183307903!GO:0016584;nucleosome positioning;0.00536401183307903!GO:0000287;magnesium ion binding;0.00551304827487147!GO:0008408;3'-5' exonuclease activity;0.00576457129746239!GO:0051920;peroxiredoxin activity;0.00576812856912932!GO:0048471;perinuclear region of cytoplasm;0.00576812856912932!GO:0007242;intracellular signaling cascade;0.00577161618117287!GO:0006611;protein export from nucleus;0.00597664906291186!GO:0022403;cell cycle phase;0.00611039477557417!GO:0045947;negative regulation of translational initiation;0.00611502460033358!GO:0005798;Golgi-associated vesicle;0.00620492675598358!GO:0006302;double-strand break repair;0.00630230379669602!GO:0007067;mitosis;0.00630230379669602!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00633276808868212!GO:0006626;protein targeting to mitochondrion;0.00634816162948311!GO:0031252;leading edge;0.00637040030581548!GO:0042802;identical protein binding;0.0065579628255325!GO:0005765;lysosomal membrane;0.0065579628255325!GO:0016605;PML body;0.00667913712181309!GO:0030433;ER-associated protein catabolic process;0.0067300818033032!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0067300818033032!GO:0031625;ubiquitin protein ligase binding;0.00728755331240559!GO:0009967;positive regulation of signal transduction;0.00744200258525228!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00783490825595625!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00819019124453576!GO:0043087;regulation of GTPase activity;0.00833538829959586!GO:0000118;histone deacetylase complex;0.00833538829959586!GO:0046467;membrane lipid biosynthetic process;0.00844232010338563!GO:0030521;androgen receptor signaling pathway;0.00844232010338563!GO:0006950;response to stress;0.0086335984792638!GO:0007265;Ras protein signal transduction;0.00872381574146441!GO:0045892;negative regulation of transcription, DNA-dependent;0.009913481237081!GO:0051336;regulation of hydrolase activity;0.0101538129380158!GO:0006839;mitochondrial transport;0.010395903351626!GO:0006091;generation of precursor metabolites and energy;0.010810528119601!GO:0007041;lysosomal transport;0.0118421380825729!GO:0016272;prefoldin complex;0.0118421380825729!GO:0006376;mRNA splice site selection;0.0123016881248533!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0123016881248533!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0123016881248533!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0128734315102811!GO:0019882;antigen processing and presentation;0.0129275234455041!GO:0048522;positive regulation of cellular process;0.0129295711729325!GO:0004197;cysteine-type endopeptidase activity;0.0129634399471623!GO:0003746;translation elongation factor activity;0.0131339858075738!GO:0047485;protein N-terminus binding;0.0136197269194569!GO:0006672;ceramide metabolic process;0.0139778146141597!GO:0051087;chaperone binding;0.0143898663725334!GO:0016853;isomerase activity;0.0143898663725334!GO:0051539;4 iron, 4 sulfur cluster binding;0.0145842288412383!