FFCP PHASE1:Mm9::chr14:55304969..55305004,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56215 | |EntrezGene=56215 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=B8JJ89 | |UniProt=B8JJ89 | ||
|association_with_transcript=-72bp_to_ENSMUST00000125265_5end | |association_with_transcript=-72bp_to_ENSMUST00000125265_5end | ||
|cluster_id=chr14:55304969..55305004,- | |||
|description=CAGE_peak_4_at_Acin1_5end | |description=CAGE_peak_4_at_Acin1_5end | ||
|id=chr14:55304969..55305004,- | |id=chr14:55304969..55305004,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002027,2.03e-08,3;CL:0002006,2.03e-08,3;CL:0002024,2.03e-08,3;CL:0002031,6.67e-08,25;CL:0000084,2.20e-07,11;CL:0000827,2.20e-07,11;CL:0000988,5.50e-07,32;CL:0002032,5.50e-07,32;CL:0000037,5.50e-07,32;CL:0000837,5.50e-07,32;CL:0000791,9.40e-07,9;CL:0000789,9.40e-07,9;CL:0002420,9.40e-07,9;CL:0002419,9.40e-07,9;CL:0000790,9.40e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.25e-07,6;UBERON:0004457,3.25e-07,6;UBERON:0000042,3.25e-07,6;UBERON:0004854,3.25e-07,6;UBERON:0009034,3.25e-07,6;UBERON:0002095,3.25e-07,6;UBERON:0004782,3.25e-07,6;UBERON:0003281,3.25e-07,6;UBERON:0009664,3.25e-07,6;UBERON:0002296,3.25e-07,6;UBERON:0005602,3.25e-07,6;UBERON:0001179,3.25e-07,6;UBERON:0006293,3.25e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,1.42035655785734,0.281577444303333,0.234064526321993,0,0.159544317990673,3.0816131387617,2.88487327982691,2.33176833270964,3.84703008040669,3.49780939064073,0,0.411343300817216,0,16.4983982893075,0.198581902401771,1.04479915655574,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,1.57057123192139,0.588231488031014,0,0,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0,4.35217285206807,1.68046899571232,0,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0.210324961351382,0,0,0,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.274462930807229,0,0.558365998002762,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0.448026887097336,2.66844398250329,0,0,0.35333957451034,0,0,0,0,0,0,0,2.16949371466214,1.29468941823586,0.445326417194474,0,0,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0.884610551949874,0.647067399789637,1.54589062922275,1.45462575940567,0,0,0.209446706813455,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0.511430914660661,0.20778804455956,0,0,0.870848794270651,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0.776110112217047,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0.772043721344145,1.42081749697796,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0.630869845692382,0.617427674275707,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0.189709611372772,0,0.31399745568275,0,0.296452627087149,0.83422552858047,1.17935397067922,2.69834534861824,3.85434230638156,1.92941727801933,1.52775511068852,1.15078454980324,0.648540907100142,0.823684239564244,1.43768206527355,1.48856379067401,0,0,0.538192240565737,0.964887042726734,0.554259570499814,0.189491411770485,0,0,0,0,0.476087281772027,0,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0.983528546038072,0.827810238914197,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0,0,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0,0.214337035031592,2.12808280370728,1.07021290561242,0.493647061806363,0.608929898229199,0,0.21183207086382,0,0,0,0,0.238744688006273,0.164140899745061,0,0.18542530201051,2.39219233116994,0.206386867963223,0.925972636848558,3.95573759709851,4.37421528707281,2.74533807847827,0.339956859987711,0,0.690999869022119,0,0,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,77.2259325997341,0.149516546043979,0.330916980914195,0.583353565032143,0.645799117388655,0.675824501963113,0.821500670520278,0.39061315453185,1.57289016638566,69.8178109187158,60.7743313204096,0.632022241256357,0,0,0.129920822977795,0,0.39736270956253,0.120195449519969,0.443068581523732,0.201932899896295,0.533447646584999,0.504130925684203,0.292373642219257,0.384847366561318,0.818138315270983,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.643105137237198,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0.798049746802062,0.341467211508268,0,0.628839487883947,0.367687016900028,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.320125762024346,0.516919220600519,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.752875043322645,0.423073039458382,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.197008964751127,0,0.464810523557898,0.385813221962283,0.249810577937946,0,0.859484216193193,0.191288332068843,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,1.42035655785734,0.281577444303333,0.234064526321993,0,0.159544317990673