FFCP PHASE1:Hg19::chr10:17271866..17271897,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=85bp_to_uc001iot.1_5end | |association_with_transcript=85bp_to_uc001iot.1_5end | ||
|cluster_id=chr10:17271866..17271897,- | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_5_at_uc001iot.1_5end | |description=CAGE_peak_5_at_uc001iot.1_5end | ||
|id=chr10:17271866..17271897,- | |id=chr10:17271866..17271897,- | ||
|ontology_enrichment_celltype=CL:0000055!1.27e-29!180;CL:0002371!1.50e-29!591;CL:0000144!2.79e-26!625;CL:0000048!3.27e-22!430;CL:0000723!1.20e-20!436;CL:0000057!6.55e-19!75;CL:0000034!1.97e-18!444;CL:0000548!1.24e-17!679;CL:0000004!1.24e-17!679;CL:0000255!1.24e-17!679;CL:0000222!7.89e-17!119;CL:0000012!1.13e-16!682;CL:0002320!1.38e-12!365;CL:0000183!1.66e-12!59;CL:0000680!7.82e-12!57;CL:0000056!7.82e-12!57;CL:0000355!7.82e-12!57;CL:0000187!9.67e-12!54;CL:0000003!2.60e-11!722;CL:0000134!5.95e-11!358;CL:0000219!8.54e-11!390;CL:0000192!1.74e-10!42;CL:0000514!1.74e-10!42;CL:0000393!9.59e-10!60;CL:0000211!9.59e-10!60;CL:0000359!9.37e-09!32;CL:0002620!1.14e-08!23;CL:0002057!8.80e-08!42;CL:0002139!2.74e-07!24;CL:0000071!5.80e-07!18;CL:0002546!5.80e-07!18;CL:0002078!7.53e-07!44 | |ontology_enrichment_celltype=CL:0000055!1.27e-29!180;CL:0002371!1.50e-29!591;CL:0000144!2.79e-26!625;CL:0000048!3.27e-22!430;CL:0000723!1.20e-20!436;CL:0000057!6.55e-19!75;CL:0000034!1.97e-18!444;CL:0000548!1.24e-17!679;CL:0000004!1.24e-17!679;CL:0000255!1.24e-17!679;CL:0000222!7.89e-17!119;CL:0000012!1.13e-16!682;CL:0002320!1.38e-12!365;CL:0000183!1.66e-12!59;CL:0000680!7.82e-12!57;CL:0000056!7.82e-12!57;CL:0000355!7.82e-12!57;CL:0000187!9.67e-12!54;CL:0000003!2.60e-11!722;CL:0000134!5.95e-11!358;CL:0000219!8.54e-11!390;CL:0000192!1.74e-10!42;CL:0000514!1.74e-10!42;CL:0000393!9.59e-10!60;CL:0000211!9.59e-10!60;CL:0000359!9.37e-09!32;CL:0002620!1.14e-08!23;CL:0002057!8.80e-08!42;CL:0002139!2.74e-07!24;CL:0000071!5.80e-07!18;CL:0002546!5.80e-07!18;CL:0002078!7.53e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.55e-10;23!CL:0000359;7.21e-09;32!CL:0000192;1.30e-08;43!CL:0000057;2.81e-08;73!CL:0000860;3.01e-08;33!CL:0002057;3.01e-08;33!CL:0000071;1.36e-07;18!CL:0000187;1.47e-07;55!CL:0002139;1.54e-07;24!CL:0000473;4.87e-07;39!CL:0000234;4.87e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.15e-24,427;CL:0000723,1.10e-22,433;CL:0000034,7.10e-21,441;CL:0000057,3.94e-20,76;CL:0000222,5.32e-16,121;CL:0002320,1.97e-13,361;CL:0000187,3.88e-13,55;CL:0000680,4.06e-13,58;CL:0000056,4.06e-13,58;CL:0000355,4.06e-13,58;CL:0000134,9.46e-12,354;CL:0000192,1.03e-11,43;CL:0000514,1.03e-11,43;CL:0000219,5.34e-11,386;CL:0000393,6.77e-11,61;CL:0000211,6.77e-11,61;CL:0002620,1.29e-09,23;CL:0000359,2.57e-09,32;CL:0002139,8.71e-08,24;CL:0000071,8.71e-08,18;CL:0002546,8.71e-08,18;CL:0002321,7.32e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.30e-08;43!CL:0002546;1.36e-07;18!CL:0000355;4.55e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.20e-17!167;UBERON:0000914!3.04e-16!83;UBERON:0002329!3.04e-16!83;UBERON:0003077!3.