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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|DRA_sample_Accession=CAGE@SAMD00005355
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000624,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000792,CL:0000815,CL:0000827,CL:0000837,CL:0000838,CL:0000898,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420,CL:0002677
|accession_numbers=CAGE;DRX008185;DRR009057;DRZ000482;DRZ001867;DRZ011832;DRZ013217
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001
|comment=Changed from previous label. TODO: full classification
|comment=Changed from previous label. TODO: full classification
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|
|expression_enrichment_score
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 35: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%252c%2520donor2.CNhs13206.11797-124C6.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%252c%2520donor2.CNhs13206.11797-124C6.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%252c%2520donor2.CNhs13206.11797-124C6.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%252c%2520donor2.CNhs13206.11797-124C6.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%252c%2520donor2.CNhs13206.11797-124C6.hg38.nobarcode.ctss.bed.gz
|id=FF:11797-124C6
|id=FF:11797-124C6
|is_a=EFO:0002091;;FF:0000002;;FF:0000210
|is_a=EFO:0002091;;FF:0000002;;FF:0000210
|is_obsolete=
|library_id=CNhs13206
|library_id_phase_based=2:CNhs13206
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11797
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11797
|name=CD4+CD25+CD45RA- memory regulatory T cells, donor2
|name=CD4+CD25+CD45RA- memory regulatory T cells, donor2
|namespace=
|namespace=
Line 42: Line 60:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs13206,LSID1004,release012,COMPLETED
|profile_hcage=CNhs13206,LSID1004,release012,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=124
|rna_box=124
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 78:
|rna_weight_ug=1.231
|rna_weight_ug=1.231
|sample_age=23
|sample_age=23
|sample_category=primary cells
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|sample_cell_catalog=
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|sample_cell_line=
Line 69: Line 91:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.47506872759563e-228!GO:0043227;membrane-bound organelle;3.58735222550917e-199!GO:0043231;intracellular membrane-bound organelle;8.01186937565006e-199!GO:0043226;organelle;1.62624471118059e-186!GO:0043229;intracellular organelle;8.17693554987722e-186!GO:0005737;cytoplasm;2.34826112190337e-133!GO:0044422;organelle part;2.21846975198889e-116!GO:0044446;intracellular organelle part;9.75893256896483e-115!GO:0005634;nucleus;4.64012818954624e-105!GO:0032991;macromolecular complex;1.39811000966291e-97!GO:0043170;macromolecule metabolic process;8.18520311963344e-97!GO:0044237;cellular metabolic process;8.66935075246829e-96!GO:0044444;cytoplasmic part;2.60876363610115e-93!GO:0044238;primary metabolic process;1.79943597277692e-91!GO:0030529;ribonucleoprotein complex;1.17021727407386e-89!GO:0003723;RNA binding;2.57057034007985e-79!GO:0044428;nuclear part;1.93200573665835e-76!GO:0043283;biopolymer metabolic process;1.04752792978672e-67!GO:0043233;organelle lumen;3.55956511532669e-66!GO:0031974;membrane-enclosed lumen;3.55956511532669e-66!GO:0010467;gene expression;3.73211401264748e-60!GO:0005739;mitochondrion;2.30218017892274e-57!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.41420319815132e-56!GO:0006396;RNA processing;4.23823673259625e-54!GO:0006412;translation;7.93098429131042e-52!GO:0005515;protein binding;1.0831055868524e-51!GO:0005840;ribosome;5.42063540037652e-50!GO:0043234;protein complex;1.67312679086465e-47!GO:0016071;mRNA metabolic process;3.20432227265919e-47!GO:0031981;nuclear lumen;7.15282446941269e-47!GO:0033036;macromolecule localization;1.95150884850729e-46!GO:0019538;protein metabolic process;1.95150884850729e-46!GO:0015031;protein transport;5.01703559986891e-45!GO:0044267;cellular protein metabolic process;1.27987124144865e-44!GO:0003735;structural constituent of ribosome;2.43013380958082e-44!GO:0045184;establishment of protein localization;1.62797815869178e-43!GO:0044260;cellular macromolecule metabolic process;2.08679216072802e-43!GO:0008104;protein localization;6.09468395267052e-43!GO:0003676;nucleic acid binding;6.79173019174838e-43!GO:0044429;mitochondrial part;1.71549567868431e-41!GO:0008380;RNA splicing;2.14860075453568e-41!GO:0006397;mRNA processing;4.86391329837091e-41!GO:0009059;macromolecule biosynthetic process;1.00555922301307e-39!GO:0033279;ribosomal subunit;3.80462305322811e-39!GO:0031090;organelle membrane;1.52564930980061e-37!GO:0031967;organelle envelope;1.67836986176125e-37!GO:0031975;envelope;3.67588289137296e-37!GO:0005829;cytosol;4.90772893270953e-34!GO:0006259;DNA metabolic process;1.1540774811323e-32!GO:0016070;RNA metabolic process;1.62687588676368e-32!GO:0046907;intracellular transport;1.76800696906702e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.00877758067523e-30!GO:0005681;spliceosome;1.10111685291189e-30!GO:0044249;cellular biosynthetic process;1.36122548018993e-30!GO:0006886;intracellular protein transport;1.46126971812096e-30!GO:0009058;biosynthetic process;4.10222041537769e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.63468688575129e-30!GO:0005654;nucleoplasm;7.32069199377521e-30!GO:0065003;macromolecular complex assembly;2.2860192020576e-29!GO:0044445;cytosolic part;2.36546880046212e-27!GO:0016043;cellular component organization and biogenesis;2.62726608437537e-27!GO:0005740;mitochondrial envelope;1.03898050684307e-26!GO:0022607;cellular component assembly;7.33448664193786e-26!GO:0031966;mitochondrial membrane;9.92364319706719e-26!GO:0006512;ubiquitin cycle;1.17893045271663e-25!GO:0019866;organelle inner membrane;1.5318177950389e-24!GO:0000166;nucleotide binding;4.62281837213096e-24!GO:0044451;nucleoplasm part;1.2725985360047e-23!GO:0006996;organelle organization and biogenesis;2.07512266866517e-23!GO:0005743;mitochondrial inner membrane;2.15829055881112e-22!GO:0051641;cellular localization;5.30617412502392e-22!GO:0051649;establishment of cellular localization;7.77877321306185e-22!GO:0006119;oxidative phosphorylation;2.92150188488907e-20!GO:0015935;small ribosomal subunit;2.93689952956117e-20!GO:0022618;protein-RNA complex assembly;3.58926232725052e-20!GO:0016874;ligase activity;3.80417694695698e-20!GO:0043228;non-membrane-bound organelle;5.58375261376738e-20!GO:0043232;intracellular non-membrane-bound organelle;5.58375261376738e-20!GO:0015934;large ribosomal subunit;7.82776056704072e-20!GO:0006915;apoptosis;3.72682264904707e-19!GO:0012501;programmed cell death;3.77552419398305e-19!GO:0044455;mitochondrial membrane part;5.10723691966188e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.19755435235291e-19!GO:0016462;pyrophosphatase activity;8.21443012098252e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;8.75726194077435e-19!GO:0017111;nucleoside-triphosphatase activity;1.36714293509846e-18!GO:0044265;cellular macromolecule catabolic process;1.89241625300624e-18!GO:0008219;cell death;2.22166464275145e-18!GO:0016265;death;2.22166464275145e-18!GO:0043412;biopolymer modification;3.06864806617219e-18!GO:0006974;response to DNA damage