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0146359224740109!GO:0019883;antigen processing and presentation of endogenous antigen;0.0147245135133487!GO:0019783;small conjugating protein-specific protease activity;0.0154171532009265!GO:0031901;early endosome membrane;0.0154171532009265!GO:0005741;mitochondrial outer membrane;0.0159319814494675!GO:0006595;polyamine metabolic process;0.016534752261347!GO:0030137;COPI-coated vesicle;0.0167935014346226!GO:0019843;rRNA binding;0.0168143076397131!GO:0006919;caspase activation;0.0170147134512598!GO:0006284;base-excision repair;0.0178963692677968!GO:0032940;secretion by cell;0.0180546363234111!GO:0004843;ubiquitin-specific protease activity;0.0180628518776238!GO:0032200;telomere organization and biogenesis;0.0182946935174981!GO:0000723;telomere maintenance;0.0182946935174981!GO:0030663;COPI coated vesicle membrane;0.0186358347786372!GO:0030126;COPI vesicle coat;0.0186358347786372!GO:0032259;methylation;0.0189989387232046!GO:0000209;protein polyubiquitination;0.0191958358092368!GO:0000049;tRNA binding;0.0193362676199175!GO:0043022;ribosome binding;0.0193362676199175!GO:0006506;GPI anchor biosynthetic process;0.0198476821880146!GO:0032395;MHC class II receptor activity;0.0200597951354208!GO:0009116;nucleoside metabolic process;0.0200641428178525!GO:0008047;enzyme activator activity;0.0200641428178525!GO:0031968;organelle outer membrane;0.0200641428178525!GO:0030258;lipid modification;0.0204989274293362!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0210423323050825!GO:0043414;biopolymer methylation;0.0211070394161408!GO:0030658;transport vesicle membrane;0.0215150504135785!GO:0046966;thyroid hormone receptor binding;0.0216372511110174!GO:0007040;lysosome organization and biogenesis;0.0216959138520181!GO:0000178;exosome (RNase complex);0.0217306011999248!GO:0045045;secretory pathway;0.0217383799060915!GO:0043281;regulation of caspase activity;0.0218059831454325!GO:0051052;regulation of DNA metabolic process;0.0220910386436435!GO:0015631;tubulin binding;0.022161198372861!GO:0048487;beta-tubulin binding;0.0224285736439013!GO:0008094;DNA-dependent ATPase activity;0.0226360549829975!GO:0009451;RNA modification;0.022948330778217!GO:0015980;energy derivation by oxidation of organic compounds;0.0239408122606969!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0247774302952285!GO:0008097;5S rRNA binding;0.0254939101859802!GO:0006338;chromatin remodeling;0.0256050587860843!GO:0035258;steroid hormone receptor binding;0.0256522860643808!GO:0006497;protein amino acid lipidation;0.0258241714665141!GO:0000738;DNA catabolic process, exonucleolytic;0.0258352293482525!GO:0030118;clathrin coat;0.0258534420098112!GO:0046649;lymphocyte activation;0.0259297891009318!GO:0015923;mannosidase activity;0.0260266352584597!GO:0046822;regulation of nucleocytoplasmic transport;0.0261859982986131!GO:0004221;ubiquitin thiolesterase activity;0.0266415424284473!GO:0048002;antigen processing and presentation of peptide antigen;0.0272952818235659!GO:0005832;chaperonin-containing T-complex;0.0279137539500575!GO:0045730;respiratory burst;0.0279891848175628!GO:0031124;mRNA 3'-end processing;0.0281199455429039!GO:0022406;membrane docking;0.0282535518758012!GO:0048278;vesicle docking;0.0282535518758012!GO:0051059;NF-kappaB binding;0.0284912250560126!GO:0043596;nuclear replication fork;0.0287006643552246!GO:0000175;3'-5'-exoribonuclease activity;0.0290442289187133!GO:0005521;lamin binding;0.029255819513471!GO:0006607;NLS-bearing substrate import into nucleus;0.0298886322160739!GO:0050871;positive regulation of B cell activation;0.0303974513323445!