FFCP PHASE1:Mm9::chr16:91647305..91647351,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20658 | |EntrezGene=20658 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-399bp_to_ENSMUST00000117633_5end | |association_with_transcript=-399bp_to_ENSMUST00000117633_5end | ||
|cluster_id=chr16:91647305..91647351,+ | |||
|description=CAGE_peak_4_at_Son_5end | |description=CAGE_peak_4_at_Son_5end | ||
|id=chr16:91647305..91647351,+ | |id=chr16:91647305..91647351,+ | ||
|ontology_enrichment_celltype=CL:0000144!7.97e-15!121;CL:0000012!7.97e-15!121;CL:0000063!1.22e-14!66;CL:0002371!2.34e-13!118;CL:0000548!8.78e-12!115;CL:0000004!8.78e-12!115;CL:0000255!8.78e-12!115;CL:0000034!2.03e-11!97;CL:0000723!3.18e-11!91;CL:0000048!3.18e-11!91;CL:0000988!2.52e-10!32;CL:0002032!2.52e-10!32;CL:0000037!2.52e-10!32;CL:0000566!2.52e-10!32;CL:0000837!2.52e-10!32;CL:0002320!1.16e-09!46;CL:0000134!1.16e-09!46;CL:0000219!5.92e-09!54;CL:0002031!1.84e-07!25;CL:0000838!3.01e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.22e-13,46;CL:0000134,2.22e-13,46;CL:0000034,3.61e-13,97;CL:0000723,1.50e-12,91;CL:0000048,1.50e-12,91;CL:0000988,1.86e-12,32;CL:0002032,1.86e-12,32;CL:0000037,1.86e-12,32;CL:0000837,1.86e-12,32;CL:0000219,1.07e-11,54;CL:0002031,5.17e-09,25;CL:0000838,2.27e-08,12;CL:0000791,3.54e-08,9;CL:0000789,3.54e-08,9;CL:0002420,3.54e-08,9;CL:0002419,3.54e-08,9;CL:0000790,3.54e-08,9;CL:0000084,1.37e-07,11;CL:0000827,1.37e-07,11;CL:0000624,1.96e-07,8;CL:0000542,2.20e-07,13;CL:0000051,2.20e-07,13;CL:0002563,3.49e-07,9;CL:0002251,3.49e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.16e-09!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.22e-13,46;UBERON:0000485,8.83e-08,11;UBERON:0001242,1.16e-07,13;UBERON:0001262,1.16e-07,13;UBERON:0004786,1.16e-07,13;UBERON:0003350,3.49e-07,9;UBERON:0004808,3.49e-07,9;UBERON:0001277,3.49e-07,9;UBERON:0000344,6.83e-07,15;UBERON:0002390,8.01e-07,45;UBERON:0003061,8.01e-07,45;UBERON:0002193,9.95e-07,48;UBERON:0002405,9.95e-07,48 | |||
|phase1_expression=1.44133962394315,3.48975407639361,2.72999543633722,8.77146212789807,3.00537437967808,3.52546471014969,2.56973904655078,29.3109944212378,9.99599927276834,11.4691617897777,2.22583358693156,2.6324812468461,19.3456824822262,19.7570109466934,0.666219523631325,1.61980213911861,1.39912375625629,4.41647031501533,2.4680598049033,6.36584477697045,0.680346321208558,3.17731043842833,0.783599367416806,1.11994695955385,0.91763712426868,1.72269589234506,0.86152399231815,3.44753972297422,1.90023419456374,2.52030129759931,3.99114919179548,11.4305521222734,6.1506478758457,0,9.53210345179206,3.65716219788683,6.53341940039581,38.0863783970586,27.346737058333,18.8468547830567,62.3525377312875,30.0540013381716,17.9638830621527,0.629484089877886,1.11514624341466,0.917733760808408,0.782391344348039,1.30815093828268,0.219686182734472,1.1665793944457,0.979904951377538,2.87505128729943,11.4092172119261,14.5072428402269,7.73015738027667,0.257259436035947,1.14613375975503,1.03134418455488,0.606949382578793,1.05798195854407,2.53532561402472,1.0165335962074,1.77858959222228,3.1496490104849,4.94433181283487,0,0.898800331555214,1.15265491596466,0.518448061542388,1.08004750665353,0.630974884054146,0.285650984403804,0.662605622854841,0.734944795289724,0.670918297127655,0.919218786610021,1.10115880999389,0.766124028511126,0.46081959976873,0.263772575460388,0.457438218012048,0,0.558365998002762,1.68828783009504,0.763991238884051,0.589257170947335,0.284743361598206,0.745597783301202,0.530083353332288,0.377857800533928,15.6526823898906,3.44169550792555,0.679971333707751,0,0,0,0.983110940922263,1.53387290320252,2.33807404142582,1.7666978725517,1.97180787687353,1.28326477414318,0,0,1.29894624606728,2.28023878927589,2.02209778005913,0.45673551887624,1.03575153458869,0.593768556259299,1.56136794089522,0.608930956624282,0.691846491768175,1.05505848386836,0.352766121407114,0.376999773989026,0.247194967734374,0.722996784599558,1.76922110389975,0.970601099684455,0.662524555381181,0.484875253135222,0,0.292780797011547,0.83778682725382,1