stimulus;5.90585094826108e-18!GO:0005730;nucleolus;7.80390335683605e-18!GO:0031980;mitochondrial lumen;1.18473987996315e-17!GO:0005759;mitochondrial matrix;1.18473987996315e-17!GO:0019941;modification-dependent protein catabolic process;2.31932384680139e-17!GO:0043632;modification-dependent macromolecule catabolic process;2.31932384680139e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.48029037094616e-17!GO:0006605;protein targeting;3.30256877369951e-17!GO:0006511;ubiquitin-dependent protein catabolic process;4.69797684042163e-17!GO:0032553;ribonucleotide binding;5.04317383703106e-17!GO:0032555;purine ribonucleotide binding;5.04317383703106e-17!GO:0044257;cellular protein catabolic process;5.7801658289339e-17!GO:0008135;translation factor activity, nucleic acid binding;1.34611535403239e-16!GO:0017076;purine nucleotide binding;1.37768553340068e-16!GO:0043285;biopolymer catabolic process;1.96356707414266e-16!GO:0016604;nuclear body;2.1520389801431e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.1956158354781e-16!GO:0051276;chromosome organization and biogenesis;3.21638118895349e-16!GO:0006464;protein modification process;6.59517733288009e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;6.59517733288009e-16!GO:0008134;transcription factor binding;1.10722614947871e-15!GO:0005746;mitochondrial respiratory chain;1.87575204081297e-15!GO:0006281;DNA repair;2.0492876660301e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.0492876660301e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.6059945397198e-15!GO:0006323;DNA packaging;2.80530493377917e-15!GO:0006457;protein folding;3.25861362517465e-15!GO:0009057;macromolecule catabolic process;4.17779589636468e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;7.82145065522944e-15!GO:0000375;RNA splicing, via transesterification reactions;7.82145065522944e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.82145065522944e-15!GO:0007049;cell cycle;1.04271579608345e-14!GO:0006913;nucleocytoplasmic transport;1.29623655702379e-14!GO:0005524;ATP binding;1.78610279475736e-14!GO:0051169;nuclear transport;2.15592452265835e-14!GO:0043687;post-translational protein modification;2.19930043863953e-14!GO:0042623;ATPase activity, coupled;2.39253760843987e-14!GO:0016887;ATPase activity;2.41947357777319e-14!GO:0005694;chromosome;3.39674245358238e-14!GO:0032559;adenyl ribonucleotide binding;5.29114544232681e-14!GO:0050136;NADH dehydrogenase (quinone) activity;6.65149044036226e-14!GO:0003954;NADH dehydrogenase activity;6.65149044036226e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.65149044036226e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;9.25857296630426e-14!GO:0042981;regulation of apoptosis;1.36033988852891e-13!GO:0030554;adenyl nucleotide binding;1.87130646750514e-13!GO:0043067;regulation of programmed cell death;2.17293029540397e-13!GO:0030163;protein catabolic process;2.77947092063111e-13!GO:0016607;nuclear speck;3.21289439274018e-13!GO:0012505;endomembrane system;5.62970074257331e-13!GO:0006413;translational initiation;8.15818945267298e-13!GO:0003743;translation initiation factor activity;9.7354912750717e-13!GO:0005761;mitochondrial ribosome;1.65043051460118e-12!GO:0000313;organellar ribosome;1.65043051460118e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.83005408019005e-12!GO:0042773;ATP synthesis coupled electron transport;1.83005408019005e-12!GO:0050794;regulation of cellular process;2.03067223769257e-12!GO:0044427;chromosomal part;3.1748740010407e-12!GO:0030964;NADH dehydrogenase complex (quinone);4.42783369962266e-12!GO:0045271;respiratory chain complex I;4.42783369962266e-12!GO:0005747;mitochondrial respiratory chain complex I;4.42783369962266e-12!GO:0065004;protein-DNA complex assembly;4.42783369962266e-12!GO:0044248;cellular catabolic process;4.63066302688374e-12!GO:0004386;helicase activity;4.65494138725725e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.35958652284463e-11!GO:0005635;nuclear envelope;1.56711004076921e-11!GO:0008639;small protein conjugating enzyme activity;2.42174329938481e-11!GO:0051082;unfolded protein binding;3.31963757720931e-11!GO:0006333;chromatin assembly or disassembly;3.45112480525101e-11!GO:0004842;ubiquitin-protein ligase activity;3.95706352757166e-11!GO:0019787;small conjugating protein ligase activity;4.3735306199868e-11!GO:0019222;regulation of metabolic process;4.39465951408014e-11!GO:0042254;ribosome biogenesis and assembly;4.90312269086974e-11!GO:0048770;pigment granule;5.27257026104994e-11!GO:0042470;melanosome;5.27257026104994e-11!GO:0022402;cell cycle process;5.93426705953319e-11!GO:0031965;nuclear membrane;6.59025702724275e-11!GO:0006446;regulation of translational initiation;6.59025702724275e-11!GO:0017038;protein import;1.45797947234284e-10!GO:0008026;ATP-dependent helicase activity;1.64499364893238e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.68241171361987e-10!GO:0016568;chromatin modification;1.80003610554377e-10!GO:0009719;response to endogenous stimulus;2.1694811482232e-10!GO:0048193;Golgi vesicle transport;2.91552495367248e-10!GO:0003712;transcription cofactor activity;7.20068349719739e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.51048799586026e-10!GO:0000785;chromatin;1.03908210092901e-09!GO:0051186;cofactor metabolic process;1.05095232383523e-09!GO:0044453;nuclear membrane part;1.27181736852198e-09!GO:0019829;cation-transporting ATPase activity;1.47250478797236e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.17993121172482e-09!GO:0031323;regulation of cellular metabolic process;3.93394299279178e-09!GO:0051726;regulation of cell cycle;4.59291861553885e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.73479992079904e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.73479992079904e-09!GO:0043566;structure-specific DNA binding;5.8546432548891e-09!GO:0016881;acid-amino acid ligase activity;6.03059591257338e-09!GO:0000074;regulation of progression through cell cycle;7.71289059102989e-09!GO:0006334;nucleosome assembly;1.06977004011834e-08!GO:0006403;RNA localization;1.66014490560364e-08!GO:0006350;transcription;1.66323855517318e-08!GO:0005794;Golgi apparatus;1.74514824204578e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.74514824204578e-08!GO:0050657;nucleic acid transport;1.74514824204578e-08!GO:0051236;establishment of RNA localization;1.74514824204578e-08!GO:0050658;RNA transport;1.74514824204578e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.84510611022388e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.26561944470724e-08!GO:0015078;hydrogen ion transmembrane transporter activity;2.29872782648318e-08!GO:0031497;chromatin assembly;2.30157070514783e-08!GO:0005643;nuclear pore;2.37742632323575e-08!GO:0008270;zinc ion binding;2.4191572698547e-08!GO:0009259;ribonucleotide metabolic process;3.27312915117712e-08!GO:0005839;proteasome core complex (sensu Eukaryota);3.643773362434e-08!GO:0050789;regulation of biological process;4.13886517242633e-08!GO:0008565;protein transporter activity;4.13886517242633e-08!GO:0006793;phosphorus metabolic process;4.36109080261739e-08!GO:0006796;phosphate metabolic process;4.36109080261739e-08!GO:0006399;tRNA metabolic process;5.26690215184232e-08!GO:0007243;protein kinase cascade;5.71476835964687e-08!GO:0009260;ribonucleotide biosynthetic process;7.00425274389124e-08!GO:0003697;single-stranded DNA binding;7.93674252534702e-08!GO:0006164;purine