FFCP PHASE1:Mm9::chr10:34138271..34138373,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319638 | |EntrezGene=319638 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1507 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C5P5,E9QN01,Q05AG7 | |UniProt=Q8C5P5,E9QN01,Q05AG7 | ||
|association_with_transcript=0bp_to_ENSMUST00000047885,ENSMUST00000099973,ENSMUST00000105512,ENSMUST00000130290,NM_176968,uc007euv.1,uc007euw.1,uc011xcq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000047885,ENSMUST00000099973,ENSMUST00000105512,ENSMUST00000130290,NM_176968,uc007euv.1,uc007euw.1,uc011xcq.1_5end | ||
|cluster_id=chr10:34138271..34138373,- | |||
|description=CAGE_peak_1_at_Nt5dc1_5end | |description=CAGE_peak_1_at_Nt5dc1_5end | ||
|id=chr10:34138271..34138373,- | |id=chr10:34138271..34138373,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.64e-18!193;UBERON:0004120!9.64e-18!193;UBERON:0006603!9.64e-18!193;UBERON:0003104!1.44e-15!131;UBERON:0009142!1.44e-15!131;UBERON:0000077!1.94e-11!97;UBERON:0001041!1.46e-10!92;UBERON:0004119!1.88e-10!130;UBERON:0000925!1.88e-10!130;UBERON:0006595!1.88e-10!130;UBERON:0001007!2.62e-10!128;UBERON:0001555!2.62e-10!128;UBERON:0007026!2.62e-10!128;UBERON:0002405!3.92e-10!70;UBERON:0004921!4.14e-10!126;UBERON:0004185!4.14e-10!126;UBERON:0005057!1.01e-09!51;UBERON:0001004!4.31e-08!42;UBERON:0005911!5.69e-08!69;UBERON:0000065!1.07e-07!41;UBERON:0004177!1.27e-07!29;UBERON:0002193!1.35e-07!48;UBERON:0009569!1.63e-07!66;UBERON:0000490!4.46e-07!66;UBERON:0002390!5.26e-07!45;UBERON:0003061!5.26e-07!45;UBERON:0001048!5.68e-07!147;UBERON:0003408!8.85e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,8.99e-13,80;UBERON:0004119,5.26e-12,118;UBERON:0000925,5.26e-12,118;UBERON:0006595,5.26e-12,118;UBERON:0001007,7.21e-12,116;UBERON:0001555,7.21e-12,116;UBERON:0007026,7.21e-12,116;UBERON:0004921,1.13e-11,114;UBERON:0000926,2.29e-08,120;UBERON:0004120,2.29e-08,120;UBERON:0006603,2.29e-08,120;UBERON:0001004,4.31e-08,42;UBERON:0000077,4.49e-08,35;UBERON:0005911,5.69e-08,69;UBERON:0002100,8.55e-08,90;UBERON:0000065,1.07e-07,41;UBERON:0004177,1.27e-07,29;UBERON:0005057,1.27e-07,29;UBERON:0001048,1.33e-07,134;UBERON:0002193,1.35e-07,48;UBERON:0002405,1.35e-07,48;UBERON:0009569,1.63e-07,66;UBERON:0000490,4.46e-07,66;UBERON:0002390,5.26e-07,45;UBERON:0003061,5.26e-07,45;UBERON:0003408,8.85e-07,24 | |||
|phase1_expression=15.0539916278506,12.563114675017,16.3799726180233,9.98131897312539,9.5170188689806,13.9339795686869,14.7175963575181,73.9876643320232,22.80777298857,30.6624529481811,39.2089147236406,28.7179772383211,67.6242883228263,65.565301814248,24.9832321361747,29.3589137715248,27.9824751251259,49.2120977958851,56.3540322119586,41.1657962244089,29.5100216824212,36.9362338467293,32.9111734315059,22.3989391910769,24.0879745120529,18.9496548157957,14.2151458732495,18.0995835456147,21.2826229791139,18.146169342715,21.2861290229093,19.6859508772486,11.0711661765223,0,20.7973166220918,19.4494535069436,18.3752420636132,118.444451498545,72.6641870407134,101.563606330917,97.6464270131484,99.7246408039331,114.580443315352,40.6646722061115,37.1039568263423,19.8230492334616,9.38869613217647,5.45062890951116,6.81027166476863,8.1660557611199,7.41928034614421,5.75010257459886,37.2477385448175,73.2615763431458,54.4471954610792,13.8920095459411,10.601737277734,17.532851137433,2.02316460859598,1.05798195854407,3.1691570175