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FFCP PHASE1:Mm9::chr12:114252596..114252681,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=217893
|EntrezGene=217893
|HGNC=
|HGNC=
|MCL_coexpression_id=1322
|TSSclassifier=NA
|UniProt=E9Q7E9,Q3V3Q7
|UniProt=E9Q7E9,Q3V3Q7
|association_with_transcript=-37bp_to_ENSMUST00000084891,NM_001081170,uc007pfp.1,uc007pfq.1,uc007pfr.1_5end
|association_with_transcript=-37bp_to_ENSMUST00000084891,NM_001081170,uc007pfp.1,uc007pfq.1,uc007pfr.1_5end
|cluster_id=chr12:114252596..114252681,+
|description=CAGE_peak_1_at_Pacs2_5end
|description=CAGE_peak_1_at_Pacs2_5end
|id=chr12:114252596..114252681,+
|id=chr12:114252596..114252681,+
|ontology_enrichment_celltype=CL:0000117!5.86e-15!23;CL:0000337!5.86e-15!23;CL:0000540!7.19e-15!33;CL:0000047!7.19e-15!33;CL:0000031!7.19e-15!33;CL:0000404!7.19e-15!33;CL:0002319!6.02e-13!43;CL:0000221!7.31e-13!44;CL:0000133!7.31e-13!44;CL:0000393!7.96e-13!39;CL:0000211!7.96e-13!39;CL:0000055!9.00e-11!50
|ontology_enrichment_celltype=CL:0000117!5.86e-15!23;CL:0000337!5.86e-15!23;CL:0000540!7.19e-15!33;CL:0000047!7.19e-15!33;CL:0000031!7.19e-15!33;CL:0000404!7.19e-15!33;CL:0002319!6.02e-13!43;CL:0000221!7.31e-13!44;CL:0000133!7.31e-13!44;CL:0000393!7.96e-13!39;CL:0000211!7.96e-13!39;CL:0000055!9.00e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.86e-15,23;CL:0000337,5.86e-15,23;CL:0000540,7.19e-15,33;CL:0000047,7.19e-15,33;CL:0000031,7.19e-15,33;CL:0000404,7.19e-15,33;CL:0002319,6.02e-13,43;CL:0000221,7.31e-13,44;CL:0000133,7.31e-13,44;CL:0000393,7.96e-13,39;CL:0000211,7.96e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.25e-20!75;UBERON:0001016!1.25e-20!75;UBERON:0001017!2.02e-20!73;UBERON:0005743!2.02e-20!73;UBERON:0004121!3.82e-17!102;UBERON:0000924!3.82e-17!102;UBERON:0006601!3.82e-17!102;UBERON:0001049!3.58e-15!52;UBERON:0005068!3.58e-15!52;UBERON:0006241!3.58e-15!52;UBERON:0007135!3.58e-15!52;UBERON:0002346!3.46e-14!71;UBERON:0003075!3.46e-14!71;UBERON:0007284!3.46e-14!71;UBERON:0000955!6.66e-14!50;UBERON:0006238!6.66e-14!50;UBERON:0002616!1.64e-13!49;UBERON:0000033!1.99e-13!63;UBERON:0002020!7.40e-12!34;UBERON:0003056!1.70e-11!49;UBERON:0000153!1.85e-11!94;UBERON:0007811!5.03e-11!86;UBERON:0003080!2.22e-10!40;UBERON:0002780!6.98e-10!39;UBERON:0001890!6.98e-10!39;UBERON:0006240!6.98e-10!39;UBERON:0002791!3.21e-09!29;UBERON:0003528!3.21e-09!29;UBERON:0001893!3.21e-09!29
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.25e-20,75;UBERON:0001017,2.02e-20,73;UBERON:0004121,1.75e-19,95;UBERON:0000924,1.75e-19,95;UBERON:0006601,1.75e-19,95;UBERON:0002346,5.87e-17,64;UBERON:0003075,5.87e-17,64;UBERON:0007284,5.87e-17,64;UBERON:0000073,2.94e-16,54;UBERON:0001049,3.58e-15,52;UBERON:0005068,3.58e-15,52;UBERON:0006241,3.58e-15,52;UBERON:0007135,3.58e-15,52;UBERON:0010371,8.65e-15,73;UBERON:0000955,3.09e-12,47;UBERON:0006238,3.09e-12,47;UBERON:0002616,7.40e-12,46;UBERON:0002020,7.40e-12,34;UBERON:0003056,1.70e-11,49;UBERON:0003080,2.22e-10,40;UBERON:0002780,6.98e-10,39;UBERON:0001890,6.98e-10,39;UBERON:0006240,6.98e-10,39;UBERON:0003528,3.21e-09,29;UBERON:0002791,3.21e-09,29;UBERON:0001893,3.21e-09,29;UBERON:0010314,4.63e-09,92
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1878371757,15.2489600345137,10.8005340821801,8.99079672862215,9.82631536857799,9.57536859332227,10.0010681427656,6.02038666563268,8.16574331738295,10.5627683224777,10.1464728963154,15.9982704267057,12.4093867842823,18.4728628926845,15.2408591703723,19.5989105569303,18.5424437060291,21.3535191144078,18.874681996628,14.0118790079084,12.0972602628303,12.9564559457553,9.73081033392788,9.55211901632893,10.133824192268,10.2045216530464,11.3248372225321,14.6638448414362,11.8151621739662,10.9043765943999,15.469981750965,16.2330158070313,17.2500448909362,17.8954025451013,15.5446279901487,6.57518112484113,2.88581739386284,1.79427713218951,2.18250001273