nucleotide biosynthetic process;7.93674252534702e-08!GO:0032446;protein modification by small protein conjugation;8.68334886294026e-08!GO:0016072;rRNA metabolic process;9.98063490687051e-08!GO:0005768;endosome;1.03917092799092e-07!GO:0004298;threonine endopeptidase activity;1.22697264195074e-07!GO:0006916;anti-apoptosis;1.26738640104249e-07!GO:0006364;rRNA processing;1.27134222651193e-07!GO:0051170;nuclear import;1.29329949616086e-07!GO:0006732;coenzyme metabolic process;1.36729066323535e-07!GO:0006163;purine nucleotide metabolic process;1.468320827658e-07!GO:0010468;regulation of gene expression;1.55982944097778e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.82514004423863e-07!GO:0016567;protein ubiquitination;2.13638889198925e-07!GO:0015986;ATP synthesis coupled proton transport;2.34425877188118e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.34425877188118e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.36366293585534e-07!GO:0065002;intracellular protein transport across a membrane;2.53196129352834e-07!GO:0006366;transcription from RNA polymerase II promoter;2.75799029218132e-07!GO:0043069;negative regulation of programmed cell death;2.91447170751389e-07!GO:0006606;protein import into nucleus;3.05612987143387e-07!GO:0051246;regulation of protein metabolic process;3.13610506502402e-07!GO:0009150;purine ribonucleotide metabolic process;3.58483976646615e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.93910455787622e-07!GO:0016192;vesicle-mediated transport;4.0553203340856e-07!GO:0043066;negative regulation of apoptosis;4.19452675466977e-07!GO:0009060;aerobic respiration;4.26626832104051e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.59131656377651e-07!GO:0016787;hydrolase activity;5.12308719854879e-07!GO:0006260;DNA replication;5.16182913472273e-07!GO:0044432;endoplasmic reticulum part;5.1646750401669e-07!GO:0003713;transcription coactivator activity;5.54175841172091e-07!GO:0051028;mRNA transport;5.93728907366438e-07!GO:0005783;endoplasmic reticulum;6.38619889992008e-07!GO:0046930;pore complex;6.75925333811609e-07!GO:0016310;phosphorylation;6.9753367562538e-07!GO:0006917;induction of apoptosis;8.39858672469782e-07!GO:0016564;transcription repressor activity;8.40011844439128e-07!GO:0000245;spliceosome assembly;8.45000168259648e-07!GO:0048523;negative regulation of cellular process;9.60354176687812e-07!GO:0000151;ubiquitin ligase complex;1.15590215072998e-06!GO:0006754;ATP biosynthetic process;1.25429067008161e-06!GO:0006753;nucleoside phosphate metabolic process;1.25429067008161e-06!GO:0012502;induction of programmed cell death;1.32843799989951e-06!GO:0016779;nucleotidyltransferase activity;1.40154612968942e-06!GO:0009055;electron carrier activity;1.43170310857249e-06!GO:0000278;mitotic cell cycle;1.84363902782603e-06!GO:0032774;RNA biosynthetic process;1.86569151304167e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.99817727826152e-06!GO:0015399;primary active transmembrane transporter activity;1.99817727826152e-06!GO:0007005;mitochondrion organization and biogenesis;2.28211126291078e-06!GO:0006351;transcription, DNA-dependent;2.36836892694805e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.39634764030103e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.41075227443963e-06!GO:0043065;positive regulation of apoptosis;2.41651108490708e-06!GO:0009056;catabolic process;2.47888488117809e-06!GO:0031324;negative regulation of cellular metabolic process;2.49964280796525e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.75729153558317e-06!GO:0051168;nuclear export;2.82945678708921e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.04293339936183e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.04798326606269e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.04798326606269e-06!GO:0045333;cellular respiration;3.05990600301448e-06!GO:0016740;transferase activity;3.33884589874861e-06!GO:0005789;endoplasmic reticulum membrane;3.43959092146797e-06!GO:0045259;proton-transporting ATP synthase complex;3.44067717338992e-06!GO:0043068;positive regulation of programmed cell death;3.66055859675013e-06!GO:0016563;transcription activator activity;3.79255764066471e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.98436111240392e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.98436111240392e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.41475129144516e-06!GO:0046914;transition metal ion binding;4.57589437389234e-06!GO:0051188;cofactor biosynthetic process;6.27829690523462e-06!GO:0045449;regulation of transcription;6.28240723209261e-06!GO:0046034;ATP metabolic process;6.4784348544071e-06!GO:0045786;negative regulation of progression through cell cycle;6.65911159682233e-06!GO:0003724;RNA helicase activity;6.72684829257567e-06!GO:0065009;regulation of a molecular function;6.76981854340877e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.1602078341059e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.76560632011978e-06!GO:0004812;aminoacyl-tRNA ligase activity;7.76560632011978e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.76560632011978e-06!GO:0009199;ribonucleoside triphosphate metabolic process;8.27397264353302e-06!GO:0009141;nucleoside triphosphate metabolic process;1.00297193308568e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.10346824368076e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.10346824368076e-05!GO:0030120;vesicle coat;1.29045141454539e-05!GO:0030662;coated vesicle membrane;1.29045141454539e-05!GO:0006613;cotranslational protein targeting to membrane;1.29045141454539e-05!GO:0043038;amino acid activation;1.43656767787235e-05!GO:0006418;tRNA aminoacylation for protein translation;1.43656767787235e-05!GO:0043039;tRNA aminoacylation;1.43656767787235e-05!GO:0048519;negative regulation of biological process;1.61554837087387e-05!GO:0016363;nuclear matrix;2.09383098459686e-05!GO:0019899;enzyme binding;2.21541643475256e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.23118581979828e-05!GO:0009892;negative regulation of metabolic process;2.29860812646538e-05!GO:0006099;tricarboxylic acid cycle;2.6898764796248e-05!GO:0046356;acetyl-CoA catabolic process;2.6898764796248e-05!GO:0048475;coated membrane;2.7117787374722e-05!GO:0030117;membrane coat;2.7117787374722e-05!GO:0000786;nucleosome;2.99708814686927e-05!GO:0005793;ER-Golgi intermediate compartment;3.10156942751958e-05!GO:0065007;biological regulation;3.45822154655943e-05!GO:0006084;acetyl-CoA metabolic process;4.38342898471674e-05!GO:0005770;late endosome;4.58801682196703e-05!GO:0043492;ATPase activity, coupled to movement of substances;4.90719045318867e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;4.97593512091437e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.14314801536931e-05!GO:0006401;RNA catabolic process;5.14314801536931e-05!GO:0006752;group transfer coenzyme metabolic process;5.17128138752623e-05!GO:0006461;protein complex assembly;5.57147204688354e-05!GO:0006355;regulation of transcription, DNA-dependent;5.88089731811649e-05!GO:0005762;mitochondrial large ribosomal subunit;6.17737915594044e-05!GO:0000315;organellar large ribosomal subunit;6.17737915594044e-05!GO:0003677;DNA binding;6.2243584464256e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;6.25313643261468e-05!GO:0005813;centrosome;6.6609878933189e-05!GO:0006612;protein targeting to