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FFCP PHASE1:Mm9::chr11:120582857..120582878,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=170758
|EntrezGene=170758
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=A2AC13
|UniProt=A2AC13
|association_with_transcript=-8bp_to_ENSMUST00000142229_5end
|association_with_transcript=-8bp_to_ENSMUST00000142229_5end
|cluster_id=chr11:120582857..120582878,+
|description=CAGE_peak_2_at_Rac3_5end
|description=CAGE_peak_2_at_Rac3_5end
|id=chr11:120582857..120582878,+
|id=chr11:120582857..120582878,+
|ontology_enrichment_celltype=CL:0000221!7.59e-16!44;CL:0000133!7.59e-16!44;CL:0002319!1.35e-15!43;CL:0000117!2.79e-15!23;CL:0000337!2.79e-15!23;CL:0000540!4.42e-13!33;CL:0000047!4.42e-13!33;CL:0000031!4.42e-13!33;CL:0000404!4.42e-13!33;CL:0000055!2.07e-12!50;CL:0000393!1.21e-10!39;CL:0000211!1.21e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.90e-17,23;CL:0000337,7.90e-17,23;CL:0000221,5.78e-16,44;CL:0000133,5.78e-16,44;CL:0002319,1.10e-15,43;CL:0000540,2.73e-13,33;CL:0000047,2.73e-13,33;CL:0000031,2.73e-13,33;CL:0000404,2.73e-13,33;CL:0000393,1.92e-10,39;CL:0000211,1.92e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.67e-26!73;UBERON:0005743!7.67e-26!73;UBERON:0000073!3.15e-25!75;UBERON:0001016!3.15e-25!75;UBERON:0004121!4.41e-24!102;UBERON:0000924!4.41e-24!102;UBERON:0006601!4.41e-24!102;UBERON:0001049!2.00e-20!52;UBERON:0005068!2.00e-20!52;UBERON:0006241!2.00e-20!52;UBERON:0007135!2.00e-20!52;UBERON:0002346!1.05e-19!71;UBERON:0003075!1.05e-19!71;UBERON:0007284!1.05e-19!71;UBERON:0000033!3.35e-19!63;UBERON:0000955!8.98e-19!50;UBERON:0006238!8.98e-19!50;UBERON:0002616!1.25e-18!49;UBERON:0002020!9.38e-17!34;UBERON:0003056!2.16e-16!49;UBERON:0003080!9.95e-16!40;UBERON:0002780!3.55e-15!39;UBERON:0001890!3.55e-15!39;UBERON:0006240!3.55e-15!39;UBERON:0002791!2.78e-13!29;UBERON:0003528!2.78e-13!29;UBERON:0001893!2.78e-13!29;UBERON:0000956!5.62e-09!21;UBERON:0001869!5.62e-09!21;UBERON:0000203!5.62e-09!21;UBERON:0000153!9.54e-09!94;UBERON:0007811!1.86e-08!86;UBERON:0002619!1.30e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.88e-27,73;UBERON:0001016,2.37e-26,75;UBERON:0004121,9.37e-25,95;UBERON:0000924,9.37e-25,95;UBERON:0006601,9.37e-25,95;UBERON:0000073,1.45e-24,54;UBERON:0001049,1.47e-22,52;UBERON:0005068,1.47e-22,52;UBERON:0006241,1.47e-22,52;UBERON:0007135,1.47e-22,52;UBERON:0002346,2.26e-22,64;UBERON:0003075,2.26e-22,64;UBERON:0007284,2.26e-22,64;UBERON:0010371,8.43e-21,73;UBERON:0000955,9.51e-19,47;UBERON:0006238,9.51e-19,47;UBERON:0002616,1.37e-18,46;UBERON:0002020,1.81e-18,34;UBERON:0003056,7.12e-18,49;UBERON:0003080,2.51e-17,40;UBERON:0002780,1.03e-16,39;UBERON:0001890,1.03e-16,39;UBERON:0006240,1.03e-16,39;UBERON:0003528,1.33e-14,29;UBERON:0002791,1.33e-14,29;UBERON:0001893,1.33e-14,29;UBERON:0010314,1.51e-11,92;UBERON:0000956,8.18e-10,21;UBERON:0001869,8.18e-10,21;UBERON:0000203,8.18e-10,21;UBERON:0002619,2.68e-08,17
|phase1_expression=5.12476310735341,0,0,0,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0.68822784320151,0.57423196411502,0,0.215471232685889,0.760093677825496,0.252030129759931,0.665191531965914,0,0,15.8481681015439,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.811015449756117,1.28482726513177,12.5182615095686,3.2703773457067,4.83309602015838,5.24960727500565,5.5994568650145,11.5002051491977,0,0,0,0,1.14613375975503,1.54701627683233,54.827760892951,68.2398363260922,76.6935998242477,5.42151251310611,6.22506357277798,5.39939830368839,6.92206453796882,6.3943210345149,7.19040265244171,6.53171119046643,5.08079100311541,9.99043943654511,7.99234853135252,76.5544638202194,61.4014543845486,10.1667363348412,8.14686503655009,14.7075005857603,17.6185409599022,9.95961237064464,8.75557239560588,58.5575117522061,65.5051528193253,48.4449434617787,15.6342479440773,21.9477417912355,11.7654