302,7.72758376128762,12.9500908061316,9.52388446189778,7.28852488868824,14.5455910170255,18.6368108063632,22.5559365888517,17.7597609166213,21.6535009753046,11.6464028361009,12.8416962556249,14.8504950050997,16.2115633160719,10.8754178156209,12.4262474820437,16.2946135707157,22.7444177838588,17.2440941811676,17.7467903459855,20.5420899375423,20.0389424210515,13.3348036680969,17.512979865306,12.194929964489,15.1618327058278,18.7574681918777,14.1469756039557,15.91905626988,19.2075457214608,18.2070436589294,11.9073422820768,20.5115256922394,19.8696497077616,12.3625770240992,13.8366984926333,10.6289468239479,13.8431128804283,16.9289694862598,13.3718703301742,18.2572198005741,18.6152137361688,16.4635175585495,12.6273461490165,17.7903389138079,14.0285567914435,20.7611281717305,20.981454745995,16.7784727699573,18.7473577835019,17.9403148212461,24.2316260599808,17.5448706334056,15.9004579995741,13.7727599089567,12.1325280515734,10.434052602919
|phase1_expression=9.60893082628764,2.79180326111489,2.27499619694768,3.62957053568196,8.01433167914156,5.20425742926858,7.00837921786577,19.1102518693533,7.03943610758334,5.61754863172784,9.07455231595176,10.5299249873844,22.7696970808504,22.2047822144253,10.9926221399169,9.51633756732182,9.79386629379405,8.51747846467242,9.46089591879598,8.48779303596061,9.77997836737302,4.56738375524072,4.70159620450084,3.51983330145495,2.98232065387321,2.29692785646008,3.87685796543167,2.15471232685889,2.66032787238923,3.52842181663903,3.99114919179548,11.4305521222734,14.1464901144451,31.6963362030877,3.46621943701529,4.82080471539628,6.73758875665818,5.85944283031671,4.6880120671428,6.80580867165938,11.7646297606203,11.6117732442936,8.73918635456076,7.42791226055906,7.80602370390262,6.60768307782054,12.5182615095686,9.81113203712009,11.8630538676615,11.665793944457,8.39918529752175,11.5002051491977,4.53013036355888,18.859415692295,28.9040667262519,19.8089765747679,17.4785398362642,17.0171790451556,40.6656086327792,39.1453324661304,37.3960528068646,17.958760199664,12.450127145556,20.6976934974722,11.8663963508037,24.8668040231135,19.7736072942147,22.6688800139717,40.3352591879978,42.7968824511459,37.2275181591946,40.2767888009363,26.9459619960969,40.05449134329,38.8174157623857,36.7687514644008,38.540558349786,32.5602712117229,35.1758961156798,38.6426823049468,39.7971249670482,28.6502353806218,34.6186918761712,23.6360296213306,26.8924916087186,31.5252586456824,22.9218406086556,32.9927019110782,17.0383934999664,13.5273092591146,9.85539261585705,5.16254326188832,2.03991400112325,2.15881276655127,5.19821133958135,4.03224198387602,5.61777680527007,14.4865774191349,11.4305842025262,16.606960001986,13.661811718338,12.8326477414318,5.09610479413291,28.4426681261332,3.24736561516821,3.80039798212648,5.56076889516262,7.07940054258172,12.9468941823586,10.6878340126674,12.1439728736295,8.22056791442781,10.1470818792666,8.59119051149949,11.7588707135705,10.5559936716927,14.8316980640624,8.96516012903452,7.96149496754887,16.1766849947409,12.367125033782,8.24287930329878,5.59175283654366,21.6657789788545,27.8564120061895,6.38642638021478,5.03223522924865,3.59941638596045,3.81210681219194,29.5087559627501,22.4175295381127,46.6177646338727,16.339486098074,19.4343747571051,32.8305110404105,39.1001443993296,18.3310854930569,11.4454412961286,6.82351447770922,11.3638602178696,14.8337304977482,12.4147136394075,16.7457780718975,19.4409215008072,19.5945117555824,17.4234659587396,24.3624483855295,13.4525752784288,11.2095356325078,19.4779262572854,17.7710635405588,12.2749610159442,11.3999372182495,15.6713474934975,15.8452245034116,15.9227413454795,3.51106593656617,3.08817488537658,5.39910648851626,10.5634143993106,8.91199027928165,9.18316513451176,9.2330446878232,10.6252685143598,10.3358965634543,8.37122201101468,13.1453966685813,7.94004328096752,10.6963902443762,7.38753588355929,8.83650024049827,9.