.53274233125155,9.34557971146178,22.1964010467561,7.24300294316469,0.599162557619291,1.37250180845588,0.502617408451458,0.521472960576829,0.255715457330331,0.41557608911912,0.973447578406546,0.81471491080253,0.373220911830279,0.758168275301024,0.420883711772948,0.780722657776222,1.14951052216736,1.0803727788321,1.20563854268572,0.680364991513279,0.640568601424249,0.655912071918102,0.776110112217047,0,0.378212160335639,1.58356011747554,0.657587197282725,0.834141747676794,1.0447564995665,0.205782136407943,1.19420560091096,6.31991868581911,8.23513302767089,5.68326998791185,0.207125772535502,0,0.540186184383045,0.473489471170421,0.393528463494808,0.462801338662135,0.232533944750408,0,0.116765342367169,0.329119699826961,0.656669856316381,0.243206428637567,0.877199924551994,0.439100230582101,0.268412837520744,0.210289948564127,0.617427674275707,0.660837565967596,0.264450566663544,0.639864751605702,1.39342003116263,0.38660238396628,0,0.444756087689741,0.760902504450237,1.42358718463353,0.823494773620054,1.00534083520108,0.397912944082302,0.38992817423824,0,0.432276099749388,0.398282546508734,0.948339504765408,0.456994050438915,0,1.22190796707189,0.581857461502877,0.771494018793504,0.442655759869801,0.295220295959204,0.31399745568275,0.370191491765402,0.889357881261447,0.83422552858047,0.196558995113203,0,0,0.482354319504834,0,0,0.648540907100142,0.274561413188081,1.43768206527355,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.739012760666419,0.947457058852424,0.162964976442026,0.509235257325564,1.40814148973101,1.00503754465089,0.952174563544055,0.390267295715598,1.26108115284953,0.664394068946325,1.11618338060241,0.655453258862952,1.03610989119537,1.3018415272336,0,1.08781136763742,0,0,0.481651769963376,0.35163505977661,0.655739781506702,0,3.15508219416257,2.73307121007647,1.07711698866399,1.19484398976276,2.67358408898873,2.26461224631066,0.809621403349789,1.75353514746787,1.58115111178609,0.963963949265421,0.141940085208269,0.534196811001766,0.325773918707152,0.824850614862677,1.32745138339963,0.728341908464944,1.209294227859,0.565815239267694,2.06711325016541,0,1.03371317267288,1.09060118843252,0.356497378384721,0,1.05418608574999,0,3.74483566329167,1.62054984628179,2.06973894052407,1.07168517515796,2.12808280370728,2.14042581122485,1.97458824722545,5.17590413494819,0.704015124191131,0.42366414172764,0.220528398054962,0.32977250588296,0.645857706783622,1.20625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0.556275906031529,0.854354403989263,1.857481811669,0.740778109478847,2.0720530270516,1.0935538217682,0.686334519619568,6.28920190977265,7.13752406850656,6.49539876880792,0,1.10717597753397,0.609958401380546,0.86404272657441,0,1.31017538247707,0,0.165306911450672,0.523511883968059,0.648074866458964,1.24267862617385,0.56369293868419,0.299033092087958,0.165458490457098,0.777804753376191,0.516639293910924,1.01373675294467,0.469428954583016,0.781226309063701,1.04859344425711,0.966336483304024,0,1.58005560314089,2.63542779877213,0.616265742988964,0.389762468933385,1.61124026100733,1.19208812868759,1.20195449519969,1.32920574457119,0.403865799792591,0.457240839929999,0.806609481094724,1.36441033035653,1.05833025804362,1.75315353272353,0.453460767230423,0.221985953374065,0.62799699626633,0.167884616364078,0.19318959403219,0.187682475451182,0.915758121336325,0.428736758158132,0,0.564751842617067,1.84130094602871,0.572895513439397,0.515559547031063,2.05524755931193,3.0215755895588,0,0.45032120322422,0,0,0.830298780673413,2.39414924040619,1.36586884603307,0.972426868273176,0.628839487883947,0.735374033800057,0.888986911206461,0.618105171716683,0.320919209591815,0.505394423527595,0.760437899670719,0.377252682772152,0.468207537349412,0.448176066834085,0.402048282689293,0.952587382566147,0.231768651889711,0,0.412085900803307,0.588795680537589,0,0.532427418478012,0.238436189947321,0.436039249896986,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0.271608227691724,1.68342681497322,0.474540072496697,0.492522411877817,0,0.619747364743864,0,1.24905288968973,0.467863216890817,0.429742108096597,0.191288332068843,0.882365676478062,0 | |phase1_expression=1.44133962394315,3.48975407639361,2.72999543633722,8.77146212789807,3.00537437967808,3.52546471014969,2.56973904655078,29.3109944212378,9.99599927276834,11.4691617897777,2.22583358693156,2.6324812468461,19.3456824822262,19.7570109466934,0.666219523631325,1.61980213911861,1.39912375625629,4.41647031501533,2.4680598049033,6.36584477697045,0.680346321208558,3.17731043842833,0.783599367416806,1.11994695955385,0.91763712426868,1.72269589234506,0.86152399231815,3.44753972297422,1.90023419456374,2.52030129759931,3.99114919179548,11.4305521222734,6.1506478758457,0,9.53210345179206,3.65716219788683,6.53341940039581,38.0863783970586,27.346737058333,18.8468547830567,62.3525377312875,30.0540013381716,17.9638830621527,0.629484089877886,1.11514624341466,0.917733760808408,0.782391344348039,1.30815093828268,0.219686182734472,1.1665793944457,0.979904951377538,2.87505128729943,11.4092172119261,14.5072428402269,7.73015738027667,0.257259436035947,1.14613375975503,1.03134418455488,0.606949382578793,1.05798195854407,2.53532561402472,1.0165335962074,1.77858959222228,3.1496490104849,4.94433181283487,0,0.898800331555214,1.15265491596466,0.518448061542388,1.08004750665353,0.630974884054146,0.285650984403804,0.662605622854841,0.734944795289724,0.670918297127655,0.919218786610021,1.10115880999389,0.766124028511126,0.46081959976873,0.263772575460388,0.457438218012048,0,0.558365998002762,1.68828783009504,0.763991238884051,0.589257170947335,0.284743361598206,0.745597783301202,0.530083353332288,0.377857800533928,15.6526823898906,3.44169550792555,0.679971333707751,0,0,0,0.983110940922263,1.53387290320252,2.33807404142582,1.7666978725517,1.97180787687353,1.28326477414318,0,0,1.29894624606728,2.28023878927589,2.02209778005913,0.45673551887624,1.03575153458869,0.593768556259299,1.56136794089522,0.608930956624282,0.691846491768175,1.05505848386836,0.352766121407114,0.376999773989026,0.247194967734374,0.722996784599558,1.76922110389975,0.970601099684455,0.662524555381181,0.484875253135222,0,0.292780797011547,0.83778682725382,1.53274233125155,9.34557971146178,22.1964010467561,7.24300294316469,0.599162557619291,1.37250180845588,0.502617408451458,0.521472960576829,0.255715457330331,0.41557608911912,0.973447578406546,0.81471491080253,0.373220911830279,0.758168275301024,0.420883711772948,0.780722657776222,1.14951052216736,1.0803727788321,1.20563854268572,0.680364991513279,0.640568601424249,0.655912071918102,0.776110112217047,0,0.378212160335639,1.58356011747554,0.657587197282725,0.834141747676794,1.0447564995665,0.205782136407943,1.19420560091096,6.31991868581911,8.23513302767089,5.68326998791185,0.207125772535502,0,0.540186184383045,0.473489471170421,0.393528463494808,0.462801338662135,0.232533944750408,0,0.116765342367169,0.329119699826961,0.656669856316381,0.243206428637567,0.877199924551994,0.439100230582101,0.268412837520744,0.210289948564127,0.617427674275707,0.660837565967596,0.264450566663544,0.639864751605702,1.39342003116263,0.38660238396628,0,0.444756087689741,0.760902504450237,1.42358718463353,0.823494773620054,1.00534083520108,0.397912944082302,0.38992817423824,0,0.432276099749388,0.398282546508734,0.948339504765408,0.456994050438915,0,1.22190796707189,0.581857461502877,0.771494018793504,0.442655759869801,0.295220295959204,0.31399745568275,0.370191491765402,0.889357881261447,0.83422552858047,0.196558995113203,0,0,0.482354319504834,0,0,0.648540907100142,0.274561413188081,1.43768206527355,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.739012760666419,0.947457058852424,0.162964976442026,0.509235257325564,1.40814148973101,1.00503754465089,0.952174563544055,0.390267295715598,1.26108115284953,0.664394068946325,1.11618338060241,0.655453258862952,1.03610989119537,1.3018415272336,0,1.08781136763742,0,0,0.481651769963376,0.35163505977661,0.655739781506702,0,3.15508219416257,2.73307121007647,1.07711698866399,1.19484398976276,2.67358408898873,2.26461224631066,0.809621403349789,1.75353514746787,1.58115111178609