FFCP PHASE1:Hg19::chr11:2017214..2017227,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC106078_5end | |association_with_transcript=0bp_to_BC106078_5end | ||
|cluster_id=chr11:2017214..2017227,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_10_at_H19_5end | |description=CAGE_peak_10_at_H19_5end | ||
|id=chr11:2017214..2017227,- | |id=chr11:2017214..2017227,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.50e-18;19!CL:0002577;2.93e-07;3!CL:0002541;3.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.67e-18,19;CL:0002577,2.91e-07,3;CL:0002541,3.34e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.27e-12!14;UBERON:0000158!5.27e-12!14;UBERON:0001557!1.51e-11!19;UBERON:0001737!1.76e-10!9;UBERON:0000478!3.43e-10!24;UBERON:0004923!3.50e-10!57;UBERON:0003104!4.57e-10!238;UBERON:0009142!4.57e-10!238;UBERON:0003124!3.17e-09!7;UBERON:0000481!9.71e-08!347;UBERON:0003103!1.07e-07!69;UBERON:0002100!2.50e-07!216;UBERON:0000077!3.29e-07!130;UBERON:0002417!9.29e-07!61;UBERON:0000916!9.29e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.51e-18;24!UBERON:0001737;1.60e-16;9!UBERON:0001557;1.60e-16;9!UBERON:0001134;1.65e-15;16!UBERON:0002036;1.65e-15;16!UBERON:0005631;8.10e-13;10!UBERON:0000158;8.10e-13;10!UBERON:0003688;1.30e-09;6!UBERON:0002358;1.30e-09;6!UBERON:0003684;1.30e-09;6!UBERON:0001178;1.30e-09;6!UBERON:0001987;7.38e-09;4!UBERON:0000305;1.16e-07;7!UBERON:0003124;3.50e-07;3!UBERON:0000920;3.50e-07;3!UBERON:0001723;9.69e-07;3!UBERON:0001033;9.69e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.46e-20,14;UBERON:0000158,8.46e-20,14;UBERON:0000478,3.57e-18,24;UBERON:0001737,1.73e-16,9;UBERON:0003124,2.18e-14,7;UBERON:0001557,2.15e-12,19;UBERON:0003688,1.57e-09,6;UBERON:0002358,1.57e-09,6;UBERON:0003684,1.57e-09,6;UBERON:0001178,1.57e-09,6;UBERON:0001987,7.47e-09,4;UBERON:0004340,7.47e-09,4;UBERON:0000305,1.17e-07,7;UBERON:0004923,3.17e-07,66;UBERON:0000920,3.34e-07,3;UBERON:0002100,6.69e-07,199;UBERON:0001723,9.52e-07,3;UBERON:0001033,9.52e-07,3;UBERON:0010056,9.52e-07,3 | |||
|phase1_expression=7.99384868790449,3.8538094300377,2.11431606143957,3.00219895059391,1.34088328328186,26.1701557230111,0,0,0,1.47440361900905,2.09340350391728,22.7179027015379,25.0578629317031,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70297735647684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.255725123687061,0,0,0,0,3.40644409211845,0,0,0,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,2.24271040056923,0,0,0,0.134710672069688,0.163461903113459,0.756787138224657,14.404398112,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,2.32387885739037,0.829288440122964,0.252320850875628,0,0,0,0,0,0,10.1743848034266,9.6093273344518,9.3994301654558,8.27204795492955,11.1118516487127,9.01628352622167,10.651673344653,10.0072947213927,8.0796902958742,0,2.80483547606892,2.8810180793198,20.5812195939759,0,0,2.95394953340702,0,0,0,0,0,0,3.88871469665824,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.857867961948885,130.229185293946,1.64648067356154,0,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,0,2.02693829334611,5.13690806375959,4.47652408099739,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.2269149171914,1.00034104211935,0.542530047399471,0,0,0,0.117141414992713,0,0,2.0694614258501,0,0.184369168541703,0,15.859893754482,29.1671910239228,0,0,0,55.1692180032192,251.317513660851,24.7960040530338,7.19512642674453,0.61384789315225,7.57782254969299,3.45975702990393,2.55853624533352,2.0911009748669,10.3892646511494,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,4.54933536283586,0,0,3.08454505380579,0,1.50506932156456,0,0,0,0,0,0,0,0.325378394664303,1.13345112812495,0,0,0,0,0,1.54673149267395,0.308097234229289,2.45605879561807,1.24052915236078,0.537101224341368,1.59518363305651,1.36362603865761,9.08126763596721,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.632758849437452,0.38126038784765,0.255897791311334,24.3925223179335,0,0,0,0,0,0,0,0,