21059920779594,9.66020507280623,9.66286215074677,14.5100064509248,42.705414137403,8.59088835757875,7.40461586657924,11.0909890278322,13.0052536241846,13.6599509001419,8.87407508342707,7.56085349072559,7.22857379227725,7.59246498471219,8.23494773620054,7.28872105520782,6.96347652144028,8.77338392036041,9.88701349519644,6.70027954611552,7.96565093017469,10.6214024533726,14.0525670509966,10.1436962105772,13.0336849821001,14.7403890247396,15.640287835541,14.9238227613247,12.1040321343274,9.10592621479974,10.9823475890402,5.92905254174298,8.00856507437251,9.43483176543374,10.1187950573184,9.12870546248263,10.3706178693539,8.91190481234969,10.0693648107784,5.5125977103512,5.49122826376163,12.9391385874619,5.58211421502755,5.30464044294753,5.30415643688935,4.30553792452589,4.82443521363367,12.1937105509959,11.5589761179996,11.5705133273838,13.9190970335654,11.7345124144251,10.2178817039508,11.6641384034147,16.1960927721973,16.7093252752562,13.9522754478728,19.4534817762134,12.9452018625433,10.7064688756855,10.8486793936134,16.5870412333199,10.3342079925555,10.3270497333998,10.2096596132751,48.9679299462765,76.8908664044853,12.9508606847574,13.8859009962405,16.7219356290616,16.0079885161622,16.5876016254255,18.8785350382516,15.1503098376028,19.2492040936406,16.1924280669958,15.7818163272108,15.4162233399144,19.6006003017302,11.639086987078,27.9562997757591,19.7093220817827,17.1568927891437,5.30980553359851,11.4106898992841,8.46505959501303,12.4479352638893,14.7650946440386,13.2197113615889,12.6629863652428,11.9966130727577,12.83390562185,11.6933600436252,12.6502330289999,9.28219889233682,7.83011093233712,15.8453762747553,16.0404767890616,13.7175702420219,14.896579625951,16.4099312193905,14.1512157717824,14.0053876592716,11.7335854031855,11.4389318266463,15.6575162619023,12.366468970611,13.2400829890643,14.1132244331885,12.2953514323231,9.84845398470368,8.45294426226567,67.4948099318255,7.17657699350981,15.8917888331681,11.4820606969221,14.3160027323565,15.4464477324758,17.8446975101088,8.66889992968662,7.55737842547753,10.5031980091362,2.86401185404534,13.91878371757,15.2489600345137,10.8005340821801,8.99079672862215,9.82631536857799,9.57536859332227,10.0010681427656,6.02038666563268,8.16574331738295,10.5627683224777,10.1464728963154,15.9982704267057,12.4093867842823,18.4728628926845,15.2408591703723,19.5989105569303,18.5424437060291,21.3535191144078,18.874681996628,14.0118790079084,12.0972602628303,12.9564559457553,9.73081033392788,9.55211901632893,10.133824192268,10.2045216530464,11.3248372225321,14.6638448414362,11.8151621739662,10.9043765943999,15.469981750965,16.2330158070313,17.2500448909362,17.8954025451013,15.5446279901487,6.57518112484113,2.88581739386284,1.79427713218951,2.18250001273302,7.72758376128762,12.9500908061316,9.52388446189778,7.28852488868824,14.5455910170255,18.6368108063632,22.5559365888517,17.7597609166213,21.6535009753046,11.6464028361009,12.8416962556249,14.8504950050997,16.2115633160719,10.8754178156209,12.4262474820437,16.2946135707157,22.7444177838588,17.2440941811676,17.7467903459855,20.5420899375423,20.0389424210515,13.3348036680969,17.512979865306,12.194929964489,15.1618327058278,18.7574681918777,14.1469756039557,15.91905626988,19.2075457214608,18.2070436589294,11.9073422820768,20.5115256922394,19.8696497077616,12.3625770240992,13.8366984926333,10.6289468239479,13.8431128804283,16.9289694862598,13.3718703301742,18.2572198005741,18.6152137361688,16.4635175585495,12.6273461490165,17.7903389138079,14.0285567914435,20.7611281717305,20.981454745995,16.7784727699573,18.7473577835019,17.9403148212461,24.2316260599808,17.5448706334056,15.9004579995741,13.7727599089567,12.1325280515734,10.434052602919
|short_description=p1@Pacs2
|short_description=p1@Pacs2
}}
}}

Latest revision as of 09:36, 26 September 2015

Short description:p1@Pacs2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pacs2_5end