,0.963963949265421,0.141940085208269,0.534196811001766,0.325773918707152,0.824850614862677,1.32745138339963,0.728341908464944,1.209294227859,0.565815239267694,2.06711325016541,0,1.03371317267288,1.09060118843252,0.356497378384721,0,1.05418608574999,0,3.74483566329167,1.62054984628179,2.06973894052407,1.07168517515796,2.12808280370728,2.14042581122485,1.97458824722545,5.17590413494819,0.704015124191131,0.42366414172764,0.220528398054962,0.32977250588296,0.645857706783622,1.20625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0.556275906031529,0.854354403989263,1.857481811669,0.740778109478847,2.0720530270516,1.0935538217682,0.686334519619568,6.28920190977265,7.13752406850656,6.49539876880792,0,1.10717597753397,0.609958401380546,0.86404272657441,0,1.31017538247707,0,0.165306911450672,0.523511883968059,0.648074866458964,1.24267862617385,0.56369293868419,0.299033092087958,0.165458490457098,0.777804753376191,0.516639293910924,1.01373675294467,0.469428954583016,0.781226309063701,1.04859344425711,0.966336483304024,0,1.58005560314089,2.63542779877213,0.616265742988964,0.389762468933385,1.61124026100733,1.19208812868759,1.20195449519969,1.32920574457119,0.403865799792591,0.457240839929999,0.806609481094724,1.36441033035653,1.05833025804362,1.75315353272353,0.453460767230423,0.221985953374065,0.62799699626633,0.167884616364078,0.19318959403219,0.187682475451182,0.915758121336325,0.428736758158132,0,0.564751842617067,1.84130094602871,0.572895513439397,0.515559547031063,2.05524755931193,3.0215755895588,0,0.45032120322422,0,0,0.830298780673413,2.39414924040619,1.36586884603307,0.972426868273176,0.628839487883947,0.735374033800057,0.888986911206461,0.618105171716683,0.320919209591815,0.505394423527595,0.760437899670719,0.377252682772152,0.468207537349412,0.448176066834085,0.402048282689293,0.952587382566147,0.231768651889711,0,0.412085900803307,0.588795680537589,0,0.532427418478012,0.238436189947321,0.436039249896986,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0.271608227691724,1.68342681497322,0.474540072496697,0.492522411877817,0,0.619747364743864,0,1.24905288968973,0.467863216890817,0.429742108096597,0.191288332068843,0.882365676478062,0 | ||
|short_description=p4@Son | |short_description=p4@Son | ||
}} | }} |
Latest revision as of 20:39, 25 September 2015
Short description: | p4@Son |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Son_5end |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | -399bp_to_ENSMUST00000117633_5end |
EntrezGene: | Son |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.22e-13 | 46 |
mesenchymal cell | 2.22e-13 | 46 |
stem cell | 3.61e-13 | 97 |
somatic stem cell | 1.50e-12 | 91 |
multi fate stem cell | 1.50e-12 | 91 |
hematopoietic cell | 1.86e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.86e-12 | 32 |
hematopoietic stem cell | 1.86e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.86e-12 | 32 |
motile cell | 1.07e-11 | 54 |
hematopoietic lineage restricted progenitor cell | 5.17e-09 | 25 |
lymphoid lineage restricted progenitor cell | 2.27e-08 | 12 |
mature alpha-beta T cell | 3.54e-08 | 9 |
alpha-beta T cell | 3.54e-08 | 9 |
immature T cell | 3.54e-08 | 9 |
mature T cell | 3.54e-08 | 9 |
immature alpha-beta T cell | 3.54e-08 | 9 |
T cell | 1.37e-07 | 11 |
pro-T cell | 1.37e-07 | 11 |
CD4-positive, alpha-beta T cell | 1.96e-07 | 8 |
lymphocyte | 2.20e-07 | 13 |
common lymphoid progenitor | 2.20e-07 | 13 |
intestinal epithelial cell | 3.49e-07 | 9 |
epithelial cell of alimentary canal | 3.49e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.22e-13 | 46 |
simple columnar epithelium | 8.83e-08 | 11 |
intestinal mucosa | 1.16e-07 | 13 |
wall of intestine | 1.16e-07 | 13 |
gastrointestinal system mucosa | 1.16e-07 | 13 |
epithelium of mucosa | 3.49e-07 | 9 |
gastrointestinal system epithelium | 3.49e-07 | 9 |
intestinal epithelium | 3.49e-07 | 9 |
mucosa | 6.83e-07 | 15 |
hematopoietic system | 8.01e-07 | 45 |
blood island | 8.01e-07 | 45 |
hemolymphoid system | 9.95e-07 | 48 |
immune system | 9.95e-07 | 48 |