FFCP PHASE1:Mm9::chr13:55424105..55424125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=446 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:55424105..55424125,+ | |||
|description=CAGE_peak_at_chr13:55424105..55424125,+ | |description=CAGE_peak_at_chr13:55424105..55424125,+ | ||
|id=chr13:55424105..55424125,+ | |id=chr13:55424105..55424125,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.78e-09!9;CL:0002251!1.78e-09!9;CL:0000239!1.11e-07!6;CL:0000677!1.11e-07!6;CL:0000212!1.11e-07!6;CL:0000584!1.11e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.58e-10,3;CL:0000239,3.12e-08,6;CL:0000677,3.12e-08,6;CL:0000584,3.12e-08,6;CL:0000075,4.68e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.02e-17!43;UBERON:0000344!2.52e-16!15;UBERON:0001242!2.31e-14!13;UBERON:0000060!2.31e-14!13;UBERON:0001262!2.31e-14!13;UBERON:0004786!2.31e-14!13;UBERON:0005409!8.86e-14!59;UBERON:0004119!2.13e-13!130;UBERON:0000925!2.13e-13!130;UBERON:0006595!2.13e-13!130;UBERON:0004923!1.06e-12!24;UBERON:0001007!3.66e-12!128;UBERON:0001555!3.66e-12!128;UBERON:0007026!3.66e-12!128;UBERON:0004921!6.03e-11!126;UBERON:0004185!6.03e-11!126;UBERON:0003350!1.78e-09!9;UBERON:0004808!1.78e-09!9;UBERON:0001277!1.78e-09!9;UBERON:0002107!7.80e-09!22;UBERON:0007499!7.80e-09!22;UBERON:0006925!7.80e-09!22;UBERON:0009497!7.80e-09!22;UBERON:0000015!7.80e-09!22;UBERON:0002423!7.80e-09!22;UBERON:0006235!7.80e-09!22;UBERON:0008835!7.80e-09!22;UBERON:0003894!7.80e-09!22;UBERON:0004161!7.80e-09!22;UBERON:0008836!7.80e-09!22;UBERON:0009854!2.85e-08!23;UBERON:0009856!2.85e-08!23;UBERON:0000485!2.31e-07!11;UBERON:0002365!2.73e-07!25;UBERON:0002330!2.73e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.64e-35,31;UBERON:0005409,1.33e-21,47;UBERON:0000344,7.50e-15,15;UBERON:0001242,6.05e-14,13;UBERON:0001262,6.05e-14,13;UBERON:0004786,6.05e-14,13;UBERON:0001007,2.15e-13,116;UBERON:0001555,2.15e-13,116;UBERON:0007026,2.15e-13,116;UBERON:0004119,4.47e-13,118;UBERON:0000925,4.47e-13,118;UBERON:0006595,4.47e-13,118;UBERON:0002108,9.05e-13,4;UBERON:0004921,1.72e-12,114;UBERON:0000331,5.77e-10,3;UBERON:0002116,5.77e-10,3;UBERON:0001204,5.77e-10,3;UBERON:0001168,5.77e-10,3;UBERON:0004923,1.10e-08,24 | |||
|phase1_expression=0,4.88565570695105,2.27499619694768,2.11724947914781,3.50627010962443,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,1.43993180514066,0.68822784320151,2.29692785646008,5.59990595006797,3.44753972297422,8.7410772949932,2.01624103807945,4.21287970245079,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,1.25602267690966,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,15.6025834331491,0,0,0,0.605050573870028,1.11189021922435,1.52180500890047,4.74529061544512,3.62337700392824,1.50801125280162,1.39269530428806,0.779856348476481,4.49409704327111,3.02593269824572,3.38540164532424,0,0,0,0,0.193952487167626,0.140271639780637,0.252946148497029,0.885660887877613,0.470996183524124,0.616985819609003,0.889357881261447,0,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0,0.648540907100142,2.47105271869273,1.43768206527355,1.48856379067401,1.87222603868736,1.01031551178845,1.61457672169721,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.63549621259146,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.655087691238533,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,4.88565570695105,2.27499619694768,2.11724947914781,3.50627010962443,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,1.43993180514066,0.68822784320151,2.29692785646008,5.59990595006797,3.44753972297422,8.7410772949932,2.01624103807945,4.21287970245079,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,1.25602267690966,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,15.6025834331491,0,0,0,0.605050573870028,1.11189021922435,1.52180500890047,4.74529061544512,3.62337700392824,1.50801125280162,1.39269530428806,0.779856348476481,4.49409704327111,3.02593269824572,3.38540164532424,0,0,0,0,0.193952487167626,0.140271639780637,0.252946148497029,0.885660887877613,0.470996183524124,0.616985819609003,0.889357881261447,0,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0,0.648540907100142,2.47105271869273,1.43768206527355,1.48856379067401,1.87222603868736,1.01031551178845,1.61457672169721,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.63549621259146,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.655087691238533,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr13:55424105..55424125,+ | |short_description=p@chr13:55424105..55424125,+ | ||
}} | }} |
Latest revision as of 03:49, 6 August 2015
Short description: | p@chr13:55424105..55424125, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:55424105..55424125, + |
Coexpression cluster: | MCL_coexpression_mm9:446 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.58e-10 | 3 |
brush border epithelial cell | 3.12e-08 | 6 |
gut absorptive cell | 3.12e-08 | 6 |
enterocyte | 3.12e-08 | 6 |
columnar/cuboidal epithelial cell | 4.68e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.64e-35 | 31 |
gastrointestinal system | 1.33e-21 | 47 |
mucosa | 7.50e-15 | 15 |
intestinal mucosa | 6.05e-14 | 13 |
wall of intestine | 6.05e-14 | 13 |
gastrointestinal system mucosa | 6.05e-14 | 13 |
digestive system | 2.15e-13 | 116 |
digestive tract | 2.15e-13 | 116 |
primitive gut | 2.15e-13 | 116 |
endoderm-derived structure | 4.47e-13 | 118 |
endoderm | 4.47e-13 | 118 |
presumptive endoderm | 4.47e-13 | 118 |
small intestine | 9.05e-13 | 4 |
subdivision of digestive tract | 1.72e-12 | 114 |
ileal mucosa | 5.77e-10 | 3 |
ileum | 5.77e-10 | 3 |
mucosa of small intestine | 5.77e-10 | 3 |
wall of small intestine | 5.77e-10 | 3 |
organ component layer | 1.10e-08 | 24 |