650788144,71.0054890991539,59.3689908932259,63.9350099180781,0.832988126665025,1.058001841495,0.289864488701678,0,0,0,0,0,0.280888840263504,2.21559419351475,1.81850203222008,1.41335829804136,4.64783285263046,0,0,0,1.73192832808971,2.02687892380079,0.505524445014783,0.11418387971906,0,0.593768556259299,2.60227990149204,1.52232739156071,1.38369298353635,3.01445281105245,0.940709657085638,0.502666365318702,3.70792451601561,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,3.80615036115011,1.04723353406728,0,0,0,0,9.13722900369418,2.28750301409313,22.6177833803156,3.12883776346098,2.04572365864264,7.89594569326328,3.40706652442291,1.83310854930569,0.373220911830279,0.252722758433675,0.420883711772948,2.34216797332867,5.51765050640335,5.76198815377118,4.06903008156431,3.33378845841506,2.562274405697,4.49768277886698,1.29351685369508,3.23351989399263,2.64748512234947,2.81521798662318,4.82230611340665,1.39023624612799,1.39300866608867,2.05782136407943,2.18937693500343,0,0,0,0,0.703578179943289,0.540186184383045,0.473489471170421,0.393528463494808,0,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,2.3131894342054,22.1244916615462,0.330418782983798,0,1.49301775374664,0.928946687441754,1.9330119198314,0.80673409849337,0.667134131534611,1.90225626112559,0.949058123089023,0.988193728344065,0.502670417600539,0.994782360205754,1.16978452271472,0,0.648414149624083,0.199141273254367,2.65535061334314,1.5994791765362,1.1270773567308,1.01825663922657,2.32742984601151,1.8936671370386,1.01178459398812,0.590440591918409,0.627994911365499,0.246794327843601,0,0.166845105716094,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0,0,0,0.739012760666419,4.35830247072115,2.77040459951444,2.71592137240301,2.81628297946203,1.84256883185997,1.6663054862021,0.975668239288994,0.630540576424764,0.8858587585951,1.2756381492599,0.491589944147214,0.690739927463582,0.723245292907558,0,1.63171705145613,0.491764273019036,1.93155722413313,5.45872005958493,3.16471553798949,0,0,0.94652465824877,1.56175497718655,2.36965737506079,0.716906393857656,1.55959071857676,2.83076530788832,0.404810701674894,2.92255857911312,1.97643888973262,3.21321316421807,1.27746076687442,4.98583690268315,3.25773918707152,1.64970122972535,0,1.69946445308487,1.81394134178851,0.943025398779491,0.885905678642318,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,1.36175842301515,3.24109969256358,5.43306471887569,2.14337035031592,1.95074257006501,6.24290861607247,4.77192159746151,7.00269382963578,0,0.63549621259146,4.19003956304428,1.15420377059036,1.45317984026315,1.02531972377865,0.835606408021955,1.31312719796049,0.291480836629851,2.41052892613663,0,1.857481811669,0.925972636848558,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,2.05618395827738,2.23651413839534,1.51207477150522,1.46361807210128,1.31017538247707,0.674321731924103,0.909188012978695,0,0.388844919875379,0.621339313086926,0,1.34564891439581,1.48912641411388,1.16670713006429,2.71235629303235,2.36538575687089,1.87771581833206,0.781226309063701,0.524296722128554,0.483168241652012,0,0.632022241256357,2.22997736819181,1.64337531463724,0.51968329191118,0.716106782669926,0.39736270956253,0.360586348559907,0.886137163047463,0.100966449948148,0.381034033274999,0,0.584747284438515,0.192423683280659,0,0.453460767230423,4.43971906748129,0.986852422704233,1.84673078000486,0.19318959403219,0.563047426353546,1.64836461840539,1.71494703263253,5.01572104035363,11.8597886949584,11.5081309126794,17.7597609166213,9.96748457593388,5.48066015816514,8.3093328712867,5.40018000185445,3.60256962579376,4.07828168085784,2.07104124700728,2.49089634202024,3.99024873401031,6.82934423016537,5.34834777550247,6.28839487883947,6.61836630420051,6.88964856185007,7.0051919461224,5.45562656306086,5.30664144703975,7.09742039692671,2.64076877940507,5.3375659257833,5.50616310681876,6.31790158511746