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0304908463964304!GO:0030867;rough endoplasmic reticulum membrane;0.0307214227469243!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0307281896063009!GO:0008180;signalosome;0.0310087533404879!GO:0000776;kinetochore;0.0310774554185996!GO:0019814;immunoglobulin complex;0.0314124022072207!GO:0019815;B cell receptor complex;0.0314124022072207!GO:0004722;protein serine/threonine phosphatase activity;0.0314340825460998!GO:0050853;B cell receptor signaling pathway;0.0325079940863084!GO:0019867;outer membrane;0.0325161304731163!GO:0046519;sphingoid metabolic process;0.0327116342798565!GO:0000119;mediator complex;0.0327116342798565!GO:0030041;actin filament polymerization;0.0330144720866986!GO:0008017;microtubule binding;0.0336395861884689!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0336576106727772!GO:0005869;dynactin complex;0.0339662228162046!GO:0000059;protein import into nucleus, docking;0.0340773587984488!GO:0004576;oligosaccharyl transferase activity;0.0340773587984488!GO:0008287;protein serine/threonine phosphatase complex;0.0341113898979407!GO:0030880;RNA polymerase complex;0.0341113898979407!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0344329018543805!GO:0010257;NADH dehydrogenase complex assembly;0.0344329018543805!GO:0033108;mitochondrial respiratory chain complex assembly;0.0344329018543805!GO:0042824;MHC class I peptide loading complex;0.0346455349613283!GO:0031982;vesicle;0.0352946228052618!GO:0009112;nucleobase metabolic process;0.0353244827408118!GO:0006904;vesicle docking during exocytosis;0.0364500423532469!GO:0022415;viral reproductive process;0.0365633730159424!GO:0045792;negative regulation of cell size;0.0366147551654165!GO:0008139;nuclear localization sequence binding;0.0369190487978623!GO:0043621;protein self-association;0.0370269317902434!GO:0051540;metal cluster binding;0.0374272405132738!GO:0051536;iron-sulfur cluster binding;0.0374272405132738!GO:0009161;ribonucleoside monophosphate metabolic process;0.0376368915838183!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0376368915838183!GO:0007033;vacuole organization and biogenesis;0.0377450675183673!GO:0000279;M phase;0.0382631026571764!GO:0004402;histone acetyltransferase activity;0.038294553564163!GO:0004468;lysine N-acetyltransferase activity;0.038294553564163!GO:0006914;autophagy;0.0386723253026584!GO:0008538;proteasome activator activity;0.0386875980619864!GO:0017134;fibroblast growth factor binding;0.0387255980318087!GO:0030660;Golgi-associated vesicle membrane;0.0388733081063757!GO:0030522;intracellular receptor-mediated signaling pathway;0.0392520248915566!GO:0051090;regulation of transcription factor activity;0.0394223110944207!GO:0018193;peptidyl-amino acid modification;0.0396485810940299!GO:0006144;purine base metabolic process;0.040285888166337!GO:0030308;negative regulation of cell growth;0.0403960180877114!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0404839258496096!