FFCP PHASE1:Hg19::chr12:115758891..115758908,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:115758891..115758908,- | |||
|coexpression_cluster_id=C266 | |||
|description=CAGE_peak_at_chr12:115758891..115758908,- | |description=CAGE_peak_at_chr12:115758891..115758908,- | ||
|id=chr12:115758891..115758908,- | |id=chr12:115758891..115758908,- | ||
|ontology_enrichment_celltype=CL:0002274!7.03e-13!5;CL:0000457!7.03e-13!5;CL:0002191!7.03e-13!5;CL:0000097!7.03e-13!5;CL:0000831!7.03e-13!5;CL:0002028!7.03e-13!5;CL:0000163!1.24e-10!9 | |ontology_enrichment_celltype=CL:0002274!7.03e-13!5;CL:0000457!7.03e-13!5;CL:0002191!7.03e-13!5;CL:0000097!7.03e-13!5;CL:0000831!7.03e-13!5;CL:0002028!7.03e-13!5;CL:0000163!1.24e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;8.54e-21;5!CL:0002595;1.21e-20;5!CL:0000054;1.21e-13;2!CL:0000137;1.21e-13;2!CL:0000092;1.21e-13;2!CL:0000163;5.08e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.65e-21,5;CL:0002028,6.65e-21,5;CL:0002595,1.48e-20,5;CL:0000054,1.07e-13,2;CL:0000137,1.07e-13,2;CL:0000092,1.07e-13,2;CL:0000163,4.42e-12,9;CL:0000151,6.93e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.23e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0060085;7.62e-26;1!DOID:3165;7.62e-26;1!DOID:0060121;7.62e-26;1!DOID:2438;7.62e-26;1!DOID:4418;7.62e-26;1!DOID:200;1.21e-13;2!DOID:4305;1.21e-13;2!DOID:0060072;1.80e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,5.93e-26,1;DOID:3165,5.93e-26,1;DOID:0060121,5.93e-26,1;DOID:2438,5.93e-26,1;DOID:4418,5.93e-26,1;DOID:200,1.07e-13,2;DOID:4305,1.07e-13,2;DOID:0060072,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002118!6.12e-07!5;UBERON:0004532!6.12e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.21e-20;5!UBERON:0001533;1.21e-20;5!UBERON:0003513;4.69e-15;7!UBERON:0000014;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.48e-20,5;UBERON:0001533,1.48e-20,5;UBERON:0003513,5.41e-15,7;UBERON:0000014,1.69e-07,4 | |||
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| ||
|short_description=p@chr12:115758891..115758908,- | |short_description=p@chr12:115758891..115758908,- | ||
}} | }} |
Latest revision as of 05:21, 24 July 2015
Short description: | p@chr12:115758891..115758908, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:115758891..115758908, - |
Coexpression cluster: | C266_acute_chronic_leukemia_small_choriocarcinoma_hepatoma_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.65e-21 | 5 |
basophil mast progenitor cell | 6.65e-21 | 5 |
smooth muscle cell of the subclavian artery | 1.48e-20 | 5 |
bone matrix secreting cell | 1.07e-13 | 2 |
osteocyte | 1.07e-13 | 2 |
osteoclast | 1.07e-13 | 2 |
endocrine cell | 4.42e-12 | 9 |
secretory cell | 6.93e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.48e-20 | 5 |
subclavian artery | 1.48e-20 | 5 |
trunk blood vessel | 5.41e-15 | 7 |
zone of skin | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 5.93e-26 | 1 |
skin benign neoplasm | 5.93e-26 | 1 |
integumentary system benign neoplasm | 5.93e-26 | 1 |
dermis tumor | 5.93e-26 | 1 |
cutaneous fibrous histiocytoma | 5.93e-26 | 1 |
giant cell tumor | 1.07e-13 | 2 |
bone giant cell tumor | 1.07e-13 | 2 |
benign neoplasm | 1.69e-07 | 4 |