309,6.09920157724438,6.22506357277798,7.19919773825119,7.9109309005358,5.6838409195688,5.69240209984969,7.68436610643109,3.31806759387129,2.43010688997043,2.3135745748652,3.99911378165325,4.41737081903227,1.95985278743926,1.72521847832825,1.83843757322004,3.30347642998166,4.21368215681119,5.06901559745603,0.923204014111357,1.9212405156506,1.56274011167028,2.79182999001381,5.06486349028512,6.72312290217964,2.94628585473668,4.6982654663704,2.23679334990361,13.8578933799727,14.5853111006096,17.6817338108023,24.0918685554788,24.478968013479,31.3027851149934,39.6363614643078,42.1145273871495,30.1955503283267,28.6322941931137,22.8611684050525,16.606960001986,15.7744630149882,28.2318250311499,5.09610479413291,7.11066703153331,20.7831399370766,17.4818307177818,20.2209778005913,27.5183150122935,87.521004672744,28.5008907004464,11.1030609130327,21.0081180035377,15.912469310668,19.4432206312883,28.691644541112,20.8606541607261,22.7419370315624,40.0540218668155,38.9228642857945,22.8091258425847,24.5134085491037,21.3345111379498,33.550517019262,10.2473278954042,7.95897485891129,25.034791410442,28.6358147569149,21.5964983157627,31.7675567682662,8.08869452786043,10.5225138648284,2.76439574648302,9.38651329038293,8.69432554923124,6.2336413367868,7.62533936418461,18.8402823123085,28.8624171815416,28.5576717030052,42.9301386008407,11.5807194236806,13.104419952708,14.7650946440386,12.0563854268572,19.7986212530364,22.2917873295639,14.4300655821982,30.5269977472039,10.1316956678436,14.3720620927543,16.3634545472472,16.4396799320681,23.6340161841758,18.4573648256748,21.812906459242,13.5343301436575,30.1951670544691,29.852357225307,31.2579849335152,10.5634143993106,12.6644072389792,9.7233513188948,12.7842157216014,13.5767319905709,13.2669717083145,13.9520366850245,15.2915838797783,19.7333428600516,17.4433440908289,23.8042822914688,22.9424731014772,18.4211984155919,28.1024147572545,25.633425983231,12.6173969138476,5.04232600658494,23.4597335918497,20.3626936330929,9.38468302355029,9.28946687441754,14.6908905907186,20.5717195115809,19.7916459021935,18.2616601068057,20.404749646414,24.0460473897056,23.3741744184251,29.2466013900492,24.9554031512474,15.2799299471218,27.6656703839609,27.4814957091027,11.0007382552787,15.8805432527523,27.0498565615393,19.7541788009955,19.2012962295949,28.0543279561274,35.0330415668385,45.0210951337787,43.3316488842194,51.4566173553908,42.9856309276366,18.8534969459186,16.7075145846223,17.9889689907883,15.8230894683032,18.3294641411837,16.2960545140109,15.8232875597946,28.2115294588562,27.4561413188081,31.629005436018,29.7712758134803,23.7148631567066,35.6136217905428,37.1352645990358,44.3848039654298,41.5694677874861,10.8010104709176,14.5038829033403,16.9745085775188,19.9486711045227,24.1209010716215,27.1369750610056,26.147908812945,38.3053400178044,35.6558150334528,28.8613131270052,37.8524256993355,39.5448608472901,34.1371778252367,25.6345182696763,22.3001330365671,22.1293922858566,31.4567890787395,11.0779907091576,8.32202974804643,16.8852993737976,31.3063949733423,10.4117712407365,10.1514073517126,14.8642144435631,12.4263774935327,11.8083297263669,12.7384438854975,15.382806663646,8.76767573733936,8.30104333687699,6.74774764485795,28.3880170416537,9.43747699436453,18.4062264069541,28.5398312742486,13.2745138339963,16.9946445308487,12.6975893925195,12.6365403436452,7.38254732201932,13.2197113615889,22.4832615056352,18.5402202