FFCP PHASE1:Hg19::chr11:121322394..121322417,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6653 | |EntrezGene=6653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11185 | |HGNC=11185 | ||
|TSSclassifier=strong | |||
|UniProt=Q92673 | |UniProt=Q92673 | ||
|association_with_transcript=-494bp_to_ENST00000260197,NM_003105_5end | |association_with_transcript=-494bp_to_ENST00000260197,NM_003105_5end | ||
|cluster_id=chr11:121322394..121322417,+ | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_12_at_SORL1_5end | |description=CAGE_peak_12_at_SORL1_5end | ||
|id=chr11:121322394..121322417,+ | |id=chr11:121322394..121322417,+ | ||
|ontology_enrichment_celltype=CL:0000838!8.75e-24!52;CL:0000542!4.16e-23!53;CL:0000051!4.16e-23!53;CL:0000791!2.34e-22!18;CL:0000789!2.34e-22!18;CL:0002420!2.34e-22!18;CL:0002419!2.34e-22!18;CL:0000790!2.34e-22!18;CL:0000084!2.53e-16!25;CL:0000827!2.53e-16!25;CL:0000625!1.26e-15!11;CL:0000738!3.34e-11!140;CL:0002087!4.36e-11!119;CL:0000624!4.75e-10!6;CL:0002031!4.62e-08!124 | |ontology_enrichment_celltype=CL:0000838!8.75e-24!52;CL:0000542!4.16e-23!53;CL:0000051!4.16e-23!53;CL:0000791!2.34e-22!18;CL:0000789!2.34e-22!18;CL:0002420!2.34e-22!18;CL:0002419!2.34e-22!18;CL:0000790!2.34e-22!18;CL:0000084!2.53e-16!25;CL:0000827!2.53e-16!25;CL:0000625!1.26e-15!11;CL:0000738!3.34e-11!140;CL:0002087!4.36e-11!119;CL:0000624!4.75e-10!6;CL:0002031!4.62e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.66e-46;18!CL:0000789;6.66e-46;18!CL:0002419;6.66e-46;18!CL:0000084;6.21e-36;25!CL:0000625;4.88e-29;11!CL:0000624;1.34e-21;6!CL:0000542;1.26e-13;53!CL:0000898;8.91e-12;3!CL:0000623;1.66e-10;3!CL:0000815;1.41e-08;2!CL:0000792;1.41e-08;2!CL:0002677;1.41e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.14e-46,18;CL:0000789,5.14e-46,18;CL:0002420,5.14e-46,18;CL:0002419,5.14e-46,18;CL:0000790,5.14e-46,18;CL:0000084,5.11e-36,25;CL:0000827,5.11e-36,25;CL:0000625,3.53e-29,11;CL:0000838,4.93e-26,52;CL:0000542,1.97e-25,53;CL:0000051,1.97e-25,53;CL:0000624,1.45e-21,6;CL:0002087,5.16e-13,115;CL:0000898,8.19e-12,3;CL:0000738,4.30e-11,136;CL:0000623,1.19e-10,3;CL:0000825,1.19e-10,3;CL:0002031,5.63e-10,120;CL:0000815,1.41e-08,2;CL:0000792,1.41e-08,2;CL:0002677,1.41e-08,2;CL:0000037,8.47e-08,168;CL:0000988,4.24e-07,177;CL:0002032,8.31e-07,161;CL:0000837,8.31e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;6.66e-46;18!CL:0000051;1.26e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.40e-08!15;UBERON:0000179!7.40e-08!15;UBERON:0000463!7.40e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.07e-09;15!UBERON:0000179;1.07e-09;15!UBERON:0000463;1.07e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.00e-09,15;UBERON:0000179,1.00e-09,15;UBERON:0000463,1.00e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.157421562627358,0.786728553697808,0.383829398097213,0,0,0,0,0.697204805222715,0,0,0.553995408531877,0.601633342410425,1.08505435357926,0.223915474239924,1.94336199611388,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,1.1384259382189,0.587237189370939,1.14681968437569,0,0,0,5.31116379307349,5.10913991573914,5.34563897398724,6.35308682484577,17.2738801315803,20.3582556465935,23.3792074089494,3.23090324967003,25.6307139503108,19.7165166179423,24.1015438750864,0.896639238079726,1.8208308658383,0.986627427622057,1.38175008892924,1.73881851441031,5.6348894001583,5.88589821797369,10.4535523804977,1.92625882585863,4.98186641682498,4.81078423675682,6.32549230048757,5.73417745783374,2.60433381542567,2.85135613334512,3.61380285786655,4.47953139040464,1.24930726552346,4.97232229292435,1.64225599384209,3.42731463482045,0.802320587350522,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,1.94064817373566,2.82354679815446,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,0.862856803274467,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.564862804660675,0,0,1.33029046061003,0.459446800413919,0.507447609232169,0,2.27858874869665,1.90585420366231,1.23408681925858,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0.251932747854276,0,0.492339221844278,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.973033209536731,15.2757536233406,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0.199679000498991,0,0,0,0,0,0.551482276150566,0.412079291905832,0.674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0,0,1.0063040627978,0.236417121897595,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,4.46549419630756,0,0.365377795142688,0,0,0,0,0,4.08340650250609,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0.183428598521679,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.135939465953663,0,0,2.00216523405724,2.19780659981439,0,0.560544326627578,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0.447421727191169,1.17780280338292,0,0,0,0,0,1.87151570769685,0,0,0.11294608203896,0,0.150962843566674,0.926089897295336,0.218559560503957,0.470317296361523,0.245148321753905,0,0.196308467114945,0,0,0,0.375935671919414,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.476128862927481,0.0645889098360061,0.248298857183432,0,0,0.202117188958219,0,0,1.14498490124799,0.215166616178029,0.332660356546013,0,0,0,1.25755282949222,0,0,0,0,0,0 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| ||
|short_description=p12@SORL1 | |short_description=p12@SORL1 | ||
}} | }} |
Latest revision as of 06:37, 16 September 2015
Short description: | p12@SORL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SORL1_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | -494bp_to_ENST00000260197, NM_003105_5end |
EntrezGene: | SORL1 |
HGNC: | 11185 |
UniProt: | Q92673 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.14e-46 | 18 |
alpha-beta T cell | 5.14e-46 | 18 |
immature T cell | 5.14e-46 | 18 |
mature T cell | 5.14e-46 | 18 |
immature alpha-beta T cell | 5.14e-46 | 18 |
T cell | 5.11e-36 | 25 |
pro-T cell | 5.11e-36 | 25 |
CD8-positive, alpha-beta T cell | 3.53e-29 | 11 |
lymphoid lineage restricted progenitor cell | 4.93e-26 | 52 |
lymphocyte | 1.97e-25 | 53 |
common lymphoid progenitor | 1.97e-25 | 53 |
CD4-positive, alpha-beta T cell | 1.45e-21 | 6 |
nongranular leukocyte | 5.16e-13 | 115 |
naive T cell | 8.19e-12 | 3 |
leukocyte | 4.30e-11 | 136 |
natural killer cell | 1.19e-10 | 3 |
pro-NK cell | 1.19e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 5.63e-10 | 120 |
regulatory T cell | 1.41e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.41e-08 | 2 |
naive regulatory T cell | 1.41e-08 | 2 |
hematopoietic stem cell | 8.47e-08 | 168 |
hematopoietic cell | 4.24e-07 | 177 |
hematopoietic oligopotent progenitor cell | 8.31e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.31e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.00e-09 | 15 |
haemolymphatic fluid | 1.00e-09 | 15 |
organism substance | 1.00e-09 | 15 |