,5.23923060411381,6.605406578856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|phase1_expression=5.12476310735341,0,0,0,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0.68822784320151,0.57423196411502,0,0.215471232685889,0.760093677825496,0.252030129759931,0.665191531965914,0,0,15.8481681015439,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.811015449756117,1.28482726513177,12.5182615095686,3.2703773457067,4.83309602015838,5.24960727500565,5.5994568650145,11.5002051491977,0,0,0,0,1.14613375975503,1.54701627683233,54.827760892951,68.2398363260922,76.6935998242477,5.42151251310611,6.22506357277798,5.39939830368839,6.92206453796882,6.3943210345149,7.19040265244171,6.53171119046643,5.08079100311541,9.99043943654511,7.99234853135252,76.5544638202194,61.4014543845486,10.1667363348412,8.14686503655009,14.7075005857603,17.6185409599022,9.95961237064464,8.75557239560588,58.5575117522061,65.5051528193253,48.4449434617787,15.6342479440773,21.9477417912355,11.7654650788144,71.0054890991539,59.3689908932259,63.9350099180781,0.832988126665025,1.058001841495,0.289864488701678,0,0,0,0,0,0.280888840263504,2.21559419351475,1.81850203222008,1.41335829804136,4.64783285263046,0,0,0,1.73192832808971,2.02687892380079,0.505524445014783,0.11418387971906,0,0.593768556259299,2.60227990149204,1.52232739156071,1.38369298353635,3.01445281105245,0.940709657085638,0.502666365318702,3.70792451601561,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,3.80615036115011,1.04723353406728,0,0,0,0,9.13722900369418,2.28750301409313,22.6177833803156,3.12883776346098,2.04572365864264,7.89594569326328,3.40706652442291,1.83310854930569,0.373220911830279,0.252722758433675,0.420883711772948,2.34216797332867,5.51765050640335,5.76198815377118,4.06903008156431,3.33378845841506,2.562274405697,4.49768277886698,1.29351685369508,3.23351989399263,2.64748512234947,2.81521798662318,4.82230611340665,1.39023624612799,1.39300866608867,2.05782136407943,2.18937693500343,0,0,0,0,0.703578179943289,0.540186184383045,0.473489471170421,0.393528463494808,0,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,2.3131894342054,22.1244916615462,0.330418782983798,0,1.49301775374664,0.928946687441754,1.9330119198314,0.80673409849337,0.667134131534611,1.90225626112559,0.949058123089023,0.988193728344065,0.502670417600539,0.994782360205754,1.16978452271472,0,0.648414149624083,0.199141273254367,2.65535061334314,1.5994791765362,1.1270773567308,1.01825663922657,2.32742984601151,1.8936671370386,1.01178459398812,0.590440591918409,0.627994911365499,0.246794327843601,0,0.166845105716094,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0,0,0,0.739012760666419,4.35830247072115,2.77040459951444,2.71592137240301,2.81628297946203,1.84256883185997,1.6663054862021,0.975668239288994,0.630540576424764,0.8858587585951,1.2756381492599,0.491589944147214,0.690739927463582,0.723245292907558,0,1.63171705145613,0.491764273019036,1.93155722413313,5.45872005958493,3.16471553798949,0,0,0.94652465824877,1.56175497718655,2.36965737506079,0.716906393857656,1.55959071857676,2.83076530788832,0.404810701674894,2.92255857911312,1.97643888973262,3.21321316421807,1.27746076687442,4.98583690268315,3.25773918707152,1.64970122972535,0,1.69946445308487,1.81394134178851,0.943025398779491,0.885905678642318,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,1.36175842301515,3.24109969256358,5.43306471887569,2.14337035031592,1.95074257006501,6.24290861607247,4.77192159746151,7.00269382963578,0,0.63549621259146,4.19003956304428,1.15420377059036,1.45317984026315,1.02531972377865,0.835606408021955,1.31312719796049,0.291480836629851,2.41052892613663,0,1.857481811669,0.925972636848558,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,2.05618395827738,2.23651413839534,1.51207477150522,1.46361807210128,1.31017538247707,0.674321731924103,0.909188012978695,0,0.388