033528,21.746340081468,19.9103157499564,26.3546521437497,14.4389760547462,30.6395645178409,12.784337676223,8.79639049722731,11.1455258216428,14.3645589250242,13.7343989553594,12.5057255657612,10.9607381681256,20.8857820176702,23.3015277950202,20.5091410191115,29.5146392765249,31.0011699256139,31.3024080377129,29.2462242807684,33.8130253474826,24.7758711135373,7.97328798645192,30.5858876628156,19.4003655885429,26.6680119412385,39.3690075139804,35.5404992074665,31.3426097292936,50.1436368481873,51.6420859074298,49.4755906219837,40.0961659566348,9.96458379780576,15.8589184358942,19.3329560071024,18.3997700492732,19.2159056096636,31.6931214004329,33.9705703031131,32.9812486899877,36.8106524148692,39.7657160375632,99.2099572084175,14.8021380583539,12.9057622556536,13.4171319957393,11.7535439364735,18.4162176784948,28.165737274981,22.9159717325352,26.6342734841306,54.8395954275034,66.5349314455669,52.4578460242776,14.798940716182,24.0343639765696,25.33456048067,30.7925916548068,32.3850608293462,39.7846937911097,43.5684105165003,46.4445669761479,47.5530473527199,50.5139187535571,48.5340246083967,42.1407866384643,64.7498038085892,26.7541852665949,15.9829886429327,17.3147743256288,13.7665385418544,39.4106771825669,25.9001816122631,30.403169628366,39.01504499239,28.5896099300157,1.6942555278512,5.06357760157895,4.58316410751517,4.98374228796694,6.16574267793578,3.7769694869485,9.45031500324528,4.5032120322422,4.98456649882625,8.28416498802912,4.8780053364563,10.3746467084268,11.7806187970353,12.6415492875513,8.59413966774727,9.37601893095072,15.3350242183115,14.4224540067226,14.4413644316317,15.6672271293554,17.2365923925363,14.9014809695,12.0797544636148,13.7654077670469,12.8081095771018,14.2888107384922,12.3996228760995,12.1532808892134,13.1867488257058,13.5423006523646,22.6293706574374,12.7782580434723,12.3986818772607,16.2787986628208,13.9281883014689,14.8075563810434,14.451309856949,14.4688341290814,13.4446072707403,21.8845485946518,14.9480122836459,13.1010961559499,15.9600106836179,13.3245683419931,18.1332214322273,10.9916654292696,22.2235028023138,25.9993975398441,24.484906504812,20.2944105589954,31.7658934799977 | |phase1_expression=15.0539916278506,12.563114675017,16.3799726180233,9.98131897312539,9.5170188689806,13.9339795686869,14.7175963575181,73.9876643320232,22.80777298857,30.6624529481811,39.2089147236406,28.7179772383211,67.6242883228263,65.565301814248,24.9832321361747,29.3589137715248,27.9824751251259,49.2120977958851,56.3540322119586,41.1657962244089,29.5100216824212,36.9362338467293,32.9111734315059,22.3989391910769,24.0879745120529,18.9496548157957,14.2151458732495,18.0995835456147,21.2826229791139,18.146169342715,21.2861290229093,19.6859508772486,11.0711661765223,0,20.7973166220918,19.4494535069436,18.3752420636132,118.444451498545,72.6641870407134,101.563606330917,97.6464270131484,99.7246408039331,114.580443315352,40.6646722061115,37.1039568263423,19.8230492334616,9.38869613217647,5.45062890951116,6.81027166476863,8.1660557611199,7.41928034614421,5.75010257459886,37.2477385448175,73.2615763431458,54.4471954610792,13.8920095459411,10.601737277734,17.532851137433,2.02316460859598,1.05798195854407,3.1691570175309,6.09920157724438,6.22506357277798,7.19919773825119,7.9109309005358,5.6838409195688,5.69240209984969,7.68436610643109,3.31806759387129,2.43010688997043,2.3135745748652,3.99911378165325,4.41737081903227,1.95985278743