FFCP PHASE1:Mm9::chr13:3893541..3893546,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1644 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:3893541..3893546,- | |||
|description=CAGE_peak_at_chr13:3893541..3893546,- | |description=CAGE_peak_at_chr13:3893541..3893546,- | ||
|id=chr13:3893541..3893546,- | |id=chr13:3893541..3893546,- | ||
|ontology_enrichment_celltype=CL:0000075!5.68e-08!7;CL:0000239!5.76e-07!6;CL:0000677!5.76e-07!6;CL:0000212!5.76e-07!6;CL:0000584!5.76e-07!6 | |ontology_enrichment_celltype=CL:0000075!5.68e-08!7;CL:0000239!5.76e-07!6;CL:0000677!5.76e-07!6;CL:0000212!5.76e-07!6;CL:0000584!5.76e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.27e-12,6;CL:0000677,2.27e-12,6;CL:0000584,2.27e-12,6;CL:0000682,1.07e-11,3;CL:0000075,1.08e-10,7;CL:0002563,1.90e-08,9;CL:0002251,1.90e-08,9;CL:0000066,5.62e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.92e-09!24;UBERON:0000344!1.58e-08!15;UBERON:0002048!2.25e-08!14;UBERON:0000117!2.25e-08!14;UBERON:0000171!2.25e-08!14;UBERON:0000170!2.25e-08!14;UBERON:0005597!2.25e-08!14;UBERON:0000118!2.25e-08!14;UBERON:0005153!6.86e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.19e-16,2;UBERON:0001961,1.19e-16,2;UBERON:0001744,1.19e-16,2;UBERON:0000344,3.89e-13,15;UBERON:0004923,1.31e-11,24;UBERON:0002465,1.97e-11,3;UBERON:0006834,9.82e-10,1;UBERON:0003199,4.39e-09,1;UBERON:0005795,4.42e-09,4;UBERON:0000995,4.42e-09,4;UBERON:0003350,1.90e-08,9;UBERON:0004808,1.90e-08,9;UBERON:0001277,1.90e-08,9;UBERON:0003975,1.94e-07,5;UBERON:0000485,5.21e-07,11 | |||
|phase1_expression=0,1.04692622291808,2.72999543633722,0.90739263392049,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.27993938234725,1.14704640533585,0.57423196411502,1.29228598847722,1.50829862880122,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0.29688427812965,0,0,0,0,0,0,0.741584903203122,3.47038456607788,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.945810864637146,0.44292937929755,0.637819074629948,0.327726629431476,0.518054945597687,0.867894351489069,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0.21183207086382,0,0,3.39075296061402,0,0,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,7.3196165425961,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.467863216890817,0.429742108096597,0.382576664137687,0,0 | |phase1_expression=0,1.04692622291808,2.72999543633722,0.90739263392049,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.27993938234725,1.14704640533585,0.57423196411502,1.29228598847722,1.50829862880122,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0.29688427812965,0,0,0,0,0,0,0.741584903203122,3.47038456607788,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.945810864637146,0.44292937929755,0.637819074629948,0.327726629431476,0.518054945597687,0.867894351489069,0,0,0,0.275936746304732,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0.21183207086382,0,0,3.39075296061402,0,0,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,7.3196165425961,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.467863216890817,0.429742108096597,0.382576664137687,0,0 | ||
|short_description=p@chr13:3893541..3893546,- | |short_description=p@chr13:3893541..3893546,- | ||
}} | }} |
Latest revision as of 23:13, 5 August 2015
Short description: | p@chr13:3893541..3893546, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:3893541..3893546, - |
Coexpression cluster: | MCL_coexpression_mm9:1644 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.27e-12 | 6 |
gut absorptive cell | 2.27e-12 | 6 |
enterocyte | 2.27e-12 | 6 |
M cell of gut | 1.07e-11 | 3 |
columnar/cuboidal epithelial cell | 1.08e-10 | 7 |
intestinal epithelial cell | 1.90e-08 | 9 |
epithelial cell of alimentary canal | 1.90e-08 | 9 |
epithelial cell | 5.62e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 1.19e-16 | 2 |
mucosa-associated lymphoid tissue | 1.19e-16 | 2 |
lymphoid tissue | 1.19e-16 | 2 |
mucosa | 3.89e-13 | 15 |
organ component layer | 1.31e-11 | 24 |
lymphoid system | 1.97e-11 | 3 |
uterus or analog | 9.82e-10 | 1 |
egg chamber | 4.39e-09 | 1 |
embryonic uterus | 4.42e-09 | 4 |
uterus | 4.42e-09 | 4 |
epithelium of mucosa | 1.90e-08 | 9 |
gastrointestinal system epithelium | 1.90e-08 | 9 |
intestinal epithelium | 1.90e-08 | 9 |
internal female genitalia | 1.94e-07 | 5 |
simple columnar epithelium | 5.21e-07 | 11 |