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0404839258496096!GO:0043280;positive regulation of caspase activity;0.0415151183855685!GO:0030119;AP-type membrane coat adaptor complex;0.0420603457231046!GO:0051092;activation of NF-kappaB transcription factor;0.0426635348630117!GO:0060090;molecular adaptor activity;0.0429003949064459!GO:0008250;oligosaccharyl transferase complex;0.0437587271175648!GO:0032039;integrator complex;0.0437587271175648!GO:0006505;GPI anchor metabolic process;0.0446660902228698!GO:0016790;thiolester hydrolase activity;0.0449789116579011!GO:0045926;negative regulation of growth;0.0449789116579011!GO:0032508;DNA duplex unwinding;0.0451206750318906!GO:0032392;DNA geometric change;0.0451206750318906!GO:0031647;regulation of protein stability;0.0453682721227211!GO:0000123;histone acetyltransferase complex;0.0454234144759661!GO:0005784;translocon complex;0.0458533900435334!GO:0004003;ATP-dependent DNA helicase activity;0.0460161808704398!GO:0042611;MHC protein complex;0.0460831894693441!GO:0008276;protein methyltransferase activity;0.0460831894693441!GO:0046979;TAP2 binding;0.0463609339011279!GO:0046977;TAP binding;0.0463609339011279!GO:0046978;TAP1 binding;0.0463609339011279!GO:0045603;positive regulation of endothelial cell differentiation;0.0467527360553508!GO:0016566;specific transcriptional repressor activity;0.0472787807031152!GO:0000339;RNA cap binding;0.0474332856939363!GO:0051098;regulation of binding;0.0480383885939846!GO:0046128;purine ribonucleoside metabolic process;0.0480383885939846!GO:0042278;purine nucleoside metabolic process;0.0480383885939846!GO:0007050;cell cycle arrest;0.0481615245333251!GO:0043506;regulation of JNK activity;0.0481615245333251!GO:0031123;RNA 3'-end processing;0.0482572615513227!GO:0000075;cell cycle checkpoint;0.0485228269819723!GO:0008320;protein transmembrane transporter activity;0.0493213797119848!GO:0000781;chromosome, telomeric region;0.0496924182433709
|sample_id=12199
|sample_id=12199
|sample_note=
|sample_note=
Line 76: Line 100:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=POU2F1..3:3.15415524499;POU5F1:3.03083153519;FOXA2:2.28424296623;PBX1:2.1554327244;DMAP1_NCOR{1,2}_SMARC:1.9628483337;FOX{F1,F2,J1}:1.90034535853;ELF1,2,4:1.83808605138;TLX2:1.81230028225;FOXO1,3,4:1.69791079372;FOX{I1,J2}:1.61659435082;IRF1,2:1.4553960099;FOX{D1,D2}:1.4129457342;SPI1:1.40439693585;ELK1,4_GABP{A,B1}:1.371730431;AIRE:1.19411139847;RUNX1..3:1.1582929281;STAT1,3:1.15246291619;PDX1:1.11318207724;ETS1,2:1.1090040602;SPIB:1.10296799819;NFKB1_REL_RELA:1.06300995019;BPTF:1.03643926508;NKX2-2,8:1.02265293207;ALX1:0.970598737823;YY1:0.968522335579;CDX1,2,4:0.96735818702;FOXN1:0.946475603059;LMO2:0.896328956236;RFX2..5_RFXANK_RFXAP:0.886679284561;NANOG{mouse}:0.876586629225;NKX6-1,2:0.8734248012;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.768812501655;MYOD1:0.748407062999;FOXP3:0.746018160917;ESR1:0.731471884258;CRX:0.727301693801;ZEB1:0.720891096841;OCT4_SOX2{dimer}:0.71089968787;IRF7:0.708158558151;CREB1:0.612780906717;BREu{core}:0.572151454123;VSX1,2:0.557874242177;PAX6:0.542514472533;GATA6:0.475899720168;TGIF1:0.45972783295;LEF1_TCF7_TCF7L1,2:0.437540457201;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.430830171932;RORA:0.412553295018;MYB:0.399708491839;NRF1:0.357358209008;FOXP1:0.352714429205;NHLH1,2:0.350457279407;CUX2:0.312040430908;MEF2{A,B,C,D}:0.307591801986;FOXL1:0.301142260044;SNAI1..3:0.279178444197;ATF5_CREB3:0.252342470864;SREBF1,2:0.247876138004;