926,1.72521847832825,1.83843757322004,3.30347642998166,4.21368215681119,5.06901559745603,0.923204014111357,1.9212405156506,1.56274011167028,2.79182999001381,5.06486349028512,6.72312290217964,2.94628585473668,4.6982654663704,2.23679334990361,13.8578933799727,14.5853111006096,17.6817338108023,24.0918685554788,24.478968013479,31.3027851149934,39.6363614643078,42.1145273871495,30.1955503283267,28.6322941931137,22.8611684050525,16.606960001986,15.7744630149882,28.2318250311499,5.09610479413291,7.11066703153331,20.7831399370766,17.4818307177818,20.2209778005913,27.5183150122935,87.521004672744,28.5008907004464,11.1030609130327,21.0081180035377,15.912469310668,19.4432206312883,28.691644541112,20.8606541607261,22.7419370315624,40.0540218668155,38.9228642857945,22.8091258425847,24.5134085491037,21.3345111379498,33.550517019262,10.2473278954042,7.95897485891129,25.034791410442,28.6358147569149,21.5964983157627,31.7675567682662,8.08869452786043,10.5225138648284,2.76439574648302,9.38651329038293,8.69432554923124,6.2336413367868,7.62533936418461,18.8402823123085,28.8624171815416,28.5576717030052,42.9301386008407,11.5807194236806,13.104419952708,14.7650946440386,12.0563854268572,19.7986212530364,22.2917873295639,14.4300655821982,30.5269977472039,10.1316956678436,14.3720620927543,16.3634545472472,16.4396799320681,23.6340161841758,18.4573648256748,21.812906459242,13.5343301436575,30.1951670544691,29.852357225307,31.2579849335152,10.5634143993106,12.6644072389792,9.7233513188948,12.7842157216014,13.5767319905709,13.2669717083145,13.9520366850245,15.2915838797783,19.7333428600516,17.4433440908289,23.8042822914688,22.9424731014772,18.4211984155919,28.1024147572545,25.633425983231,12.6173969138476,5.04232600658494,23.4597335918497,20.3626936330929,9.38468302355029,9.28946687441754,14.6908905907186,20.5717195115809,19.7916459021935,18.2616601068057,20.404749646414,24.0460473897056,23.3741744184251,29.2466013900492,24.9554031512474,15.2799299471218,27.6656703839609,27.4814957091027,11.0007382552787,15.8805432527523,27.0498565615393,19.7541788009955,19.2012962295949,28.0543279561274,35.0330415668385,45.0210951337787,43.3316488842194,51.4566173553908,42.9856309276366,18.8534969459186,16.7075145846223,17.9889689907883,15.8230894683032,18.3294641411837,16.2960545140109,15.8232875597946,28.2115294588562,27.4561413188081,31.629005436018,29.7712758134803,23.7148631567066,35.6136217905428,37.1352645990358,44.3848039654298,41.5694677874861,10.8010104709176,14.5038829033403,16.9745085775188,19.9486711045227,24.1209010716215,27.1369750610056,26.147908812945,38.3053400178044,35.6558150334528,28.8613131270052,37.8524256993355,39.5448608472901,34.1371778252367,25.6345182696763,22.3001330365671,22.1293922858566,31.4567890787395,11.0779907091576,8.32202974804643,16.8852993737976,31.3063949733423,10.4117712407365,10.1514073517126,14.8642144435631,12.4263774935327,11.8083297263669,12.7384438854975,15.382806663646,8.76767573733936,8.30104333687699,6.74774764485795,28.3880170416537,9.43747699436453,18.4062264069541,28.5398312742486,13.2745138339963,16.9946445308487,12.6975893925195,12.6365403436452,7.38254732201932,13.2197113615889,22.4832615056352,18.5402202033528,21.746340081468,19.9103157499564,26.3546521437497,14.4389760547462,30.6395645178409,12.784337676223,8.79639049722731,11.1455258216428,14.3645589250242,13.7343989553594,12.5057255657612,10.9607381681256,20.8857820