membrane;6.72221742573301e-05!GO:0008234;cysteine-type peptidase activity;6.76412828580756e-05!GO:0016481;negative regulation of transcription;7.19524317437592e-05!GO:0005525;GTP binding;7.19524317437592e-05!GO:0022403;cell cycle phase;8.15505513087491e-05!GO:0009108;coenzyme biosynthetic process;8.30066291223078e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;8.56307557983942e-05!GO:0005773;vacuole;8.91822330446541e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.05314669955301e-05!GO:0003690;double-stranded DNA binding;9.31739486973485e-05!GO:0006310;DNA recombination;0.000112558659483204!GO:0051301;cell division;0.000123645572409179!GO:0005815;microtubule organizing center;0.000124022276335234!GO:0008186;RNA-dependent ATPase activity;0.000130190374097127!GO:0006402;mRNA catabolic process;0.00015121050886201!GO:0019843;rRNA binding;0.000152844210479732!GO:0007242;intracellular signaling cascade;0.000167092429814194!GO:0051187;cofactor catabolic process;0.000171044393588426!GO:0009109;coenzyme catabolic process;0.000172520964410695!GO:0008632;apoptotic program;0.000172751317921101!GO:0000087;M phase of mitotic cell cycle;0.000196255525022662!GO:0004674;protein serine/threonine kinase activity;0.000201304100326045!GO:0008168;methyltransferase activity;0.000205777872327038!GO:0044440;endosomal part;0.000214638002968521!GO:0010008;endosome membrane;0.000214638002968521!GO:0005885;Arp2/3 protein complex;0.00022448091775424!GO:0016741;transferase activity, transferring one-carbon groups;0.000232749440875204!GO:0006417;regulation of translation;0.0002386478882315!GO:0043623;cellular protein complex assembly;0.000243063620041821!GO:0060090;molecular adaptor activity;0.00024861331407646!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000255800554349205!GO:0043021;ribonucleoprotein binding;0.000274418958408702!GO:0000323;lytic vacuole;0.000276255057551651!GO:0005764;lysosome;0.000276255057551651!GO:0006352;transcription initiation;0.000287271813635902!GO:0007067;mitosis;0.000297218167618927!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000334573327674178!GO:0015992;proton transport;0.000342469186579276!GO:0042110;T cell activation;0.000343706029658204!GO:0006818;hydrogen transport;0.000351494663519418!GO:0003899;DNA-directed RNA polymerase activity;0.000389447834279756!GO:0004004;ATP-dependent RNA helicase activity;0.00039665173554813!GO:0044431;Golgi apparatus part;0.000404267746319815!GO:0003924;GTPase activity;0.000404893192159343!GO:0006261;DNA-dependent DNA replication;0.00040973608965135!GO:0030384;phosphoinositide metabolic process;0.000441694247805227!GO:0008654;phospholipid biosynthetic process;0.000449388233197229!GO:0003729;mRNA binding;0.000475198925529886!GO:0006891;intra-Golgi vesicle-mediated transport;0.000492803776468684!GO:0006611;protein export from nucleus;0.000523758306358325!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000623808517347427!GO:0005769;early endosome;0.000658340146890547!GO:0016251;general RNA polymerase II transcription factor activity;0.000659902614358861!GO:0032561;guanyl ribonucleotide binding;0.000693342835312864!GO:0019001;guanyl nucleotide binding;0.000693342835312864!GO:0051427;hormone receptor binding;0.000693650545589679!GO:0009615;response to virus;0.000698012442590598!GO:0000314;organellar small ribosomal subunit;0.00072756873003558!GO:0005763;mitochondrial small ribosomal subunit;0.00072756873003558!GO:0051252;regulation of RNA metabolic process;0.000745964971053333!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000774645415109533!GO:0005667;transcription factor complex;0.000783079720512958!GO:0031326;regulation of cellular biosynthetic process;0.000839648203574481!GO:0003714;transcription corepressor activity;0.000897020974621891!GO:0048471;perinuclear region of cytoplasm;0.000944366169090358!GO:0009117;nucleotide metabolic process;0.000986616973168994!GO:0005741;mitochondrial outer membrane;0.00112044468023704!GO:0005798;Golgi-associated vesicle;0.00120526578515543!GO:0046489;phosphoinositide biosynthetic process;0.00122070807892148!GO:0031072;heat shock protein binding;0.00126773296571669!GO:0035257;nuclear hormone receptor binding;0.00129244892748108!GO:0006650;glycerophospholipid metabolic process;0.0013139146550408!GO:0022890;inorganic cation transmembrane transporter activity;0.00138734586623394!GO:0006383;transcription from RNA polymerase III promoter;0.00140423889217763!GO:0006414;translational elongation;0.00144033184388731!GO:0016197;endosome transport;0.00148182006284393!GO:0019867;outer membrane;0.00151419169870315!GO:0000279;M phase;0.00167645815501845!GO:0048522;positive regulation of cellular process;0.00171845893640193!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00174090986960369!GO:0042802;identical protein binding;0.0017630781861292!GO:0043681;protein import into mitochondrion;0.0017630781861292!GO:0008033;tRNA processing;0.00180497699071053!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00188552376095168!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00188552376095168!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00188552376095168!GO:0051087;chaperone binding;0.00192650692186329!GO:0031968;organelle outer membrane;0.00212586466120301!GO:0004518;nuclease activity;0.00241185001002162!GO:0005774;vacuolar membrane;0.00242889779169884!GO:0005684;U2-dependent spliceosome;0.00249840771599341!GO:0015631;tubulin binding;0.00259039785451311!GO:0003678;DNA helicase activity;0.00269921794091994!GO:0003746;translation elongation factor activity;0.00270376942607725!GO:0009967;positive regulation of signal transduction;0.00272062992835443!GO:0003684;damaged DNA binding;0.00291895339261764!GO:0046474;glycerophospholipid biosynthetic process;0.00297030523055409!GO:0006302;double-strand break repair;0.00301232726802375!GO:0006289;nucleotide-excision repair;0.00313925905626711!GO:0051090;regulation of transcription factor activity;0.00341363022463458!GO:0008022;protein C-terminus binding;0.00347516415905267!GO:0006607;NLS-bearing substrate import into nucleus;0.003475945309839!GO:0048500;signal recognition particle;0.00350232869817055!GO:0000139;Golgi membrane;0.00377782138903331!GO:0004527;exonuclease activity;0.00381800642121992!GO:0005637;nuclear inner membrane;0.0038326579210499!GO:0050790;regulation of catalytic activity;0.00385339857973319!GO:0005070;SH3/SH2 adaptor activity;0.00388030744000878!GO:0045892;negative regulation of transcription, DNA-dependent;0.00396353089073079!GO:0043488;regulation of mRNA stability;0.00405675816743512!GO:0043487;regulation of RNA stability;0.00405675816743512!GO:0015630;microtubule cytoskeleton;0.00414781115434166!GO:0008047;enzyme activator activity;0.00416694449647632!GO:0051789;response to protein stimulus;0.00433559776948723!GO:0006986;response to unfolded protein;0.00433559776948723!GO:0019783;small conjugating protein-specific protease activity;0.0044483248236454!GO:0044452;nucleolar part;0.00449793056975993!GO:0007006;mitochondrial membrane organization and biogenesis;0.00455045179782269!GO:0051251;positive regulation of lymphocyte activation;0.00463094257822139!GO:0005657;replication fork;0.00468491389142808!GO:0051539;4 iron, 4 sulfur cluster binding;0.00479016110211825!GO:0048487;beta-tubulin binding;0.00486995607520195!GO:0005765;lysosomal membrane;0.00489741349302067!GO:0008312;7S RNA binding;0.00508791304825954!GO:0030658;transport vesicle membrane;0.00515750114071421!GO:0046822;regulation of nucleocytoplasmic transport;0.00517929545426871!