Coexpression cluster:MCL_coexpression_mm9:1322
Association with transcript: -37bp_to_ENSMUST00000084891, NM_001081170, uc007pfp.1, uc007pfq.1, uc007pfr.1_5end
EntrezGene:Pacs2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pacs2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.01
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.53
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.46
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.86
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A128.90
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.81
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.48
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C340.67
Mouse Granule cells, donor2.CNhs12357.11731-123E339.15
Mouse Granule cells, donor3.CNhs12108.11636-122C737.40
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.96
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C720.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.87
Mouse Microglia, donor1.CNhs12629.11718-123C819.77
Mouse Microglia, donor2.CNhs12634.11736-123E822.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D540.34
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F542.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D937.23
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F140.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D240.05
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F238.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D636.77
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D338.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D438.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F439.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.62
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.53
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E132.99
Mouse Schwann, donor1.CNhs12507.11728-123D917.04
Mouse Schwann, donor2.CNhs12573.11746-123F913.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.86
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I714.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.08
accessory axillary lymph node, adult.CNhs10475.1063-29H912.95
adrenal gland, adult.CNhs10508.49-24D710.69
adrenal gland, embryo E14.CNhs11038.406-44C512.14
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F58.59
adrenal gland, neonate N00.CNhs11191.1311-23C111.76
adrenal gland, neonate N25.CNhs11223.1377-27I310.56
amnion, adult pregnant day17.5.CNhs10488.583-22A814.83
aorta, adult.CNhs10498.46-23H18.97
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F516.18
bone (os femoris), neonate N16.CNhs11225.1525-43A612.37
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I227.86
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A429.51
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F146.62
cortex, adult.CNhs10473.12-14D516.34
cortex, neonate N30.CNhs11107.1392-42F219.43
diencephalon, adult.CNhs10482.20-12F232.83
diencephalon, neonate N30.CNhs11201.1388-42B239.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.33
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.45
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G411.36
eyeball, embryo E12.CNhs11016.345-16C614.83
eyeball, embryo E14.CNhs10521.399-16E212.41
eyeball, embryo E15.CNhs10593.426-16C916.75
eyeball, embryo E17.CNhs11023.1261-18D419.44
eyeball, neonate N00.CNhs11207.633-15C619.59
eyeball, neonate N01.CNhs11140.1532-43E717.42
eyeball, neonate N02.CNhs11205.1551-44G824.36
eyeball, neonate N16.CNhs11188.777-19A213.45
forelimb, embryo E11.CNhs10596.335-25E211.21
forelimb, embryo E12.CNhs10600.359-14H219.48
forelimb, embryo E13.CNhs10589.384-1E217.77
forelimb, embryo E14.CNhs10577.413-26A812.27
forelimb, embryo E15.CNhs11007.437-20E711.40
forelimb, embryo E17.CNhs10598.1517-43C415.67
forelimb, embryo E18.CNhs11008.1520-43B515.85
