FFCP PHASE1:Mm9::chr15:75840293..75840323,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=572 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TYL0 | |UniProt=Q3TYL0 | ||
|association_with_transcript=0bp_to_uc007wie.1_5end | |association_with_transcript=0bp_to_uc007wie.1_5end | ||
|cluster_id=chr15:75840293..75840323,+ | |||
|description=CAGE_peak_1_at_uc007wie.1_5end | |description=CAGE_peak_1_at_uc007wie.1_5end | ||
|id=chr15:75840293..75840323,+ | |id=chr15:75840293..75840323,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.41e-12!50;CL:0000221!3.16e-11!44;CL:0000133!3.16e-11!44;CL:0002319!4.57e-11!43;CL:0000393!5.16e-11!39;CL:0000211!5.16e-11!39;CL:0000540!1.16e-09!33;CL:0000047!1.16e-09!33;CL:0000031!1.16e-09!33;CL:0000404!1.16e-09!33;CL:0000117!1.17e-08!23;CL:0000337!1.17e-08!23 | |ontology_enrichment_celltype=CL:0000055!9.41e-12!50;CL:0000221!3.16e-11!44;CL:0000133!3.16e-11!44;CL:0002319!4.57e-11!43;CL:0000393!5.16e-11!39;CL:0000211!5.16e-11!39;CL:0000540!1.16e-09!33;CL:0000047!1.16e-09!33;CL:0000031!1.16e-09!33;CL:0000404!1.16e-09!33;CL:0000117!1.17e-08!23;CL:0000337!1.17e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.09e-11,43;CL:0000221,5.32e-11,44;CL:0000133,5.32e-11,44;CL:0000117,2.61e-10,23;CL:0000337,2.61e-10,23;CL:0000540,2.84e-09,33;CL:0000047,2.84e-09,33;CL:0000031,2.84e-09,33;CL:0000404,2.84e-09,33;CL:0000393,3.41e-09,39;CL:0000211,3.41e-09,39;CL:0002321,9.64e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.19e-18!102;UBERON:0000924!2.19e-18!102;UBERON:0006601!2.19e-18!102;UBERON:0001017!6.45e-18!73;UBERON:0005743!6.45e-18!73;UBERON:0000073!7.48e-18!75;UBERON:0001016!7.48e-18!75;UBERON:0002346!1.12e-16!71;UBERON:0003075!1.12e-16!71;UBERON:0007284!1.12e-16!71;UBERON:0000033!1.35e-16!63;UBERON:0001049!1.75e-13!52;UBERON:0005068!1.75e-13!52;UBERON:0006241!1.75e-13!52;UBERON:0007135!1.75e-13!52;UBERON:0003056!2.67e-13!49;UBERON:0000955!4.20e-13!50;UBERON:0006238!4.20e-13!50;UBERON:0002616!5.51e-13!49;UBERON:0003080!1.44e-09!40;UBERON:0002780!1.74e-09!39;UBERON:0001890!1.74e-09!39;UBERON:0006240!1.74e-09!39;UBERON:0007811!1.99e-08!86;UBERON:0002020!1.01e-07!34;UBERON:0000153!1.95e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.89e-17,73;UBERON:0004121,2.13e-17,95;UBERON:0000924,2.13e-17,95;UBERON:0006601,2.13e-17,95;UBERON:0002346,2.75e-17,64;UBERON:0003075,2.75e-17,64;UBERON:0007284,2.75e-17,64;UBERON:0001016,1.07e-16,75;UBERON:0000073,7.32e-16,54;UBERON:0003056,3.55e-15,49;UBERON:0010371,4.99e-15,73;UBERON:0001049,3.53e-14,52;UBERON:0005068,3.53e-14,52;UBERON:0006241,3.53e-14,52;UBERON:0007135,3.53e-14,52;UBERON:0002616,5.02e-13,46;UBERON:0000955,1.35e-12,47;UBERON:0006238,1.35e-12,47;UBERON:0010314,1.37e-12,92;UBERON:0002780,2.25e-11,39;UBERON:0001890,2.25e-11,39;UBERON:0006240,2.25e-11,39;UBERON:0003080,6.13e-11,40;UBERON:0002020,1.73e-08,34;UBERON:0003528,2.98e-08,29;UBERON:0002791,2.98e-08,29;UBERON:0001893,2.98e-08,29;UBERON:0002420,9.16e-08,8;UBERON:0007245,9.16e-08,8;UBERON:0010009,9.16e-08,8;UBERON:0010011,9.16e-08,8;UBERON:0000454,9.16e-08,8 | |||
