FFCP PHASE1:Mm9::chr1:138177122..138177139,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=186 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:138177122..138177139,- | |||
|description=CAGE_peak_at_chr1:138177122..138177139,- | |description=CAGE_peak_at_chr1:138177122..138177139,- | ||
|id=chr1:138177122..138177139,- | |id=chr1:138177122..138177139,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.56e-08,23;CL:0000337,8.56e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.26e-11!34;UBERON:0003056!4.62e-11!49;UBERON:0000033!8.25e-11!63;UBERON:0002346!1.93e-10!71;UBERON:0003075!1.93e-10!71;UBERON:0007284!1.93e-10!71;UBERON:0003080!5.73e-10!40;UBERON:0002791!6.57e-10!29;UBERON:0003528!6.57e-10!29;UBERON:0001893!6.57e-10!29;UBERON:0002780!6.72e-10!39;UBERON:0001890!6.72e-10!39;UBERON:0006240!6.72e-10!39;UBERON:0002616!7.86e-10!49;UBERON:0000955!9.52e-10!50;UBERON:0006238!9.52e-10!50;UBERON:0001049!4.36e-09!52;UBERON:0005068!4.36e-09!52;UBERON:0006241!4.36e-09!52;UBERON:0007135!4.36e-09!52;UBERON:0004121!1.52e-08!102;UBERON:0000924!1.52e-08!102;UBERON:0006601!1.52e-08!102;UBERON:0001017!1.75e-08!73;UBERON:0005743!1.75e-08!73;UBERON:0002021!2.91e-08!10;UBERON:0000411!2.91e-08!10;UBERON:0001950!2.91e-08!10;UBERON:0000073!5.61e-08!75;UBERON:0001016!5.61e-08!75;UBERON:0000956!1.06e-07!21;UBERON:0001869!1.06e-07!21;UBERON:0000203!1.06e-07!21;UBERON:0000025!5.55e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.28e-18,10;UBERON:0000411,5.28e-18,10;UBERON:0001950,5.28e-18,10;UBERON:0002020,3.77e-16,34;UBERON:0003528,6.50e-14,29;UBERON:0002791,6.50e-14,29;UBERON:0001893,6.50e-14,29;UBERON:0000073,4.80e-13,54;UBERON:0003056,9.72e-12,49;UBERON:0002619,1.23e-11,17;UBERON:0002346,1.18e-10,64;UBERON:0003075,1.18e-10,64;UBERON:0007284,1.18e-10,64;UBERON:0000956,1.23e-10,21;UBERON:0001869,1.23e-10,21;UBERON:0000203,1.23e-10,21;UBERON:0002780,2.04e-10,39;UBERON:0001890,2.04e-10,39;UBERON:0006240,2.04e-10,39;UBERON:0003080,4.90e-10,40;UBERON:0001049,9.88e-10,52;UBERON:0005068,9.88e-10,52;UBERON:0006241,9.88e-10,52;UBERON:0007135,9.88e-10,52;UBERON:0001017,1.22e-09,73;UBERON:0001016,3.35e-09,75;UBERON:0004121,8.02e-09,95;UBERON:0000924,8.02e-09,95;UBERON:0006601,8.02e-09,95;UBERON:0010371,1.56e-08,73;UBERON:0002616,4.13e-08,46;UBERON:0000955,7.70e-08,47;UBERON:0006238,7.70e-08,47 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.281577444303333,0.70219357896598,0,0.159544317990673,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0,0,0.388859798148567,0.139986421625363,0,0.167782606057736,0,1.00828139742739,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0,0,1.76272340924412,0.945041568321835,0.841299845405528,0.571301968807607,0.220868540951614,0.367472397644862,0.862609239164127,0,2.20231761998777,2.80912143787413,5.06901559745603,1.05509030184155,0.731901148819277,1.04182674111352,0,1.12552522006336,3.0559649555362,3.83017161115768,1.70846016958924,1.1183966749518,0.227178579999552,0,0,0,0,1.07940638327563,0.649776417447669,0,0,0.340860645156116,0,0.70667914902068,0.422530259330042,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0,0.776813650941515,0.593768556259299,0.346970653532272,0.913396434936424,0,0.753613202763113,1.05829836422134,0.376999773989026,0.247194967734374,0.289198713839823,0,0.323533699894818,0.441683036920787,0.969750506270444,0,0.585561594023094,0.41889341362691,0,0,0,0,0.449371918214468,0.915001205637253,1.63350657746724,0.521472960576829,1.02286182932132,0.83115217823824,0.811206315338788,0.305518091550949,0,0,0,0.910843100738926,0.229902104433473,0.360124259610698,1.50704817835715,1.36072998302656,1.40925092313335,0.187403449119458,1.29351685369508,0.431135985865684,0.189106080167819,0.527853372491847,0.219195732427575,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0.703578179943289,0.720248245844059,0,0.983821158737019,0.771335564436891,0,0,0.817357396570186,0.16455984991348,0.656669856316381,0.729619285912702,0,0.439100230582101,0.402619256281115,0.420579897128254,2.98423375899925,0,0.264450566663544,0.639864751605702,1.39342003116263,0,0,0,0,0