844919875379,0.621339313086926,0,1.34564891439581,1.48912641411388,1.16670713006429,2.71235629303235,2.36538575687089,1.87771581833206,0.781226309063701,0.524296722128554,0.483168241652012,0,0.632022241256357,2.22997736819181,1.64337531463724,0.51968329191118,0.716106782669926,0.39736270956253,0.360586348559907,0.886137163047463,0.100966449948148,0.381034033274999,0,0.584747284438515,0.192423683280659,0,0.453460767230423,4.43971906748129,0.986852422704233,1.84673078000486,0.19318959403219,0.563047426353546,1.64836461840539,1.71494703263253,5.01572104035363,11.8597886949584,11.5081309126794,17.7597609166213,9.96748457593388,5.48066015816514,8.3093328712867,5.40018000185445,3.60256962579376,4.07828168085784,2.07104124700728,2.49089634202024,3.99024873401031,6.82934423016537,5.34834777550247,6.28839487883947,6.61836630420051,6.88964856185007,7.0051919461224,5.45562656306086,5.30664144703975,7.09742039692671,2.64076877940507,5.3375659257833,5.50616310681876,6.31790158511746,5.23923060411381,6.605406578856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|short_description=p2@Rac3
|short_description=p2@Rac3
}}
}}

Latest revision as of 03:19, 27 September 2015

Short description:p2@Rac3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rac3_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -8bp_to_ENSMUST00000142229_5end
EntrezGene:Rac3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rac3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.60
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C354.83
Mouse Granule cells, donor2.CNhs12357.11731-123E368.24
Mouse Granule cells, donor3.CNhs12108.11636-122C776.69
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F176.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D561.40
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D458.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F465.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D848.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D671.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F659.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E163.94
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F122.62
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C63.33
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G84.50
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G122.12
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H26.83
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I520.73
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.90e-1723
neuroblast (sensu Vertebrata)7.90e-1723
ectodermal cell5.78e-1644
neurectodermal cell5.78e-1644
neural cell1.10e-1543
neuron2.73e-1333
neuronal stem cell2.73e-1333
neuroblast2.73e-1333
electrically signaling cell2.73e-1333
electrically responsive cell1.92e-1039
electrically active cell1.92e-1039

Uber anatomy
Ontology termp-valuen
central nervous system1.88e-2773
nervous system2.37e-2675
ectoderm-derived structure9.37e-2595
ectoderm9.37e-2595
presumptive ectoderm9.37e-2595
regional part of nervous system1.45e-2454
neural tube1.47e-2252
neural rod1.47e-2252
future spinal cord1.47e-2252
neural keel1.47e-2252
neurectoderm2.26e-2264
neural plate2.26e-2264
presumptive neural plate2.26e-2264
ecto-epithelium8.43e-2173
brain9.51e-1947
future brain9.51e-1947
regional part of brain1.37e-1846
gray matter1.81e-1834
pre-chordal neural plate7.12e-1849
anterior neural tube2.51e-1740
regional part of forebrain1.03e-1639
forebrain1.03e-1639
future forebrain1.03e-1639
brain grey matter1.33e-1429
regional part of telencephalon1.33e-1429
telencephalon1.33e-1429
structure with developmental contribution from neural crest1.51e-1192
cerebral cortex8.18e-1021
cerebral hemisphere8.18e-1021
pallium8.18e-1021
regional part of cerebral cortex2.68e-0817
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