|phase1_expression=1.28119077683835,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,5.69790044012167,0.198581902401771,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.881277725829041,0.811015449756117,0.734187008646726,1.56478268869608,1.09012578190223,1.97717564461025,1.36100929351998,0.55994568650145,0,0,0,0,0.257259436035947,1.14613375975503,1.54701627683233,0.809265843438391,2.11596391708813,2.53532561402472,0,0,0.449949858640699,0,0,0.299600110518405,3.07374644257244,0.518448061542388,1.21505344498522,0.420649922702764,0.856952953211411,0.883474163806454,0.122490799214954,0.575072826109418,2.75765635983006,2.20231761998777,1.40456071893706,1.0752457327937,1.18697658957174,1.09785172322892,1.56274011167028,1.3959149950069,1.68828783009504,1.83357897332172,1.47314292736834,0.427115042397309,1.1183966749518,0.227178579999552,0.755715601067855,0.289864488701678,0,0,0,0,0,0.702222100658759,1.02258193546835,0.519572009205738,0.35333957451034,0.704217098883403,0,5.09610479413291,14.2213340630666,0,0.253359865475099,0,0.79928715803342,0.517875767294343,1.48442139064825,0,0,0.922461989024234,0.60289056221049,0.470354828542819,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0.599162557619291,0,1.50785222535437,0.869121600961382,0.767146371990992,2.28566849015516,1.62241263067758,0.203678727700633,0.497627882440372,1.26361379216837,1.47309299120532,0.780722657776222,0.459804208866946,0.900310649026746,1.50704817835715,1.76894897793452,2.43416068541215,1.49922759295566,1.81092359517311,0.646703978798527,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0,0,0.393528463494808,0.308534225774757,0,0,0.350296027101508,0,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0.402619256281115,1.26173969138476,0.823236899034275,0,0.264450566663544,0.426576501070468,0.464473343720877,0.515469845288373,0,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0,0,0.432276099749388,0.199141273254367,0.379335801906163,0.342745537829186,0,0.203651327845314,0.581857461502877,0.420814919341911,1.01178459398812,1.47610147979602,1.255989822731,0.987177311374404,0.296452627087149,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0.549122826376163,0,0,0,0.252578877947112,0,0,0.923765950833023,0.568474235311454,0,0.509235257325564,0.469380496577004,1.00503754465089,0.714130922658041,0.780534591431195,0.472905432318573,1.10732344824387,0.637819074629948,0.81931657357869,0.690739927463582,0.723245292907558,0,0,0,0.275936746304732,0.481651769963376,1.17211686592203,0,0,0.631016438832513,0.780877488593277,0.215423397732799,0.238968797952552,1.11399337041197,2.26461224631066,0.404810701674894,0.584511715822624,0.790575555893047,0.642642632843614,1.84522110770749,0.35613120733451,0.325773918707152,1.15479086080775,0,0.728341908464944,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0.727067458955011,1.06949213515416,0.632073515871632,0,1.03135543248187,2.04263763452273,0.900305470156551,1.29358683782755,0.214337035031592,1.06404140185364,1.07021290561242,0.658196082408484,0.913394847343798,0,0.21183207086382,0.441056796109924,0.8244312647074,0,0.361877549568935,0.119372344003136,0.164140899745061,0,1.48340241608408,0.854354403989263,0.206386867963223,0.740778109478847,0.188368457004691,0.27338845544205,0.686334519619568,0.339956859987711,0.419854356970974,0,0,0.790839983952838,0.203319467126849,0.432021363287205,0,0.218362563746178,0,0.165306911450672,0,0.259229946583586,0,21.4203316699992,0.897099276263873,0.330916980914195,0.388902376688095,0.516639293910924,0.675824501963113,0.704143431874524,0.781226309063701,0.943734099831398,10.3881171955183,22.7543704943714,0.316011120628178,0,0.205421914329655,0.25984164595559,0.716106782669926,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.563047426353546,0.73260649706906,0.428736758158132,0,1.6942555278512,1.38097570952153,1.14579102687879,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,1.19707462020309,1.19513524027894,0.729320151204882,0.419226325255965,1.2869045591501,0.222246727801615,0.618105171716683,0,0.758091635291392,0.25347929989024,0.754505365544305,0.187283014939765,0.640251524048693,0.34461281373368,1.42888107384922,0.579421629724277,0.77163688185482,0,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0.263069711437843,0.135804113845862,0,0.711810108745045,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,1.24905288968973,0.467863216890817,0.214871054048298,0.382576664137687,0,0.231867835620421 | |phase1_expression=1.28119077683835,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,5.69790044012167,0.198581902401771,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.881277725829041,0.811015449756117,0.734187008646726,1.56478268869608,1.09012578190223,1.97717564461025,1.36100929351998,0.55994568650145,0,0,0,0,0.257259436035947,1.14613375975503,1.54701627683233,0.809265843438391,2.11596391708813,2.53532561402472,0,0,0.449949858640699,0,0,0.299600110518405,3.07374644257244,0.518448061542388,1.21505344498522,0.420649922702764,0.856952953211411,0.883474163806454,0.122490799214954,0.575072826109418,2.75765635983006,2.20231761998777,1.40456071893706,1.0752457327937,1.18697658957174,1.09785172322892,1.56274011167028,1.3959149950069,1.68828783009504,1.83357897332172,1.47314292736834,0.427115042397309,1.1183966749518,0.227178579999552,0.755715601067855,0.289864488701678,0,0,0,0,0,0.702222100658759,1.02258193546835,0.519572009205738,0.35333957451034,0.704217098883403,0,5.09610479413291,14.2213340630666,0,0.253359865475099,0,0.79928715803342,0.517875767294343,1.48442139064825,0,0,0.922461989024234,0.60289056221049,0.470354828542819,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0.599162557619291,0,1.50785222535437,0.869121600961382,0.767146371990992,2.28566849015516,1.62241263067758,0.203678727700633,0.497627882440372,1.26361379216837,1.47309299120532,0.780722657776222,0.459804208866946,0.900310649026746,1.50704817835715,1.76894897793452,2.43416068541215,1.49922759295566,1.81092359517311,0.646703978798527,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0,0,0.393528463494808,0.308534225774757,0,0,0.350296027101508,0,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0.402619256281115,1.26173969138476,0.823236899034275,0,0.264450566663544,0.426576501070468,0.464473343720877,0.515469845288373,0,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0,0,0.432276099749388,0.199141273254367,0.379335801906163,0.342745537829186,0,0.203651327845314,0.581857461502877,0.420814919341911,1.01178459398812,1.47610147979602,1.255989822731,0.987177311374404,0.296452627087149,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0.549122826376163,0,0,0,0.252578877947112,0,0,0.923765950833023,0.568474235311454,0,0.509235257325564,0.469380496577004,1.00503754465089,0.714130922658041,0.780534591431195,0.472905432318573,1.10732344824387,0.637819074629948,0.81931657357869,0.690739927463582,0.723245292907558,0,0,0,0.275936746304732,0.481651769963376,1.17211686592203,0,0,0.631016438832513,0.780877488593277,0.215423397732799,0.238968797952552,1.11399337041197,2.26461224631066,0.404810701674894,0.584511715822624,0.790575555893047,0.642642632843614,1.84522110770749,0.35613120733451,0.325773918707152,1.15479086080775,0,0.728341908464944,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0.727067458955011,1.06949213515416,0.632073515871632,0,1.03135543248187,2.04263763452273,0.900305470156551,1.29358683782755,0.214337035031592,1.06404140185364,1.07021290561242,0.658196082408484,0.913394