SOX{8,9,10}:0.231461325738;PAX2:0.229593751351;ATF2:0.211672584219;HMX1:0.194211200634;PAX3,7:0.17672507861;ZNF143:0.175050499538;HAND1,2:0.166679507407;SOX5:0.146003214035;HES1:0.10946259045;EP300:0.0946142288144;DBP:0.0939411030864;HBP1_HMGB_SSRP1_UBTF:0.0924412839811;IKZF2:0.0900453991059;ZBTB16:0.0633289934759;ZNF148:0.0449981388704;GLI1..3:0.0367637044152;NKX2-1,4:0.0351555159058;AHR_ARNT_ARNT2:0.00957899623138;STAT5{A,B}:-0.00234311134136;EVI1:-0.0149135647218;TAL1_TCF{3,4,12}:-0.0153386347177;PRRX1,2:-0.0165930970532;T:-0.0182420034682;FOXQ1:-0.0375815536037;TEF:-0.0418751193857;ZFP161:-0.0773446143255;NFIL3:-0.104516444722;ATF4:-0.107925957297;ADNP_IRX_SIX_ZHX:-0.109228333651;NFIX:-0.14055473409;NANOG:-0.142707861805;NFY{A,B,C}:-0.160212020637;CDC5L:-0.166753895092;TOPORS:-0.168534403495;ALX4:-0.182285777618;NR5A1,2:-0.182996560825;POU1F1:-0.201917017688;EBF1:-0.210476878289;HOX{A4,D4}:-0.24825880962;RBPJ:-0.256240150464;HIF1A:-0.263396018738;NFATC1..3:-0.269829822659;HNF4A_NR2F1,2:-0.273886865917;PRDM1:-0.277973575498;E2F1..5:-0.286196820592;AR:-0.369493726239;CEBPA,B_DDIT3:-0.371565360418;GFI1:-0.399842019112;MYFfamily:-0.405881097788;NR6A1:-0.431100720422;SPZ1:-0.447195911256;ARID5B:-0.452125131007;HNF1A:-0.454729044743;TFCP2:-0.458649033344;NKX2-3_NKX2-5:-0.46078536413;RXRA_VDR{dimer}:-0.47057523048;FOSL2:-0.502531014403;RFX1:-0.544800257436;SMAD1..7,9:-0.569213108158;ESRRA:-0.582406554909;FOS_FOS{B,L1}_JUN{B,D}:-0.60003226961;TFAP4:-0.601687443032;NKX3-1:-0.606143971066;HOXA9_MEIS1:-0.625638885582;HOX{A6,A7,B6,B7}:-0.642182706136;HMGA1,2:-0.647181416801;PPARG:-0.649696130941;MAFB:-0.661585668692;bHLH_family:-0.663856172947;JUN:-0.683483253845;ZNF238:-0.691128428751;EN1,2:-0.699381679213;SOX2:-0.704416142117;ATF6:-0.735750964701;HOX{A5,B5}:-0.736971600229;NKX3-2:-0.748451753147;BACH2:-0.791554574984;ONECUT1,2:-0.802758623244;PAX4:-0.818014736743;MYBL2:-0.822734359244;SOX17:-0.850785123966;NR1H4:-0.851814183526;SRF:-0.892841530367;NFE2:-0.893663119594;HLF:-0.895786391057;EGR1..3:-0.924404640185;PATZ1:-0.927066256766;ZNF423:-0.982398794291;MED-1{core}:-0.989688075963;REST:-1.014672372;ZNF384:-1.02394163334;NR3C1:-1.02655798973;RREB1:-1.03724343601;MZF1:-1.04905455433;TP53:-1.05117911136;GFI1B:-1.06947658843;RXR{A,B,G}:-1.12086867348;NFE2L2:-1.12472588301;TBP:-1.14386686539;TBX4,5:-1.15162612345;GCM1,2:-1.19876948537;LHX3,4:-1.22040066198;PAX8:-1.24631345585;POU6F1:-1.25627752671;MAZ:-1.25642069462;XCPE1{core}:-1.25647814197;MTF1:-1.27166136918;FOXD3:-1.29116197224;STAT2,4,6:-1.30925533241;UFEwm:-1.31938225297;XBP1:-1.32276761506;MTE{core}:-1.33372371022;PITX1..3:-1.33383722307;FOXM1:-1.33549539685;GATA4:-1.3438826298;GZF1:-1.36801410089;HIC1:-1.4613317828;HSF1,2:-1.49110324234;TFAP2B:-1.49675058242;KLF4:-1.5180246293;TFAP2{A,C}:-1.540584431;TEAD1:-1.55298349298;GTF2I:-1.57059083662;NFE2L1:-1.58270054735;SP1:-1.63135405573;ZIC1..3:-1.69276047684;ZBTB6:-1.70585889089;TLX1..3_NFIC{dimer}:-1.78333511531;PAX5:-1.79887954097;TFDP1:-1.83153083379;GTF2A1,2:-1.91318314258;IKZF1:-1.93069939381;POU3F1..4:-2.0848626111;PAX1,9:-2.1005887767