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00523199453437075!GO:0015002;heme-copper terminal oxidase activity;0.00523199453437075!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00523199453437075!GO:0004129;cytochrome-c oxidase activity;0.00523199453437075!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00528224752452933!GO:0045047;protein targeting to ER;0.00528224752452933!GO:0044437;vacuolar part;0.00533287829467438!GO:0009889;regulation of biosynthetic process;0.00534277192440521!GO:0004843;ubiquitin-specific protease activity;0.00539434667574289!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0054958328949453!GO:0016584;nucleosome positioning;0.0055517939656431!GO:0003711;transcription elongation regulator activity;0.00555963684902393!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00580261091419848!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00580261091419848!GO:0032259;methylation;0.00596696676434767!GO:0031902;late endosome membrane;0.00606468851977823!GO:0006839;mitochondrial transport;0.00607595550836569!GO:0016272;prefoldin complex;0.00656010185092951!GO:0050811;GABA receptor binding;0.00661904921790643!GO:0006367;transcription initiation from RNA polymerase II promoter;0.006941187557338!GO:0006405;RNA export from nucleus;0.00721326257589661!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00735158241823904!GO:0045454;cell redox homeostasis;0.00747492832688795!GO:0043621;protein self-association;0.0076407207387514!GO:0006338;chromatin remodeling;0.00768810684395389!GO:0051059;NF-kappaB binding;0.00778209491453876!GO:0005669;transcription factor TFIID complex;0.00797195861153716!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00797203241076591!GO:0007264;small GTPase mediated signal transduction;0.00802355023015045!GO:0030518;steroid hormone receptor signaling pathway;0.00802418760641513!GO:0043414;biopolymer methylation;0.00805339179089582!GO:0050863;regulation of T cell activation;0.008419201725451!GO:0031625;ubiquitin protein ligase binding;0.00843204888063357!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0084650523772202!GO:0004221;ubiquitin thiolesterase activity;0.00859013861027035!GO:0016853;isomerase activity;0.00869505535784244!GO:0030118;clathrin coat;0.00869505535784244!GO:0051540;metal cluster binding;0.00890442998653076!GO:0051536;iron-sulfur cluster binding;0.00890442998653076!GO:0051052;regulation of DNA metabolic process;0.00924007555138327!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00929046071363979!GO:0005048;signal sequence binding;0.00949682366317417!GO:0000209;protein polyubiquitination;0.0102753163281666!GO:0016859;cis-trans isomerase activity;0.0103896725019042!GO:0007050;cell cycle arrest;0.0104517953809871!GO:0046649;lymphocyte activation;0.0104517953809871!GO:0051920;peroxiredoxin activity;0.0107215852223743!GO:0001667;ameboidal cell migration;0.0107331582444705!GO:0032027;myosin light chain binding;0.0107331582444705!GO:0046467;membrane lipid biosynthetic process;0.0108823202489815!GO:0051092;activation of NF-kappaB transcription factor;0.0109500685755589!GO:0042101;T cell receptor complex;0.0110785879165863!GO:0007265;Ras protein signal transduction;0.011161443394426!GO:0050852;T cell receptor signaling pathway;0.0112113185197125!GO:0006376;mRNA splice site selection;0.0114855220711234!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0114855220711234!GO:0019901;protein kinase binding;0.0116144199654938!GO:0006497;protein amino acid lipidation;0.0116571961369855!GO:0030660;Golgi-associated vesicle membrane;0.0117347251968786!GO:0050870;positive regulation of T cell activation;0.0121466578790992!GO:0050865;regulation of cell activation;0.0123443093194777!GO:0016605;PML body;0.0123529965854594!GO:0051249;regulation of lymphocyte activation;0.0124392426718533!GO:0006626;protein targeting to mitochondrion;0.0125518373181688!GO:0008624;induction of apoptosis by extracellular signals;0.0127300572802436!GO:0030521;androgen receptor signaling pathway;0.0135658612632724!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0135797946568454!GO:0008637;apoptotic mitochondrial changes;0.0135797946568454!GO:0005869;dynactin complex;0.0137124574957714!GO:0047485;protein N-terminus binding;0.0140586001172655!GO:0022415;viral reproductive process;0.0140586001172655!GO:0043433;negative regulation of transcription factor activity;0.0143267636443848!GO:0044438;microbody part;0.0144415538007847!GO:0044439;peroxisomal part;0.0144415538007847!GO:0033116;ER-Golgi intermediate compartment membrane;0.0144961490579108!GO:0000049;tRNA binding;0.0145642483074987!GO:0006506;GPI anchor biosynthetic process;0.0147656229399808!GO:0031124;mRNA 3'-end processing;0.0147796416545864!GO:0046966;thyroid hormone receptor binding;0.0148207418642288!GO:0004532;exoribonuclease activity;0.0148348707455198!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0148348707455198!GO:0051098;regulation of binding;0.0148482813493188!GO:0000287;magnesium ion binding;0.0150421463019443!GO:0009116;nucleoside metabolic process;0.0151612542641813!GO:0009165;nucleotide biosynthetic process;0.0153401095163904!GO:0016790;thiolester hydrolase activity;0.0162292233316195!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0163596717652805!GO:0051329;interphase of mitotic cell cycle;0.0163985680339411!GO:0008094;DNA-dependent ATPase activity;0.0164263411350051!GO:0019955;cytokine binding;0.0166907121024462!GO:0006284;base-excision repair;0.0169633852295609!GO:0030880;RNA polymerase complex;0.0170893681996148!GO:0019900;kinase binding;0.0171953311580593!GO:0043022;ribosome binding;0.0174295803910853!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0178689866709766!GO:0008017;microtubule binding;0.0180847768093475!GO:0006914;autophagy;0.018178553271096!GO:0006505;GPI anchor metabolic process;0.0181918123988666!GO:0051223;regulation of protein transport;0.0182590897359394!GO:0016763;transferase activity, transferring pentosyl groups;0.0183119438663992!GO:0051336;regulation of hydrolase activity;0.0183608072174682!GO:0000075;cell cycle checkpoint;0.0183836303630286!GO:0000738;DNA catabolic process, exonucleolytic;0.0184464675671653!GO:0004197;cysteine-type endopeptidase activity;0.018459600918665!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0184816768441626!GO:0051235;maintenance of localization;0.0184921418829904!GO:0006672;ceramide metabolic process;0.018494515162537!GO:0003725;double-stranded RNA binding;0.0191742998243891!GO:0031252;leading edge;0.0196231262814832!GO:0030522;intracellular receptor-mediated signaling pathway;0.0196231262814832!