1.95053495635836,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0.982490410131212,0,0,0,0.329294892959902,0.75894634753143,2.0996083214699,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,108.628740555649,69.1927706340048,279.516238910301,0,0,0,0,0.844501632511974,0.19924798825107,0,3.02319297425131,0,0,0,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0.227586896570999,0,1.65471377237555,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0.23056390438806,15.7075877717101,7.71396340646257,73.0512655786096,10.9001136148216,304.36285710664,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,57.7855906055128,0,0,0.19566461893209,0,0.394584402849391,9.67925728389311,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,3.61569185248852,0,0,0,0.195551382734803,0,0.213452994739353,85.918132120316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,1.43574604915363,0.599037001496973,0.858452096273142,0,1.81395375714161,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.46872846777995,0,0,0,1.42939065274673,0.662091970365432,0.5085370753095,0,0,0,0,0,0.170388021785422,0,1.17241786942466,27.8264466715665,0,0,0,0,0,1.25763444079733,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.0024988196838,0.343395705182793,0.673498977531838,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,2.48830904013189,0,3.12691953050377,0,1.52893493468819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943757786781923,0.550285795565037,15.711490596446,0,0,0,0.451261970095544,0,0,18.8572820026624,0,0.591424344868181,0,0,0,0,0,0,4.96211178389294,0,0.383287282918786,0,0,0,0,8.07191568480013,0,1.20041606606193,0,0.0657727735628491,0,0,0.235479278551542,0,0,3.65263488203798,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,2.11693525095465,3.2074961596167,0,0,0,0,0,3.88457302312737,2.77189578511867,18.5570309014112,15.0570407848333,0,0,0,0,0,0,0,3.49695296806332,0,0.490296643507811,0,0,0,4.6492130034174,0,0.0939839179798536,0.902410431630081,0,1.07132363163395,0,0,0,0,0,0.315543124386369,0,0,10.580536810308,0.371995018166751,0.462175628631418,9.95041092884715,0,0.327796715891087,0.126698501011437,0,0,0.0918948995348449,0.250707539292375,0.530450887527676,0.267964130156178,0,0,4.26467963801962,7.14193294391221,0.0645889098360061,0.248298857183432,0,0.190941474834495,5.86139847978836,4.57205170583619,39.3568296248073,0.606168477131288,0.215166616178029,5.32256570473621,0.325613074443898,0,0,0,25.81050366438,0.122241444182866,1.22068853494722,0,0.201273793591026,0 | |phase1_expression=7.99384868790449,3.8538094300377,2.11431606143957,3.00219895059391,1.34088328328186,26.1701557230111,0,0,0,1.47440361900905,2.09340350391728,22.7179027015379,25.0578629317031,0.247532705920093,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70297735647684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.255725123687061,0,0,0,0,3.40644409211845,0,0,0,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,2.24271040056923,0,0,0,0.134710672069688,0.163461903113459,0.756787138224657,14.404398112,0.70296429550139,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,2.32387885739037,0.829288440122964,0.252320850875628,0,0,0,0,0,0,10.1743848034266,9.6093273344518,9.3994301654558,8.27204795492955,11.1118516487127,9.01628352622167,10.651673344653,10.0072947213927,8.0796902958742,0,2.80483547606892,2.8810180793198,20.5812195939759,0,0,2.95394953340702,0,0,0,0,0,0,3.88871469665824,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.857867961948885,130.229185293946,1.64648067356154,0,0.355391948742546,1.58390374586686,0,0,0,0,0,0,0,0,0,2.02693829334611,5.13690806375959,4.47652408099739,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.2269149171914,1.00034104211935,0.542530047399471,0,0,0,0.117141414992713,0,0,2.0694614258501,0,0.184369168541703,0,15.859893754482,29.1671910239228,0,0,0,55.1692180032192,251.317513660851,24.7960040530338,7.19512642674453,0.61384789315225,7.57782254969299,3.