|top_motifs=POU2F1..3:3.15415524499;POU5F1:3.03083153519;FOXA2:2.28424296623;PBX1:2.1554327244;DMAP1_NCOR{1,2}_SMARC:1.9628483337;FOX{F1,F2,J1}:1.90034535853;ELF1,2,4:1.83808605138;TLX2:1.81230028225;FOXO1,3,4:1.69791079372;FOX{I1,J2}:1.61659435082;IRF1,2:1.4553960099;FOX{D1,D2}:1.4129457342;SPI1:1.40439693585;ELK1,4_GABP{A,B1}:1.371730431;AIRE:1.19411139847;RUNX1..3:1.1582929281;STAT1,3:1.15246291619;PDX1:1.11318207724;ETS1,2:1.1090040602;SPIB:1.10296799819;NFKB1_REL_RELA:1.06300995019;BPTF:1.03643926508;NKX2-2,8:1.02265293207;ALX1:0.970598737823;YY1:0.968522335579;CDX1,2,4:0.96735818702;FOXN1:0.946475603059;LMO2:0.896328956236;RFX2..5_RFXANK_RFXAP:0.886679284561;NANOG{mouse}:0.876586629225;NKX6-1,2:0.8734248012;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.768812501655;MYOD1:0.748407062999;FOXP3:0.746018160917;ESR1:0.731471884258;CRX:0.727301693801;ZEB1:0.720891096841;OCT4_SOX2{dimer}:0.71089968787;IRF7:0.708158558151;CREB1:0.612780906717;BREu{core}:0.572151454123;VSX1,2:0.557874242177;PAX6:0.542514472533;GATA6:0.475899720168;TGIF1:0.45972783295;LEF1_TCF7_TCF7L1,2:0.437540457201;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.430830171932;RORA:0.412553295018;MYB:0.399708491839;NRF1:0.357358209008;FOXP1:0.352714429205;NHLH1,2:0.350457279407;CUX2:0.312040430908;MEF2{A,B,C,D}:0.307591801986;FOXL1:0.301142260044;SNAI1..3:0.279178444197;ATF5_CREB3:0.252342470864;SREBF1,2:0.247876138004;SOX{8,9,10}:0.231461325738;PAX2:0.229593751351;ATF2:0.211672584219;HMX1:0.194211200634;PAX3,7:0.17672507861;ZNF143:0.175050499538;HAND1,2:0.166679507407;SOX5:0.146003214035;HES1:0.10946259045;EP300:0.0946142288144;DBP:0.0939411030864;HBP1_HMGB_SSRP1_UBTF:0.0924412839811;IKZF2:0.0900453991059;ZBTB16:0.0633289934759;ZNF148:0.0449981388704;GLI1..3:0.0367637044152;NKX2-1,4:0.0351555159058;AHR_ARNT_ARNT2:0.00957899623138;STAT5{A,B}:-0.00234311134136;EVI1:-0.0149135647218;TAL1_TCF{3,4,12}:-0.0153386347177;PRRX1,2:-0.0165930970532;T:-0.0182420034682;FOXQ1:-0.0375815536037;TEF:-0.0418751193857;ZFP161:-0.0773446143255;NFIL3:-0.104516444722;ATF4:-0.107925957297;ADNP_IRX_SIX_ZHX:-0.109228333651;NFIX:-0.14055473409;NANOG:-0.142707861805;NFY{A,B,C}:-0.160212020637;CDC5L:-0.166753895092;TOPORS:-0.168534403495;ALX4:-0.182285777618;NR5A1,2:-0.182996560825;POU1F1:-0.201917017688;EBF1:-0.210476878289;HOX{A4,D4}:-0.24825880962;RBPJ:-0.256240150464;HIF1A:-0.263396018738;NFATC1..3:-0.269829822659;HNF4A_NR2F1,2:-0.273886865917;PRDM1:-0.277973575498;E2F1..5:-0.286196820592;AR:-0.369493726239;CEBPA,B_DDIT3:-0.371565360418;GFI1:-0.399842019112;MYFfamily:-0.405881097788;NR6A1:-0.431100720422;SPZ1:-0.447195911256;ARID5B:-0.452125131007;HNF1A:-0.454729044743;TFCP2:-0.458649033344;NKX2-3_NKX2-5:-0.46078536413;RXRA_VDR{dimer}:-0.47057523048;FOSL2:-0.502531014403;RFX1:-0.544800257436;SMAD1..7,9:-0.569213108158;ESRRA:-0.582406554909;FOS_FOS{B,L1}_JUN{B,D}:-0.60003226961;TFAP4:-0.601687443032;NKX3-1:-0.606143971066;HOXA9_MEIS1:-0.625638885582;HOX{A6,A7,B6,B7}:-0.642182706136;HMGA1,2:-0.647181416801;PPARG:-0.649696130941;MAFB:-0.661585668692;bHLH_family:-0.663856172947;JUN:-0.683483253845;ZNF238:-0.691128428751;EN1,2:-0.699381679213;SOX2:-0.704416142117;ATF6:-0.735750964701;HOX{A5,B5}:-0.736971600229;NKX3-2:-0.748451753147;BACH2:-0.791554574984;ONECUT1,2:-0.802758623244;PAX4:-0.818014736743;MYBL2:-0.822734359244;SOX17:-0.850785123966;NR1H4:-0.851814183526;SRF:-0.892841530367;NFE2:-0.893663119594;HLF:-0.895786391057;EGR1..3:-0.924404640