176702,23.3015277950202,20.5091410191115,29.5146392765249,31.0011699256139,31.3024080377129,29.2462242807684,33.8130253474826,24.7758711135373,7.97328798645192,30.5858876628156,19.4003655885429,26.6680119412385,39.3690075139804,35.5404992074665,31.3426097292936,50.1436368481873,51.6420859074298,49.4755906219837,40.0961659566348,9.96458379780576,15.8589184358942,19.3329560071024,18.3997700492732,19.2159056096636,31.6931214004329,33.9705703031131,32.9812486899877,36.8106524148692,39.7657160375632,99.2099572084175,14.8021380583539,12.9057622556536,13.4171319957393,11.7535439364735,18.4162176784948,28.165737274981,22.9159717325352,26.6342734841306,54.8395954275034,66.5349314455669,52.4578460242776,14.798940716182,24.0343639765696,25.33456048067,30.7925916548068,32.3850608293462,39.7846937911097,43.5684105165003,46.4445669761479,47.5530473527199,50.5139187535571,48.5340246083967,42.1407866384643,64.7498038085892,26.7541852665949,15.9829886429327,17.3147743256288,13.7665385418544,39.4106771825669,25.9001816122631,30.403169628366,39.01504499239,28.5896099300157,1.6942555278512,5.06357760157895,4.58316410751517,4.98374228796694,6.16574267793578,3.7769694869485,9.45031500324528,4.5032120322422,4.98456649882625,8.28416498802912,4.8780053364563,10.3746467084268,11.7806187970353,12.6415492875513,8.59413966774727,9.37601893095072,15.3350242183115,14.4224540067226,14.4413644316317,15.6672271293554,17.2365923925363,14.9014809695,12.0797544636148,13.7654077670469,12.8081095771018,14.2888107384922,12.3996228760995,12.1532808892134,13.1867488257058,13.5423006523646,22.6293706574374,12.7782580434723,12.3986818772607,16.2787986628208,13.9281883014689,14.8075563810434,14.451309856949,14.4688341290814,13.4446072707403,21.8845485946518,14.9480122836459,13.1010961559499,15.9600106836179,13.3245683419931,18.1332214322273,10.9916654292696,22.2235028023138,25.9993975398441,24.484906504812,20.2944105589954,31.7658934799977 | ||
|short_description=p1@Nt5dc1 | |short_description=p1@Nt5dc1 | ||
}} | }} |
Latest revision as of 23:25, 25 September 2015
Short description: | p1@Nt5dc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nt5dc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1507 |
Association with transcript: | 0bp_to_ENSMUST00000047885, ENSMUST00000099973, ENSMUST00000105512, ENSMUST00000130290, NM_176968, uc007euv.1, uc007euw.1, uc011xcq.1_5end |
EntrezGene: | Nt5dc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
foregut | 8.99e-13 | 80 |
endoderm-derived structure | 5.26e-12 | 118 |
endoderm | 5.26e-12 | 118 |
presumptive endoderm | 5.26e-12 | 118 |
digestive system | 7.21e-12 | 116 |
digestive tract | 7.21e-12 | 116 |
primitive gut | 7.21e-12 | 116 |
subdivision of digestive tract | 1.13e-11 | 114 |
mesoderm | 2.29e-08 | 120 |
mesoderm-derived structure | 2.29e-08 | 120 |
presumptive mesoderm | 2.29e-08 | 120 |
respiratory system | 4.31e-08 | 42 |
mixed endoderm/mesoderm-derived structure | 4.49e-08 | 35 |
endo-epithelium | 5.69e-08 | 69 |
trunk | 8.55e-08 | 90 |
respiratory tract | 1.07e-07 | 41 |
hemopoietic organ | 1.27e-07 | 29 |
immune organ | 1.27e-07 | 29 |
primordium | 1.33e-07 | 134 |
hemolymphoid system | 1.35e-07 | 48 |
immune system | 1.35e-07 | 48 |
subdivision of trunk | 1.63e-07 | 66 |
unilaminar epithelium | 4.46e-07 | 66 |
hematopoietic system | 5.26e-07 | 45 |
blood island | 5.26e-07 | 45 |
gland of gut | 8.85e-07 | 24 |