,0.494096864172033,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0.864552199498777,0,0,0.342745537829186,0,1.22190796707189,0.969762435838129,0.911765658574141,0.379419222745544,0.885660887877613,0.941992367048249,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0,0,0,1.78348749452539,0,11.5014565221884,1.11642284300551,0.312037673114561,0.505157755894224,0.358794827043824,0.964887042726734,0.369506380333209,0,0.651859905768103,1.35796068620151,0.704070744865506,0,0,1.56106918286239,0.630540576424764,1.32878813789265,0.956728611944923,1.96635977658886,1.55416483679306,0.289298117163023,0,0,0,0,0.321101179975584,0,1.14754461763673,0.252470927204373,0.315508219416257,0,0.430846795465598,0.716906393857656,0.445597348164788,0,0.404810701674894,1.16902343164525,0,0.321321316421807,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0.354680467284547,1.42695054081656,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0,0.32977250588296,0.161464426695906,0,0.477489376012546,0,0.582961673259701,0,0,0.412773735926445,0.370389054739423,1.50694765603753,2.05041341581538,0.915112692826091,0,0.139951452323658,0,0,0,0,0.432021363287205,0.627264888043406,0.436725127492355,0.404593039154462,0.330613822901344,0.26175594198403,0.518459893167171,0.621339313086926,1.12738587736838,0,0,0,0,1.18269287843545,0.58678619322877,0.781226309063701,0.629156066554265,0.483168241652012,0.288030006257865,0,0,0.410843828659309,0.389762468933385,0,0,0,0,0.302899349844443,0,0.100826185136841,0.682205165178267,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.448569283047378,0.671538465456314,0,0.187682475451182,0,0.428736758158132,0,6.21227026878773,4.14292712856459,5.15605962095457,2.23409137046794,3.42541259885321,1.5107877947794,3.37511250115903,4.95353323546643,1.81256963593682,6.21312374102184,0.62272408550506,0,0.170733605754134,0.729320151204882,0.419226325255965,0,0.44449345560323,1.44224540067226,0,0.252697211763798,0.50695859978048,0.377252682772152,0.655490552289177,0.512201219238954,0.114870937911227,0,0.463537303779422,0,0.824171801606613,0.588795680537589,1.37147700954166,1.59728225543404,0.953744759789284,0.290692833264657,0.0941093804153306,0.761531471025089,0.73171189149109,1.05227884575137,0.543216455383447,1.68342681497322,0.474540072496697,1.18205378850676,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 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| ||
|short_description=p@chr1:138177122..138177139,- | |short_description=p@chr1:138177122..138177139,- | ||
}} | }} |
Latest revision as of 21:35, 4 August 2015
Short description: | p@chr1:138177122..138177139, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:138177122..138177139, - |
Coexpression cluster: | MCL_coexpression_mm9:186 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.56e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.56e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.28e-18 | 10 |
visual cortex | 5.28e-18 | 10 |
neocortex | 5.28e-18 | 10 |
gray matter | 3.77e-16 | 34 |
brain grey matter | 6.50e-14 | 29 |
regional part of telencephalon | 6.50e-14 | 29 |
telencephalon | 6.50e-14 | 29 |
regional part of nervous system | 4.80e-13 | 54 |
pre-chordal neural plate | 9.72e-12 | 49 |
regional part of cerebral cortex | 1.23e-11 | 17 |
neurectoderm | 1.18e-10 | 64 |
neural plate | 1.18e-10 | 64 |
presumptive neural plate | 1.18e-10 | 64 |
cerebral cortex | 1.23e-10 | 21 |
cerebral hemisphere | 1.23e-10 | 21 |
pallium | 1.23e-10 | 21 |
regional part of forebrain | 2.04e-10 | 39 |
forebrain | 2.04e-10 | 39 |
future forebrain | 2.04e-10 | 39 |
anterior neural tube | 4.90e-10 | 40 |
neural tube | 9.88e-10 | 52 |
neural rod | 9.88e-10 | 52 |
future spinal cord | 9.88e-10 | 52 |
neural keel | 9.88e-10 | 52 |
central nervous system | 1.22e-09 | 73 |
nervous system | 3.35e-09 | 75 |
ectoderm-derived structure | 8.02e-09 | 95 |
ectoderm | 8.02e-09 | 95 |
presumptive ectoderm | 8.02e-09 | 95 |
ecto-epithelium | 1.56e-08 | 73 |
regional part of brain | 4.13e-08 | 46 |
brain | 7.70e-08 | 47 |
future brain | 7.70e-08 | 47 |