,3.0816131387617,2.88487327982691,2.33176833270964,3.84703008040669,3.49780939064073,0,0.411343300817216,0,16.4983982893075,0.198581902401771,1.04479915655574,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,1.57057123192139,0.588231488031014,0,0,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0,4.35217285206807,1.68046899571232,0,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0.210324961351382,0,0,0,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.274462930807229,0,0.558365998002762,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0.448026887097336,2.66844398250329,0,0,0.35333957451034,0,0,0,0,0,0,0,2.16949371466214,1.29468941823586,0.445326417194474,0,0,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0.884610551949874,0.647067399789637,1.54589062922275,1.45462575940567,0,0,0.209446706813455,0,0.11981512450592,0,0.381210681219194,0,0,0,0,0.511430914660661,0.20778804455956,0,0,0.870848794270651,0.252722758433675,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0.776110112217047,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0.772043721344145,1.42081749697796,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.134206418760372,0.630869845692382,0.617427674275707,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0,0.189709611372772,0,0.31399745568275,0,0.296452627087149,0.83422552858047,1.17935397067922,2.69834534861824,3.85434230638156,1.92941727801933,1.52775511068852,1.15078454980324,0.648540907100142,0.823684239564244,1.43768206527355,1.48856379067401,0,0,0.538192240565737,0.964887042726734,0.554259570499814,0.189491411770485,0,0,0,0,0.476087281772027,0,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0.983528546038072,0.827810238914197,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0,0,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0,0.214337035031592,2.12808280370728,1.07021290561242,0.493647061806363,0.608929898229199,0,0.21183207086382,0,0,0,0,0.238744688006273,0.164140899745061,0,0.18542530201051,2.39219233116994,0.206386867963223,0.925972636848558,3.95573759709851,4.37421528707281,2.74533807847827,0.339956859987711,0,0.690999869022119,0,0,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,77.2259325997341,0.149516546043979,0.330916980914195,0.583353565032143,0.645799117388655,0.675824501963113,0.821500670520278,0.39061315453185,1.57289016638566,69.8178109187158,60.7743313204096,0.632022241256357,0,0,0.129920822977795,0,0.39736270956253,0.120195449519969,0.443068581523732,0.201932899896295,0.533447646584999,0.504130925684203,0.292373642219257,0.384847366561318,0.818138315270983,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.643105137237198,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0.798049746802062,0.341467211508268,0,0.628839487883947,0.367687016900028,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.320125762024346,0.516919220600519,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.752875043322645,0.423073039458382,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.197008964751127,0,0.464810523557898,0.385813221962283,0.249810577937946,0,0.859484216193193,0.191288332068843,0,0.463735671240843 | ||
|short_description=p4@Acin1 | |short_description=p4@Acin1 | ||
}} | }} |
Latest revision as of 02:31, 26 September 2015
Short description: | p4@Acin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Acin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -72bp_to_ENSMUST00000125265_5end |
EntrezGene: | Acin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 2.03e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.03e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.03e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 6.67e-08 | 25 |
T cell | 2.20e-07 | 11 |
pro-T cell | 2.20e-07 | 11 |
hematopoietic cell | 5.50e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.50e-07 | 32 |
hematopoietic stem cell | 5.50e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.50e-07 | 32 |
mature alpha-beta T cell | 9.40e-07 | 9 |
alpha-beta T cell | 9.40e-07 | 9 |
immature T cell | 9.40e-07 | 9 |
mature T cell | 9.40e-07 | 9 |
immature alpha-beta T cell | 9.40e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.25e-07 | 6 |
cavity lining | 3.25e-07 | 6 |
serous membrane | 3.25e-07 | 6 |
gastrointestinal system mesentery | 3.25e-07 | 6 |
stomach region | 3.25e-07 | 6 |
mesentery | 3.25e-07 | 6 |
gastrointestinal system serosa | 3.25e-07 | 6 |
mesentery of stomach | 3.25e-07 | 6 |
gut mesentery | 3.25e-07 | 6 |
dorsal mesentery | 3.25e-07 | 6 |
dorsal mesogastrium | 3.25e-07 | 6 |
peritoneal cavity | 3.25e-07 | 6 |
spleen primordium | 3.25e-07 | 6 |