185;PATZ1:-0.927066256766;ZNF423:-0.982398794291;MED-1{core}:-0.989688075963;REST:-1.014672372;ZNF384:-1.02394163334;NR3C1:-1.02655798973;RREB1:-1.03724343601;MZF1:-1.04905455433;TP53:-1.05117911136;GFI1B:-1.06947658843;RXR{A,B,G}:-1.12086867348;NFE2L2:-1.12472588301;TBP:-1.14386686539;TBX4,5:-1.15162612345;GCM1,2:-1.19876948537;LHX3,4:-1.22040066198;PAX8:-1.24631345585;POU6F1:-1.25627752671;MAZ:-1.25642069462;XCPE1{core}:-1.25647814197;MTF1:-1.27166136918;FOXD3:-1.29116197224;STAT2,4,6:-1.30925533241;UFEwm:-1.31938225297;XBP1:-1.32276761506;MTE{core}:-1.33372371022;PITX1..3:-1.33383722307;FOXM1:-1.33549539685;GATA4:-1.3438826298;GZF1:-1.36801410089;HIC1:-1.4613317828;HSF1,2:-1.49110324234;TFAP2B:-1.49675058242;KLF4:-1.5180246293;TFAP2{A,C}:-1.540584431;TEAD1:-1.55298349298;GTF2I:-1.57059083662;NFE2L1:-1.58270054735;SP1:-1.63135405573;ZIC1..3:-1.69276047684;ZBTB6:-1.70585889089;TLX1..3_NFIC{dimer}:-1.78333511531;PAX5:-1.79887954097;TFDP1:-1.83153083379;GTF2A1,2:-1.91318314258;IKZF1:-1.93069939381;POU3F1..4:-2.0848626111;PAX1,9:-2.1005887767
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12199-129C3;search_select_hide=table117:FF:12199-129C3
}}
}}

Latest revision as of 18:34, 4 June 2020

Name:CD19+ B Cells (pluriselect), donor090309, donation3
Species:Human (Homo sapiens)
Library ID:CNhs12181,RDhi10009
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeb cell
cell lineNA
companyNA
collaborationMatched_genome_OSC(contact:Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
RNA-Seq  SAMD00013689
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12181 CAGE DRX008052 DRR008924
RDhi10009 RNA-Seq DRX012343 DRR013791
Accession ID Hg19

Library idBAMCTSS
CNhs12181 DRZ000349 DRZ001734
RDhi10009 DRZ002992
Accession ID Hg38

Library idBAMCTSS
CNhs12181 DRZ011699 DRZ013084
RDhi10009
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0728
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.221
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.206
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.357
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.314
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.444
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.446
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.659
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.258
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary1.338
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.432
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.17
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.588
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.218
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.573
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.276
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil1.033
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.519
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.276
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix1.099
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.746
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12181

Jaspar motifP-value
MA0002.28.74166e-6
MA0003.10.567
MA0004.10.3
MA0006.10.379
MA0007.10.783
MA0009.10.798
MA0014.10.881
MA0017.10.091
MA0018.20.994
MA0019.10.705
MA0024.10.851