45975702990393,2.55853624533352,2.0911009748669,10.3892646511494,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,4.54933536283586,0,0,3.08454505380579,0,1.50506932156456,0,0,0,0,0,0,0,0.325378394664303,1.13345112812495,0,0,0,0,0,1.54673149267395,0.308097234229289,2.45605879561807,1.24052915236078,0.537101224341368,1.59518363305651,1.36362603865761,9.08126763596721,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.632758849437452,0.38126038784765,0.255897791311334,24.3925223179335,0,0,0,0,0,0,0,0,1.95053495635836,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0.982490410131212,0,0,0,0.329294892959902,0.75894634753143,2.0996083214699,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,108.628740555649,69.1927706340048,279.516238910301,0,0,0,0,0.844501632511974,0.19924798825107,0,3.02319297425131,0,0,0,0,0,0,1.08507746200627,0,0,0,0,0,0,0,0,0.227586896570999,0,1.65471377237555,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0.23056390438806,15.7075877717101,7.71396340646257,73.0512655786096,10.9001136148216,304.36285710664,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,57.7855906055128,0,0,0.19566461893209,0,0.394584402849391,9.67925728389311,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,3.61569185248852,0,0,0,0.195551382734803,0,0.213452994739353,85.918132120316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,1.43574604915363,0.599037001496973,0.858452096273142,0,1.81395375714161,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.46872846777995,0,0,0,1.42939065274673,0.662091970365432,0.5085370753095,0,0,0,0,0,0.170388021785422,0,1.17241786942466,27.8264466715665,0,0,0,0,0,1.25763444079733,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.0024988196838,0.343395705182793,0.673498977531838,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,2.48830904013189,0,3.12691953050377,0,1.52893493468819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943757786781923,0.550285795565037,15.711490596446,0,0,0,0.451261970095544,0,0,18.8572820026624,0,0.591424344868181,0,0,0,0,0,0,4.96211178389294,0,0.383287282918786,0,0,0,0,8.07191568480013,0,1.20041606606193,0,0.0657727735628491,0,0,0.235479278551542,0,0,3.65263488203798,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,2.11693525095465,3.2074961596167,0,0,0,0,0,3.88457302312737,2.77189578511867,18.5570309014112,15.0570407848333,0,0,0,0,0,0,0,3.49695296806332,0,0.490296643507811,0,0,0,4.6492130034174,0,0.0939839179798536,0.902410431630081,0,1.07132363163395,0,0,0,0,0,0.315543124386369,0,0,10.580536810308,0.371995018166751,0.462175628631418,9.95041092884715,0,0.327796715891087,0.126698501011437,0,0,0.0918948995348449,0.250707539292375,0.530450887527676,0.267964130156178,0,0,4.26467963801962,7.14193294391221,0.0645889098360061,0.248298857183432,0,0.190941474834495,5.86139847978836,4.57205170583619,39.3568296248073,0.606168477131288,0.215166616178029,5.32256570473621,0.325613074443898,0,0,0,25.81050366438,0.122241444182866,1.22068853494722,0,0.201273793591026,0 | ||
|short_description=p10@H19 | |short_description=p10@H19 | ||
}} | }} |
Latest revision as of 06:21, 17 September 2015
Short description: | p10@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 0bp_to_BC106078_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.67e-18 | 19 |
placental epithelial cell | 2.91e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.46e-20 | 14 |
membranous layer | 8.46e-20 | 14 |
extraembryonic structure | 3.57e-18 | 24 |
larynx | 1.73e-16 | 9 |
chorion | 2.18e-14 | 7 |
upper respiratory tract | 2.15e-12 | 19 |
omentum | 1.57e-09 | 6 |
peritoneum | 1.57e-09 | 6 |
abdominal cavity | 1.57e-09 | 6 |
visceral peritoneum | 1.57e-09 | 6 |
placenta | 7.47e-09 | 4 |
allantois | 7.47e-09 | 4 |
amnion | 1.17e-07 | 7 |
organ component layer | 3.17e-07 | 66 |
egg chorion | 3.34e-07 | 3 |
trunk | 6.69e-07 | 199 |
tongue | 9.52e-07 | 3 |
gustatory system | 9.52e-07 | 3 |
future tongue | 9.52e-07 | 3 |