847343798,0,0.21183207086382,0.441056796109924,0.8244312647074,0,0.361877549568935,0.119372344003136,0.164140899745061,0,1.48340241608408,0.854354403989263,0.206386867963223,0.740778109478847,0.188368457004691,0.27338845544205,0.686334519619568,0.339956859987711,0.419854356970974,0,0,0.790839983952838,0.203319467126849,0.432021363287205,0,0.218362563746178,0,0.165306911450672,0,0.259229946583586,0,21.4203316699992,0.897099276263873,0.330916980914195,0.388902376688095,0.516639293910924,0.675824501963113,0.704143431874524,0.781226309063701,0.943734099831398,10.3881171955183,22.7543704943714,0.316011120628178,0,0.205421914329655,0.25984164595559,0.716106782669926,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.563047426353546,0.73260649706906,0.428736758158132,0,1.6942555278512,1.38097570952153,1.14579102687879,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,1.19707462020309,1.19513524027894,0.729320151204882,0.419226325255965,1.2869045591501,0.222246727801615,0.618105171716683,0,0.758091635291392,0.25347929989024,0.754505365544305,0.187283014939765,0.640251524048693,0.34461281373368,1.42888107384922,0.579421629724277,0.77163688185482,0,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0.263069711437843,0.135804113845862,0,0.711810108745045,0.394017929502254,0.409231043169689,0.309873682371932,0.385813221962283,1.24905288968973,0.467863216890817,0.214871054048298,0.382576664137687,0,0.231867835620421 | ||
|short_description=p1@uc007wie.1 | |short_description=p1@uc007wie.1 | ||
}} | }} |
Latest revision as of 00:05, 27 September 2015
Short description: | p1@uc007wie.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007wie.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:572 |
Association with transcript: | 0bp_to_uc007wie.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.09e-11 | 43 |
ectodermal cell | 5.32e-11 | 44 |
neurectodermal cell | 5.32e-11 | 44 |
CNS neuron (sensu Vertebrata) | 2.61e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.61e-10 | 23 |
neuron | 2.84e-09 | 33 |
neuronal stem cell | 2.84e-09 | 33 |
neuroblast | 2.84e-09 | 33 |
electrically signaling cell | 2.84e-09 | 33 |
electrically responsive cell | 3.41e-09 | 39 |
electrically active cell | 3.41e-09 | 39 |
embryonic cell | 9.64e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.89e-17 | 73 |
ectoderm-derived structure | 2.13e-17 | 95 |
ectoderm | 2.13e-17 | 95 |
presumptive ectoderm | 2.13e-17 | 95 |
neurectoderm | 2.75e-17 | 64 |
neural plate | 2.75e-17 | 64 |
presumptive neural plate | 2.75e-17 | 64 |
nervous system | 1.07e-16 | 75 |
regional part of nervous system | 7.32e-16 | 54 |
pre-chordal neural plate | 3.55e-15 | 49 |
ecto-epithelium | 4.99e-15 | 73 |
neural tube | 3.53e-14 | 52 |
neural rod | 3.53e-14 | 52 |
future spinal cord | 3.53e-14 | 52 |
neural keel | 3.53e-14 | 52 |
regional part of brain | 5.02e-13 | 46 |
brain | 1.35e-12 | 47 |
future brain | 1.35e-12 | 47 |
structure with developmental contribution from neural crest | 1.37e-12 | 92 |
regional part of forebrain | 2.25e-11 | 39 |
forebrain | 2.25e-11 | 39 |
future forebrain | 2.25e-11 | 39 |
anterior neural tube | 6.13e-11 | 40 |
gray matter | 1.73e-08 | 34 |
brain grey matter | 2.98e-08 | 29 |
regional part of telencephalon | 2.98e-08 | 29 |
telencephalon | 2.98e-08 | 29 |
basal ganglion | 9.16e-08 | 8 |
nuclear complex of neuraxis | 9.16e-08 | 8 |
aggregate regional part of brain | 9.16e-08 | 8 |
collection of basal ganglia | 9.16e-08 | 8 |
cerebral subcortex | 9.16e-08 | 8 |