04e-16!83;UBERON:0003059!3.04e-16!83;UBERON:0007282!3.04e-16!83;UBERON:0009618!3.04e-16!83;UBERON:0007285!3.04e-16!83;UBERON:0002049!3.66e-16!79;UBERON:0007798!3.66e-16!79;UBERON:0003081!1.45e-15!216;UBERON:0004290!3.92e-15!70;UBERON:0000055!1.39e-14!69;UBERON:0004535!3.80e-14!110;UBERON:0001981!4.36e-14!60;UBERON:0007500!4.36e-14!60;UBERON:0004537!4.36e-14!60;UBERON:0006965!4.36e-14!60;UBERON:0001637!1.23e-13!42;UBERON:0003509!1.23e-13!42;UBERON:0004572!1.23e-13!42;UBERON:0004872!2.74e-13!84;UBERON:0001009!4.58e-13!113;UBERON:0002384!1.74e-12!375;UBERON:0000926!2.29e-12!448;UBERON:0004120!2.29e-12!448;UBERON:0006603!2.29e-12!448;UBERON:0000486!5.21e-12!82;UBERON:0001134!3.71e-11!61;UBERON:0002036!3.71e-11!61;UBERON:0003082!3.71e-11!61;UBERON:0004573!1.64e-10!33;UBERON:0004571!1.64e-10!33;UBERON:0002385!2.15e-10!63;UBERON:0001015!2.15e-10!63;UBERON:0000383!2.15e-10!63;UBERON:0003914!5.27e-08!118;UBERON:0002199!1.22e-07!45;UBERON:0002416!1.22e-07!45;UBERON:0001013!1.75e-07!14;UBERON:0000947!1.85e-07!21;UBERON:0010191!1.85e-07!21;UBERON:0005256!4.43e-07!143;UBERON:0001986!5.80e-07!18;UBERON:0004638!5.80e-07!18;UBERON:0004852!5.80e-07!18;UBERON:0006914!8.50e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.20e-12;42!UBERON:0003509;9.20e-12;42!UBERON:0004572;9.20e-12;42!UBERON:0004573;1.36e-10;33!UBERON:0004571;1.36e-10;33!UBERON:0007500;4.55e-10;56!UBERON:0001981;4.55e-10;56!UBERON:0004537;4.55e-10;56!UBERON:0002049;1.84e-08;75!UBERON:0007798;1.84e-08;75!UBERON:0000947;1.86e-08;21!UBERON:0010191;1.86e-08;21!UBERON:0001013;2.26e-08;14!UBERON:0000055;6.76e-08;65!UBERON:0004638;1.36e-07;18!UBERON:0001986;1.36e-07;18!UBERON:0004852;1.36e-07;18!UBERON:0003914;1.70e-07;74!UBERON:0002067;6.51e-07;9!UBERON:0006914;7.28e-07;25!UBERON:0002384;8.88e-07;198 | |||
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| ||
|short_description=p5@uc001iot.1 | |short_description=p5@uc001iot.1 | ||
}} | }} |
Latest revision as of 12:15, 23 July 2015
Short description: | p5@uc001iot.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_uc001iot.1_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | 85bp_to_uc001iot.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.15e-24 | 427 |
somatic stem cell | 1.10e-22 | 433 |
stem cell | 7.10e-21 | 441 |
fibroblast | 3.94e-20 | 76 |
mesodermal cell | 5.32e-16 | 121 |
connective tissue cell | 1.97e-13 | 361 |
muscle cell | 3.88e-13 | 55 |
muscle precursor cell | 4.06e-13 | 58 |
myoblast | 4.06e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.06e-13 | 58 |
mesenchymal cell | 9.46e-12 | 354 |
smooth muscle cell | 1.03e-11 | 43 |
smooth muscle myoblast | 1.03e-11 | 43 |
motile cell | 5.34e-11 | 386 |
electrically responsive cell | 6.77e-11 | 61 |
electrically active cell | 6.77e-11 | 61 |
skin fibroblast | 1.29e-09 | 23 |
vascular associated smooth muscle cell | 2.57e-09 | 32 |
endothelial cell of vascular tree | 8.71e-08 | 24 |
blood vessel endothelial cell | 8.71e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.71e-08 | 18 |
embryonic cell | 7.32e-07 | 250 |