gonad, embryo E13.CNhs11044.1564-45I615.92
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E910.56
heart, embryo E12.CNhs11015.353-12F58.91
heart, embryo E13.CNhs11013.376-3I99.18
heart, embryo E14.CNhs10597.403-26D49.23
heart, embryo E15.CNhs11017.431-16C810.63
heart, embryo E16.CNhs11021.457-17C610.34
heart, embryo E17.CNhs11025.479-18E58.37
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E37.94
heart, neonate N03.CNhs11221.1349-25I210.70
heart, neonate N10.CNhs11118.749-24G17.39
heart, neonate N16.CNhs11209.782-15G18.84
heart, neonate N20.CNhs11127.821-26I69.21
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D29.66
hippocampus, adult.CNhs10478.13-16E814.51
hippocampus, neonate N00.CNhs11228.627-43G142.71
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I511.09
intestine, embryo E13.CNhs11010.381-16D513.01
intestine, embryo E15.CNhs10602.976-16D813.66
intestine, embryo E16.CNhs10585.463-22H48.87
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F77.23
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E98.23
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G17.97
kidney, embryo E14.CNhs10606.411-4I910.62
kidney, embryo E15.CNhs10997.434-16F814.05
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I213.03
kidney, embryo E18.CNhs11001.1288-20C714.74
kidney, neonate N00.CNhs11214.646-21G715.64
kidney, neonate N10.CNhs11206.758-6D514.92
kidney, neonate N20.CNhs11113.832-19I112.10
kidney, neonate N25.CNhs11122.1353-25F39.11
kidney, neonate N30.CNhs11203.1385-42H110.98
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F88.01
liver, embryo E13.CNhs10524.378-3H69.43
liver, embryo E14.CNhs10594.409-16E110.12
liver, embryo E15.CNhs10520.433-16D79.13
liver, embryo E16.CNhs10523.462-17F510.37
liver, embryo E17.CNhs10510.481-18A38.91
liver, embryo E18.CNhs10579.499-43G410.07
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B112.19
lung, embryo E12.CNhs10522.354-16G211.56
lung, embryo E14.CNhs10604.404-26F811.57
lung, embryo E15.CNhs11020.432-17C513.92
lung, embryo E16.CNhs10998.458-17B611.73
lung, embryo E17.CNhs10605.480-44A610.22
lung, embryo E18.CNhs10583.1287-20I611.66
lung, neonate N00.CNhs11224.640-42C616.20
lung, neonate N06.CNhs11212.683-20E516.71
lung, neonate N07.CNhs11111.715-19A313.95
lung, neonate N10.CNhs11219.750-23E619.45
lung, neonate N20.CNhs11109.822-18A412.95
lung, neonate N25.CNhs11119.1359-25C710.71
lung, neonate N30.CNhs11133.1394-42H210.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.33
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C248.97
medulla oblongata, neonate N30.CNhs11200.1396-42A376.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.89
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.88
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.15
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.19
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.42
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I711.64
ovary, embryo E18.CNhs11040.505-44H727.96
ovary, neonate N00.CNhs11217.1299-22I419.71
oviduct, adult pregnant day01.CNhs10500.988-6G617.16
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E512.45
pancreas, embryo E17.CNhs10599.1558-45G314.77
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G912.66
pancreas, neonate N01.CNhs11138.1531-43D712.00
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E615.85
pituitary gland, embryo E13.CNhs11009.370-44C716.04
pituitary gland, embryo E14.CNhs11037.398-44A513.72
pituitary gland, embryo E15.CNhs10592.427-16B914.90
pituitary gland, embryo E16.CNhs11036.449-43F616.41
pituitary gland, embryo E17.CNhs11039.1265-44F514.15
pituitary gland, neonate N00.CNhs11190.1308-22E914.01
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G311.44
prostate, adult.CNhs10470.859-1F815.66
skin, adult.CNhs10492.30-1C312.37
skin, neonate N00.CNhs11124.650-25G413.24