MA0025.10.645
MA0027.10.81
MA0028.13.94867e-5
MA0029.10.727
MA0030.10.0225
MA0031.10.0503
MA0035.20.443
MA0038.10.111
MA0039.20.758
MA0040.10.947
MA0041.10.16
MA0042.10.805
MA0043.10.806
MA0046.10.976
MA0047.20.165
MA0048.10.451
MA0050.19.38537e-12
MA0051.14.97101e-5
MA0052.10.243
MA0055.10.76
MA0057.10.705
MA0058.10.201
MA0059.10.272
MA0060.10.391
MA0061.11.41794e-4
MA0062.23.32705e-14
MA0065.20.0276
MA0066.10.592
MA0067.10.608
MA0068.10.369
MA0069.10.553
MA0070.10.705
MA0071.10.741
MA0072.10.535
MA0073.10.821
MA0074.10.704
MA0076.16.50952e-8
MA0077.10.416
MA0078.10.744
MA0079.20.31
MA0080.24.29764e-11
MA0081.12.06019e-4
MA0083.10.0609
MA0084.10.335
MA0087.10.341
MA0088.10.119
MA0090.14.34032e-4
MA0091.10.884
MA0092.10.82
MA0093.10.343
MA0099.22.25179e-4
MA0100.10.155
MA0101.10.0229
MA0102.20.301
MA0103.10.0105
MA0104.20.0858
MA0105.17.27834e-7
MA0106.10.464
MA0107.10.0129
MA0108.21.23173e-8
MA0111.10.356
MA0112.20.0236
MA0113.10.892
MA0114.10.0963
MA0115.10.341
MA0116.12.29382e-5
MA0117.10.75
MA0119.10.52
MA0122.10.656
MA0124.10.647
MA0125.10.833
MA0131.10.0781
MA0135.10.0278
MA0136.13.9392e-17
MA0137.20.977
MA0138.20.631
MA0139.10.197
MA0140.10.171
MA0141.10.917
MA0142.10.145
MA0143.10.525
MA0144.10.581
MA0145.10.683
MA0146.10.347
MA0147.10.0934
MA0148.10.484
MA0149.10.097
MA0150.10.385
MA0152.10.308
MA0153.10.0433
MA0154.14.95108e-4
MA0155.10.709
MA0156.11.83974e-13
MA0157.10.0859
MA0159.10.0401
MA0160.10.454
MA0162.10.988
MA0163.18.63212e-9
MA0164.10.857
MA0258.10.121
MA0259.10.394



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12181

Novel motifP-value
10.0921
100.0366
1000.6
1010.278
1020.93
1030.0434
1040.111
1050.322
1060.834
1070.384
1080.32
1090.0647
110.0808
1100.149
1110.114
1120.34
1130.0289
1140.415
1150.851
1160.779
1170.00232
1180.109
1190.497
120.853
1200.572
1210.458
1220.343
1230.0251
1240.139
1250.34
1260.252
1270.643
1280.428
1290.556
130.542
1300.542
1310.846
1320.375
1330.00109
1340.606
1350.512
1360.499
1370.141
1380.45
1390.112
140.462
1400.542
1410.314
1420.302
1430.0334
1440.814
1450.24
1460.0979
1470.108
1480.123
1490.267
150.13
1500.549
1510.927
1520.374
1530.432
1540.896
1550.0075
1560.398
1570.244
1580.1
1590.177
160.936
1600.272
1610.067
1620.8
1630.297
1640.614
1650.619
1660.477
1670.143
1680.196
1690.55
170.922
180.623
190.74
20.771
200.66
210.641
220.871
230.678
240.495
250.0304
260.16
270.224
280.421
290.0582
30.0499
300.417
310.749
320.232
330.517
340.955
350.109
360.0239
370.199
380.325
390.393
40.613
400.242
410.169
420.113
430.156
440.389
450.962
460.181
470.0788
480.163
490.0998
50.358
500.792
510.462
520.425
530.515
540.836
550.0955
560.749
570.384
580.0239
590.343
60.851
600.491
610.0499
620.0296
630.77
640.224
650.691
660.638
670.461
680.689
690.655
70.138
700.095
710.0403
720.0681
730.758
740.182
750.0115
760.0698
770.533
780.175
790.705
80.495
800.0111
810.166
820.162
830.658
840.436
850.593
860.126
870.266
880.657
890.927
90.485
900.0284
910.53
920.356
930.825
940.0483
950.00953
960.618
970.391
980.116
990.0396



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12181


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000025 (CD19-positive B cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

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