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0196231262814832!GO:0010257;NADH dehydrogenase complex assembly;0.0196231262814832!GO:0033108;mitochondrial respiratory chain complex assembly;0.0196231262814832!GO:0008097;5S rRNA binding;0.0199843269088803!GO:0030137;COPI-coated vesicle;0.0202188977978028!GO:0008276;protein methyltransferase activity;0.0207277292744907!GO:0051325;interphase;0.0209628455427626!GO:0031903;microbody membrane;0.0214395598542607!GO:0005778;peroxisomal membrane;0.0214395598542607!GO:0008408;3'-5' exonuclease activity;0.0214803329593554!GO:0004722;protein serine/threonine phosphatase activity;0.0214966283042248!GO:0030663;COPI coated vesicle membrane;0.0216409473649082!GO:0030126;COPI vesicle coat;0.0216409473649082!GO:0007034;vacuolar transport;0.0218408965981693!GO:0008287;protein serine/threonine phosphatase complex;0.0218408965981693!GO:0004177;aminopeptidase activity;0.0218857681518846!GO:0040029;regulation of gene expression, epigenetic;0.0219401326148327!GO:0006595;polyamine metabolic process;0.022193321473499!GO:0031982;vesicle;0.0223659843179102!GO:0015980;energy derivation by oxidation of organic compounds;0.0224177864425205!GO:0048518;positive regulation of biological process;0.0224762029661956!GO:0019904;protein domain specific binding;0.0225392213008135!GO:0008139;nuclear localization sequence binding;0.0226339147167055!GO:0016311;dephosphorylation;0.0228720123727633!GO:0022411;cellular component disassembly;0.0231618671942222!GO:0016791;phosphoric monoester hydrolase activity;0.0232980382529295!GO:0032508;DNA duplex unwinding;0.0235198215811086!GO:0032392;DNA geometric change;0.0235198215811086!GO:0030125;clathrin vesicle coat;0.0235198215811086!GO:0030665;clathrin coated vesicle membrane;0.0235198215811086!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0235666834319826!GO:0030833;regulation of actin filament polymerization;0.0239295754837445!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0244176826839347!GO:0008180;signalosome;0.0246129913602639!GO:0022406;membrane docking;0.0247690538869566!GO:0048278;vesicle docking;0.0247690538869566!GO:0000776;kinetochore;0.024864718321785!GO:0019210;kinase inhibitor activity;0.0250558421378184!GO:0030258;lipid modification;0.0251691078002504!GO:0030695;GTPase regulator activity;0.0251708539170745!GO:0008320;protein transmembrane transporter activity;0.025507413311881!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.025507413311881!GO:0006091;generation of precursor metabolites and energy;0.025721587198846!GO:0005521;lamin binding;0.0258287003884988!GO:0032940;secretion by cell;0.0272082965291139!GO:0031123;RNA 3'-end processing;0.0275423237531688!GO:0046983;protein dimerization activity;0.0275423237531688!GO:0048002;antigen processing and presentation of peptide antigen;0.027834671309103!GO:0005083;small GTPase regulator activity;0.0279080295760722!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0285038870878004!GO:0000428;DNA-directed RNA polymerase complex;0.0285038870878004!GO:0006904;vesicle docking during exocytosis;0.0291397139279907!GO:0001772;immunological synapse;0.0295569181654879!GO:0042158;lipoprotein biosynthetic process;0.0297524957268488!GO:0045603;positive regulation of endothelial cell differentiation;0.0309971455976052!GO:0005777;peroxisome;0.0311310653228493!GO:0042579;microbody;0.0311310653228493!GO:0031988;membrane-bound vesicle;0.0314746007103588!GO:0046979;TAP2 binding;0.0316398609704499!GO:0046977;TAP binding;0.0316398609704499!GO:0046978;TAP1 binding;0.0316398609704499!GO:0042608;T cell receptor binding;0.032716377612508!GO:0006518;peptide metabolic process;0.0327973565584753!GO:0032200;telomere organization and biogenesis;0.0328395687103149!GO:0000723;telomere maintenance;0.0328395687103149!GO:0005819;spindle;0.0329745265115593!GO:0031647;regulation of protein stability;0.0334573110624974!GO:0022884;macromolecule transmembrane transporter activity;0.0334678290527763!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0334678290527763!GO:0004860;protein kinase inhibitor activity;0.0336134233472342!GO:0003682;chromatin binding;0.0336740520852466!GO:0042393;histone binding;0.0336740520852466!GO:0005832;chaperonin-containing T-complex;0.033904859458567!GO:0009112;nucleobase metabolic process;0.0342730588468354!GO:0006144;purine base metabolic process;0.034394735466757!GO:0046426;negative regulation of JAK-STAT cascade;0.035025794169214!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0350566812105274!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0350566812105274!GO:0000090;mitotic anaphase;0.0351319970392709!GO:0051322;anaphase;0.0351319970392709!GO:0043281;regulation of caspase activity;0.0352053118379808!GO:0046519;sphingoid metabolic process;0.0353455802195903!GO:0004576;oligosaccharyl transferase activity;0.0355865358864932!GO:0015923;mannosidase activity;0.0356413635466572!GO:0019976;interleukin-2 binding;0.0359441546427874!GO:0004911;interleukin-2 receptor activity;0.0359441546427874!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0360843874285623!GO:0045045;secretory pathway;0.0366270259742085!GO:0006919;caspase activation;0.036894416511302!GO:0048468;cell development;0.0373357369998872!GO:0016788;hydrolase activity, acting on ester bonds;0.0380874893316121!GO:0006007;glucose catabolic process;0.0381299540018133!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0383359438112666!GO:0000178;exosome (RNase complex);0.0383359438112666!GO:0007021;tubulin folding;0.0396915045606411!GO:0004003;ATP-dependent DNA helicase activity;0.0398190889036287!GO:0004659;prenyltransferase activity;0.0400250926254557!GO:0032984;macromolecular complex disassembly;0.0409798003620438!GO:0000119;mediator complex;0.0410044308085218!GO:0006354;RNA elongation;0.0413684004163191!GO:0000303;response to superoxide;0.0415477006197203!GO:0007004;telomere maintenance via telomerase;0.0419175422431123!GO:0046128;purine ribonucleoside metabolic process;0.0426253147634592!GO:0042278;purine nucleoside metabolic process;0.0426253147634592!GO:0000082;G1/S transition of mitotic cell cycle;0.0430680577208169!GO:0008538;proteasome activator activity;0.0435815469093355!GO:0030867;rough endoplasmic reticulum membrane;0.0438758752011751!GO:0045947;negative regulation of translational initiation;0.0441839619142301!GO:0046483;heterocycle metabolic process;0.0442732834087427!GO:0016585;chromatin remodeling complex;0.0445031403829723!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0449164647444202!GO:0002456;T cell mediated immunity;0.0457764308385983!GO:0035258;steroid hormone receptor binding;0.0458716539242579!GO:0030119;AP-type membrane coat adaptor complex;0.0458879079770166!GO:0030132;clathrin coat of coated pit;0.0463683269541531!GO:0005784;translocon complex;0.0467530987058629!GO:0051219;phosphoprotein binding;0.0476621203323918!GO:0005096;GTPase activator activity;0.0477877878453707!GO:0004721;phosphoprotein phosphatase activity;0.0479769500234693!GO:0031410;cytoplasmic vesicle;0.0482251351364375!GO:0033549;MAP kinase phosphatase activity;0.0489783579955539!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0489783579955539!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0491198988379066!GO:0008250;oligosaccharyl transferase complex;0.0493412685019795!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0497550120223323!GO:0005092;GDP-dissociation inhibitor activity;0.0499937379566728
|sample_id=11797
|sample_id=11797