skin, neonate N03.CNhs11215.662-22H314.11
skin, neonate N06.CNhs11097.693-20I512.30
skin, neonate N10.CNhs11108.762-6C49.85
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C967.49
spleen, adult.CNhs10465.25-2G27.18
spleen, embryo E16.CNhs11035.461-43C115.89
spleen, embryo E18.CNhs11011.1271-21F211.48
spleen, neonate N10.CNhs11116.752-24D114.32
spleen, neonate N20.CNhs11112.824-19H115.45
spleen, neonate N25.CNhs11099.1354-25G317.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.50
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E313.92
stomach, embryo E15.CNhs10603.1252-16G815.25
stomach, embryo E16.CNhs11022.459-17D410.80
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C69.83
stomach, neonate N03.CNhs11193.1340-24B89.58
stomach, neonate N07.CNhs11210.718-18A910.00
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F516.00
testis, embryo E15.CNhs11034.443-27C512.41
testis, embryo E16.CNhs11033.470-26G518.47
testis, embryo E17.CNhs11029.486-18I515.24
testis, embryo E18.CNhs11027.503-18G519.60
testis, neonate N00.CNhs11189.1300-22B718.54
testis, neonate N07.CNhs11222.726-26I421.35
testis, neonate N10.CNhs11204.763-44D918.87
testis, neonate N20.CNhs11110.839-18H314.01
testis, neonate N30.CNhs11130.1391-42E212.10
thymus, adult.CNhs10471.38-12B512.96
thymus, embryo E14.CNhs11041.402-44I49.73
thymus, embryo E15.CNhs11005.430-45I29.55
thymus, embryo E16.CNhs11002.456-26C510.13
thymus, embryo E17.CNhs10581.478-18C110.20
thymus, embryo E18.CNhs10595.1273-19G411.32
thymus, neonate N02.CNhs11181.1541-43F814.66
thymus, neonate N03.CNhs11137.2104-43C711.82
thymus, neonate N06.CNhs11197.681-26C410.90
thymus, neonate N07.CNhs11211.713-19D315.47
thymus, neonate N10.CNhs11194.748-24E416.23
thymus, neonate N20.CNhs11186.820-7A217.25
thymus, neonate N25.CNhs11125.1362-25G717.90
thymus, neonate N30.CNhs11132.1393-42G215.54
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F512.95
uterus, adult.CNhs10509.92-27E59.52
vagina, adult.CNhs10502.89-27D57.29
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I816.29
whole body, embryo E12.CNhs10587.857-27C922.74
whole body, embryo E13.CNhs10512.372-23H217.24
whole body, embryo E14.5.CNhs10578.420-27D217.75
whole body, embryo E14.CNhs10519.395-14B120.54
whole body, embryo E16.CNhs10514.453-14F220.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.75
whole body, embryo E17.5.CNhs10513.490-9F917.94
whole body, embryo E17.CNhs10517.475-3I524.23
whole body, embryo E18.CNhs10516.493-3B317.54
whole body, neonate N00.CNhs10525.657-19C215.90
whole body, neonate N01.CNhs10576.659-23C613.77
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B410.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.86e-1523
neuroblast (sensu Vertebrata)5.86e-1523
neuron7.19e-1533
neuronal stem cell7.19e-1533
neuroblast7.19e-1533
electrically signaling cell7.19e-1533
neural cell6.02e-1343
ectodermal cell7.31e-1344
neurectodermal cell7.31e-1344
electrically responsive cell7.96e-1339
electrically active cell7.96e-1339

Uber anatomy
Ontology termp-valuen
nervous system1.25e-2075
central nervous system2.02e-2073
ectoderm-derived structure1.75e-1995
ectoderm1.75e-1995
presumptive ectoderm1.75e-1995
neurectoderm5.87e-1764
neural plate5.87e-1764
presumptive neural plate5.87e-1764
regional part of nervous system2.94e-1654
neural tube3.58e-1552
neural rod3.58e-1552
future spinal cord3.58e-1552
neural keel3.58e-1552
ecto-epithelium8.65e-1573
brain3.09e-1247
future brain3.09e-1247
regional part of brain7.40e-1246
gray matter7.40e-1234
pre-chordal neural plate1.70e-1149
anterior neural tube2.22e-1040
regional part of forebrain6.98e-1039
forebrain6.98e-1039
future forebrain6.98e-1039
brain grey matter3.21e-0929
regional part of telencephalon3.21e-0929
telencephalon3.21e-0929
structure with developmental contribution from neural crest4.63e-0992
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