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=PAX3,7:3.28867087669;TLX2:2.80463257436;FOX{D1,D2}:2.77074305885;CDX1,2,4:2.76747509883;ELF1,2,4:2.44629727322;FOX{F1,F2,J1}:2.42684549298;RUNX1..3:2.41580344805;BPTF:2.27366439475;PDX1:2.20152684233;RORA:2.13839524675;CREB1:2.01623540344;DMAP1_NCOR{1,2}_SMARC:1.96765071187;ATF5_CREB3:1.93932508059;ATF4:1.89049253867;FOX{I1,J2}:1.86543282067;ETS1,2:1.63309360498;ZBTB16:1.63291159507;FOXO1,3,4:1.61625985357;HMX1:1.49701679386;PBX1:1.48622568886;SPI1:1.29897251013;RFX2..5_RFXANK_RFXAP:1.23976740282;FOXN1:1.23969788011;IRF1,2:1.21451894457;ELK1,4_GABP{A,B1}:1.12001266959;JUN:1.08915395634;NANOG{mouse}:1.05686420255;ATF2:0.994952463306;GATA6:0.959783421863;TGIF1:0.924244986004;PAX2:0.912115185959;STAT1,3:0.857861030396;LEF1_TCF7_TCF7L1,2:0.85444564774;SPIB:0.831454727976;PAX4:0.747032634532;PAX6:0.735744805413;ALX1:0.612241568963;YY1:0.597334798723;NFIL3:0.593413032859;POU1F1:0.583226300023;BREu{core}:0.55784086732;FOXQ1:0.552788486522;SNAI1..3:0.525345818038;HIF1A:0.521468273518;NFIX:0.518414219515;MYOD1:0.517416007773;IRF7:0.510973576651;ZEB1:0.507002931673;NKX6-1,2:0.500969453361;CUX2:0.492195965854;IKZF2:0.488276108835;ATF6:0.463742166541;NKX3-1:0.432927612687;NKX2-2,8:0.431873170734;PITX1..3:0.429150385545;FOXP1:0.426217566793;T:0.409074567174;CRX:0.391966923577;NFKB1_REL_RELA:0.381571922617;SPZ1:0.360191852369;SOX2:0.353053815469;SOX5:0.345695763781;NFATC1..3:0.335733757237;RFX1:0.313757356015;MAFB:0.292441286262;LMO2:0.19500744524;POU2F1..3:0.193483282761;STAT5{A,B}:0.187792548111;EP300:0.163830001881;SREBF1,2:0.162183986502;HES1:0.144653868688;MYB:0.0818832705782;OCT4_SOX2{dimer}:0.0758742226984;E2F1..5:-0.0228860323993;AHR_ARNT_ARNT2:-0.0328447063724;VSX1,2:-0.0688241847705;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0832429066251;TAL1_TCF{3,4,12}:-0.0887060574938;EVI1:-0.0973076866633;NR5A1,2:-0.163675266031;FOXP3:-0.166990684272;NANOG:-0.186522761895;NRF1:-0.19906525748;NFY{A,B,C}:-0.199894593456;FOXA2:-0.215945916036;NFE2L1:-0.222982079552;STAT2,4,6:-0.251651842627;NHLH1,2:-0.265272889966;TBX4,5:-0.286498295662;ZNF384:-0.291583663248;HOX{A6,A7,B6,B7}:-0.296633242571;AIRE:-0.29679672263;HBP1_HMGB_SSRP1_UBTF:-0.303918884697;NKX2-1,4:-0.314032296592;HAND1,2:-0.320771391336;GFI1:-0.336376423829;HMGA1,2:-0.338171468282;FOSL2:-0.369377116605;ZNF143:-0.371789216642;AR:-0.386459114198;HNF4A_NR2F1,2:-0.390625329245;HLF:-0.3954383308;FOS_FOS{B,L1}_JUN{B,D}:-0.404240482213;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.408133445376;ALX4:-0.433684058134;GLI1..3:-0.460780732505;HNF1A:-0.476326455903;MYFfamily:-0.493659606913;BACH2:-0.501861460531;ZNF148:-0.525095433699;GCM1,2:-0.545964011845;CEBPA,B_DDIT3:-0.556640094569;POU3F1..4:-0.556780547703;PAX8:-0.56711197783;NFE2:-0.604786240986;TOPORS:-0.618441965147;DBP:-0.640218795067;HOXA9_MEIS1:-0.668554081634;ARID5B:-0.714286235196;NFE2L2:-0.73412016915;FOXM1:-0.738391725282;SMAD1..7,9:-0.762403950283;SRF:-0.763881731892;ESRRA:-0.764187175932;MEF2{A,B,C,D}:-0.774861395847;PAX5:-0.780684333681;ZNF423:-0.781110382653;EGR1..3:-0.803162629548;RBPJ:-0.808231546937;LHX3,4:-0.824049296151;FOXD3:-0.827436316266;PRRX1,2:-0.835364402033;GFI1B:-0.850681512717;RREB1:-0.879592613322;MTF1:-0.891707851232;ONECUT1,2:-0.897914062289;MYBL2:-0.904116246282;MED-1{core}:-0.904292289824;ADNP_IRX_SIX_ZHX:-0.955473307714;SOX{8,9,10}:-0.969347110582;ZNF238:-0.970481540146;RXRA_VDR{dimer}:-1.02463596728;UFEwm:-1.04275609776;ZFP161:-1.04410911953;bHLH_family:-1.0784745637;NR1H4:-1.09157646166;TFDP1:-1.11942661613;REST:-1.12721129519;MTE{core}:-1.14511055081;MZF1:-1.18562025254;HOX{A5,B5}:-1.19669726243;POU6F1:-1.20993289828;TFAP4:-1.21036938043;ZBTB6:-1.21883455714;SOX17:-1.23130943515;POU5F1:-1.25745144611;ESR1:-1.25862014656;CDC5L:-1.27040246926;TP53:-1.2957728481;NR6A1:-1.31945162535;PRDM1:-1.33427164508;TFCP2:-1.33543265135;NKX2-3_NKX2-5:-1.3595793539;ZIC1..3:-1.39161467591;GATA4:-1.41296222772;NR3C1:-1.44167225088;TBP:-1.4831660824;FOXL1:-1.50803069211;PATZ1:-1.50818022117;XCPE1{core}:-1.52886106091;MAZ:-1.53776850066;EBF1:-1.54494160623;HIC1:-1.55203785839;GTF2I:-1.55824772692;PPARG:-1.57921395119;TFAP2B:-1.6223595474;TEF:-1.63011744331;TEAD1:-1.69451939953;TFAP2{A,C}:-1.69925186001;TLX1..3_NFIC{dimer}:-1.73887540832;EN1,2:-1.74179112567;SP1:-1.80713602326;HOX{A4,D4}:-1.8173192316;KLF4:-1.84100073253;RXR{A,B,G}:-1.87629111794;GTF2A1,2:-1.87653593449;NKX3-2:-1.94434825205;GZF1:-1.94640842971;HSF1,2:-1.95131720361;PAX1,9:-1.99159343778;XBP1:-2.02125139378;IKZF1:-2.53441438489
|top_motifs=PAX3,7:3.28867087669;TLX2:2.80463257436;FOX{D1,D2}:2.77074305885;CDX1,2,4:2.76747509883;ELF1,2,4:2.44629727322;FOX{F1,F2,J1}:2.42684549298;RUNX1..3:2.41580344805;BPTF:2.27366439475;PDX1:2.20152684233;RORA:2.13839524675;CREB1:2.01623540344;DMAP1_NCOR{1,2}_SMARC:1.96765071187;ATF5_CREB3:1.93932508059;ATF4:1.89049253867;FOX{I1,J2}:1.86543282067;ETS1,2:1.63309360498;ZBTB16:1.63291159507;FOXO1,3,4:1.61625985357;HMX1:1.49701679386;PBX1:1.48622568886;SPI1:1.29897251013;RFX2..5_RFXANK_RFXAP:1.23976740282;FOXN1:1.23969788011;IRF1,2:1.21451894457;ELK1,4_GABP{A,B1}:1.12001266959;JUN:1.08915395634;NANOG{mouse}:1.05686420255;ATF2:0.994952463306;GATA6:0.959783421863;TGIF1:0.924244986004;PAX2:0.912115185959;STAT1,3:0.857861030396;LEF1_TCF7_TCF7L1,2:0.85444564774;SPIB:0.831454727976;PAX4:0.747032634532;PAX6:0.735744805413;ALX1:0.612241568963;YY1:0.597334798723;NFIL3:0.593413032859;POU1F1:0.583226300023;BREu{core}:0.55784086732;FOXQ1:0.552788486522;SNAI1..3:0.525345818038;HIF1A:0.521468273518;NFIX:0.518414219515;MYOD1:0.517416007773;IRF7:0.510973576651;ZEB1:0.507002931673;NKX6-1,2:0.500969453361;CUX2:0.492195965854;IKZF2:0.488276108835;ATF6:0.463742166541;NKX3-1:0.432927612687;NKX2-2,8:0.431873170734;PITX1..3:0.429150385545;FOXP1:0.426217566793;T:0.409074567174;CRX:0.391966923577;NFKB1_REL_RELA:0.381571922617;SPZ1:0.360191852369;SOX2:0.353053815469;SOX5:0.345695763781;NFATC1..3:0.335733757237;RFX1:0.313757356015;MAFB:0.292441286262;LMO2:0.19500744524;POU2F1..3:0.193483282761;STAT5{A,B}:0.187792548111;EP300:0.163830001881;SREBF1,2:0.162183986502;HES1:0.144653868688;MYB:0.0818832705782;OCT4_SOX2{dimer}:0.0758742226984;E2F1..5:-0.0228860323993;AHR_ARNT_ARNT2:-0.0328447063724;VSX1,2:-0.0688241847705;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0832429066251;TAL1_TCF{3,4,12}:-0.0887060574938;EVI1:-0.0973076866633;NR5A1,2:-0.163675266031;FOXP3:-0.166990684272;NANOG:-0.186522761895;NRF1:-0.19906525748;NFY{A,B,C}:-0.199894593456;FOXA2:-0.215945916036;NFE2L1:-0.222982079552;STAT2,4,6:-0.251651842627;NHLH1,2:-0.265272889966;TBX4,5:-0.286498295662;ZNF384:-0.291583663248;HOX{A6,A7,B6,B7}:-0.296633242571;AIRE:-0.29679672263;HBP1_HMGB_SSRP1_UBTF:-0.303918884697;NKX2-1,4:-0.314032296592;HAND1,2:-0.320771391336;GFI1:-0.336376423829;HMGA1,2:-0.338171468282;FOSL2:-0.369377116605;ZNF143:-0.371789216642;AR:-0.386459114198;HNF4A_NR2F1,2:-0.390625329245;HLF:-0.3954383308;FOS_FOS{B,L1}_JUN{B,D}:-0.404240482213;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.408133445376;ALX4:-0.433684058134;GLI1..3:-0.460780732505;HNF1A:-0.476326455903;MYFfamily:-0.493659606913;BACH2:-0.501861460531;ZNF148:-0.525095433699;GCM1,2:-0.545964011845;CEBPA,B_DDIT3:-0.556640094569;POU3F1..4:-0.556780547703;PAX8:-0.56711197783;NFE2:-0.604786240986;TOPORS:-0.618441965147;DBP:-0.640218795067;HOXA9_MEIS1:-0.668554081634;ARID5B:-0.714286235196;NFE2L2:-0.73412016915;FOXM1:-0.738391725282;SMAD1..7,9:-0.762403950283;SRF:-0.763881731892;ESRRA:-0.764187175932;MEF2{A,B,C,D}:-0.774861395847;PAX5:-0.780684333681;ZNF423:-0.781110382653;EGR1..3:-0.803162629548;RBPJ:-0.808231546937;LHX3,4:-0.824049296151;FOXD3:-0.827436316266;PRRX1,2:-0.835364402033;GFI1B:-0.850681512717;RREB1:-0.879592613322;MTF1:-0.891707851232;ONECUT1,2:-0.897914062289;MYBL2:-0.904116246282;MED-1{core}:-0.904292289824;ADNP_IRX_SIX_ZHX:-0.955473307714;SOX{8,9,10}:-0.969347110582;ZNF238:-0.970481540146;RXRA_VDR{dimer}:-1.02463596728;UFEwm:-1.04275609776;ZFP161:-1.04410911953;bHLH_family:-1.0784745637;NR1H4:-1.09157646166;TFDP1:-1.11942661613;REST:-1.12721129519;MTE{core}:-1.14511055081;MZF1:-1.18562025254;HOX{A5,B5}:-1.19669726243;POU6F1:-1.20993289828;TFAP4:-1.21036938043;ZBTB6:-1.21883455714;SOX17:-1.23130943515;POU5F1:-1.25745144611;ESR1:-1.25862014656;CDC5L:-1.27040246926;TP53:-1.2957728481;NR6A1:-1.31945162535;PRDM1:-1.33427164508;TFCP2:-1.33543265135;NKX2-3_NKX2-5:-1.3595793539;ZIC1..3:-1.39161467591;GATA4:-1.41296222772;NR3C1:-1.44167225088;TBP:-1.4831660824;FOXL1:-1.50803069211;PATZ1:-1.50818022117;XCPE1{core}:-1.52886106091;MAZ:-1.53776850066;EBF1:-1.54494160623;HIC1:-1.55203785839;GTF2I:-1.55824772692;PPARG:-1.57921395119;TFAP2B:-1.6223595474;TEF:-1.63011744331;TEAD1:-1.69451939953;TFAP2{A,C}:-1.69925186001;TLX1..3_NFIC{dimer}:-1.73887540832;EN1,2:-1.74179112567;SP1:-1.80713602326;HOX{A4,D4}:-1.8173192316;KLF4:-1.84100073253;RXR{A,B,G}:-1.87629111794;GTF2A1,2:-1.87653593449;NKX3-2:-1.94434825205;GZF1:-1.94640842971;HSF1,2:-1.95131720361;PAX1,9:-1.99159343778;XBP1:-2.02125139378;IKZF1:-2.53441438489
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11797-124C6;search_select_hide=table117:FF:11797-124C6
}}
}}

Latest revision as of 18:21, 4 June 2020

Name:CD4+CD25+CD45RA- memory regulatory T cells, donor2
Species:Human (Homo sapiens)
Library ID:CNhs13206
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age23
cell typeT cell
cell lineNA
companyNA
collaborationMichael Rehli (University of Regensberg)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number23
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005355
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13206 CAGE DRX008185 DRR009057
Accession ID Hg19

Library idBAMCTSS
CNhs13206 DRZ000482 DRZ001867
Accession ID Hg38

Library idBAMCTSS
CNhs13206 DRZ011832 DRZ013217
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.974
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.168
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.157
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.184
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.367
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0.276
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.159
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.276
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.675
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.354
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.83
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.347
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0869
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0484
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.159
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.407
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.613
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.563
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0875
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.557
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.636
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.269
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.678
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.861
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.636
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.523
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.484
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.488
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.725
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.159
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.909
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.221
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340.0869
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.0869
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13206

Jaspar motifP-value
MA0002.22.29387e-6
MA0003.10.878
MA0004.10.836
MA0006.10.262
MA0007.10.896
MA0009.10.15
MA0014.10.888
MA0017.10.32
MA0018.21.19082e-5
MA0019.10.928
MA0024.10.655
MA0025.10.368
MA0027.10.874
MA0028.16.5754e-5
MA0029.10.266
MA0030.10.0146
MA0031.15.38778e-4
MA0035.20.0675
MA0038.10.103
MA0039.20.921
MA0040.10.953
MA0041.10.383
MA0042.10.892
MA0043.10.14
MA0046.10.232
MA0047.20.0707
MA0048.10.746
MA0050.13.74452e-8
MA0051.10.00277
MA0052.10.00466
MA0055.10.942
MA0057.10.669
MA0058.10.705
MA0059.10.556
MA0060.10.16
MA0061.10.0112
MA0062.24.69354e-15
MA0065.20.132
MA0066.10.241
MA0067.10.0239
MA0068.10.719
MA0069.10.72
MA0070.10.641
MA0071.10.591
MA0072.10.0724
MA0073.10.904
MA0074.10.429
MA0076.15.9273e-7
MA0077.10.0273
MA0078.10.655
MA0079.20.353
MA0080.24.29838e-11
MA0081.10.0206
MA0083.10.04
MA0084.10.401
MA0087.10.563
MA0088.10.279
MA0090.11.43113e-4
MA0091.10.934
MA0092.10.978
MA0093.10.946
MA0099.20.00646
MA0100.10.556
MA0101.10.694
MA0102.20.538
MA0103.10.112
MA0104.20.238
MA0105.12.37556e-6
MA0106.10.209
MA0107.10.962
MA0108.21.03349e-8
MA0111.10.169
MA0112.20.298
MA0113.10.801
MA0114.10.53
MA0115.10.619
MA0116.11.69905e-4
MA0117.10.114
MA0119.10.536
MA0122.10.578
MA0124.10.401
MA0125.10.172
MA0131.10.17
MA0135.10.414
MA0136.18.09804e-22
MA0137.20.842
MA0138.20.317
MA0139.10.027
MA0140.10.0532
MA0141.10.76
MA0142.10.263
MA0143.10.493
MA0144.10.981
MA0145.10.308
MA0146.10.638
MA0147.10.207
MA0148.10.363
MA0149.10.0899
MA0150.10.975
MA0152.10.0135
MA0153.10.119
MA0154.10.0378
MA0155.10.364
MA0156.11.09838e-16
MA0157.15.76995e-4
MA0159.10.295
MA0160.10.748
MA0162.10.933
MA0163.11.12192e-7
MA0164.10.466
MA0258.10.275
MA0259.10.316



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13206

Novel motifP-value
10.279
100.0112
1000.684
1010.203
1020.746
1030.328
1040.813
1050.286
1060.344
1070.0422
1080.677
1090.0818
110.0892
1100.683
1110.637
1120.477
1130.358
1140.259
1150.44
1160.548
1170.00275
1180.284
1190.713
120.842
1200.588
1210.822
1220.706
1230.0015
1240.293
1250.835
1260.553
1270.807
1280.99
1290.794
130.511
1300.372
1310.861
1320.284
1330.992
1340.9
1350.885
1360.8
1370.0594
1380.313
1390.0908
140.484
1400.124
1410.439
1420.535
1430.00171
1440.927
1450.605
1460.413
1470.0576
1480.0485
1490.69
150.107
1500.637
1510.596
1520.555
1530.751
1540.477
1550.00679
1560.49
1570.186
1580.0437
1590.17
160.836
1600.697
1610.896
1620.0289
1630.625
1640.0533
1650.586
1660.461
1670.161
1680.752
1690.852
170.938
180.806
190.228
20.639
200.456
210.672
220.584
230.552
240.765
250.056
260.312
270.42
280.582
290.00597
30.112
300.122
310.808
320.263
330.192
340.423
350.19
360.0273
370.18
380.918
390.41
40.94
400.534
410.175
420.116
430.333
440.505
450.354
460.26
470.0947
480.229
490.114
50.357
500.427
510.709
520.394
530.47
540.924
550.742
560.86
570.514
580.0934
590.892
60.987
600.398
610.0991
620.0823
630.899
640.406
650.953
660.792
670.775
680.642
690.643
70.214
700.0179
710.0469
720.0406
730.55
740.622
750.0188
760.154
770.105
780.171
790.685
80.967
800.0194
810.373
820.0923
830.541
840.462
850.897
860.103
870.825
880.938
890.139
90.931
900.0358
910.686
920.387
930.815
940.0998
950.0198
960.224
970.296
980.0844
994.02007e-4



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13206


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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