FFCP PHASE1:Hg19::chr12:123351948..123351980,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:123351948..123351980,- | |||
|description=CAGE_peak_at_chr12:123351948..123351980,- | |description=CAGE_peak_at_chr12:123351948..123351980,- | ||
|id=chr12:123351948..123351980,- | |id=chr12:123351948..123351980,- | ||
|ontology_enrichment_celltype=CL:0002057!7.56e-07!42 | |ontology_enrichment_celltype=CL:0002057!7.56e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.05e-17;5!CL:0002567;3.23e-11;3!CL:0000775;3.76e-11;3!CL:0000163;1.18e-09;9!CL:0000860;2.26e-09;33!CL:0002057;2.26e-09;33!CL:0000317;7.22e-08;2!CL:1000448;7.22e-08;2!CL:0002308;7.22e-08;2!CL:0002140;7.22e-08;2!CL:0000766;8.13e-08;69!CL:0000047;1.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.03e-17,5;CL:0002028,1.03e-17,5;CL:0000766,5.58e-12,72;CL:0000775,2.53e-11,3;CL:0002567,3.93e-11,3;CL:0000163,1.16e-09,9;CL:0000839,5.21e-09,66;CL:0000557,8.01e-09,67;CL:0000317,8.59e-08,2;CL:1000448,8.59e-08,2;CL:0002308,8.59e-08,2;CL:0002140,8.59e-08,2;CL:0000860,2.86e-07,42;CL:0002057,2.86e-07,42;CL:0000738,4.44e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.22e-08;2!UBERON:0007771;7.22e-08;2!UBERON:0003297;7.22e-08;2!UBERON:0001821;7.22e-08;2!UBERON:0003487;7.22e-08;2!UBERON:0001820;7.22e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,8.59e-08,2;UBERON:0007771,8.59e-08,2;UBERON:0003297,8.59e-08,2;UBERON:0001821,8.59e-08,2;UBERON:0003487,8.59e-08,2;UBERON:0001820,8.59e-08,2;UBERON:0005089,8.59e-08,2;UBERON:0005088,8.59e-08,2;UBERON:0002371,2.29e-07,76 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0.572471974262113,0,0.251085279189606,0.152826811495903,0.410502947249729,0.393553906568396,0.393364276848904,0,0.154816123316076,0.919421224478927,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0.647787332037959,0.515151135268373,0.872389432677388,1.13362783106643,0.485168122375632,0.464858073811369,1.23350366406548,1.54853185447552,0,0,0.709446689665756,0.689491361473237,0.645484683583826,4.06279459783025,1.31769637679823,3.0019676506363,0.224723484445085,2.75475503133812,2.56743221660875,3.83602275479425,0.329851300186716,0.398927315243264,0,0.580418477257168,0.56738522469114,1.86846674698672,0.251248665256743,1.5644487552606,0,0.605399502633369,0.736555271975129,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0.764546456250458,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.616804496998528,0.668745981562712,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0.328875809207352,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0.604820229674197,0.534880391567015,0.724122019413995,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0.327447688744282,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0.732186172644509,0,0.81014194788176,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0.624320153660641,0,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0,0.206651562351531,5.94001428641027,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0,0.309157587715317,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0.57978255948989,0.545492241181669,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,4.14404764057442,0,0,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0.738155454624648,2.80483547606892,0,2.94017422771084,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.503946384596579,0.141775097242386,0,0.290633938513962,0.766765358330422,4.43396914106349,2.3773077183571,2.69526550203004,5.18831832301061,3.91351543621778,0.063497894292169,3.4378958300245,2.34434894420094,3.4214489204541,0,0.600686115687835,0,0,1.30788020649984,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.224170287987055,0.394061520403854,0.862510299438069,1.28343036279748,4.8277978602268,1.30139853857622,0,0,0,1.49801404789436,17.9496875522415,5.8018171881045,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0,0.902838299183157,0,1.03473071292505,0,0,0.260650843404249,0,0,0.206768026122887,1.2942852049117,0.320182673410333,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.512556597022804,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0,0.483437798366489,2.40607764363942,2.67034867914099,0.114814448164607,0,0.524497659837696,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,1.00337954770971,0,4.15538004464362,0,0.219259876645935,0,0.256450125116389,0,0,0.309123034943167,0,0.082509499920588,2.29706215198469,2.60024098414608,0,0.96670718292122,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.445160178233687,1.4875642382488,0.768760269460425,0.127612712494584,1.11273558941105,1.85938219718914,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0.762520775695299,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.563391205064483,0.143411352204052,0,0.35667105148125,0,0.633322905892992,0.329294892959902,0.75894634753143,1.39973888097993,0.192444225451024,0.670302275535787,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0.320472213382419,0,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0.593929361665277,0,0,0.281338832821026,0.111308705022906,0,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,1.4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| ||
|short_description=p@chr12:123351948..123351980,- | |short_description=p@chr12:123351948..123351980,- | ||
}} | }} |
Latest revision as of 06:10, 24 July 2015
Short description: | p@chr12:123351948..123351980, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:123351948..123351980, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.03e-17 | 5 |
basophil mast progenitor cell | 1.03e-17 | 5 |
myeloid leukocyte | 5.58e-12 | 72 |
neutrophil | 2.53e-11 | 3 |
light melanocyte | 3.93e-11 | 3 |
endocrine cell | 1.16e-09 | 9 |
myeloid lineage restricted progenitor cell | 5.21e-09 | 66 |
granulocyte monocyte progenitor cell | 8.01e-09 | 67 |
sebum secreting cell | 8.59e-08 | 2 |
epithelial cell of sweat gland | 8.59e-08 | 2 |
epithelial cell of skin gland | 8.59e-08 | 2 |
acinar cell of sebaceous gland | 8.59e-08 | 2 |
classical monocyte | 2.86e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.86e-07 | 42 |
leukocyte | 4.44e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
skin gland | 8.59e-08 | 2 |
epidermis gland | 8.59e-08 | 2 |
gland of integumental system | 8.59e-08 | 2 |
sebaceous gland | 8.59e-08 | 2 |
skin sebaceous gland | 8.59e-08 | 2 |
sweat gland | 8.59e-08 | 2 |
sweat gland placode | 8.59e-08 | 2 |
sebaceous gland placode | 8.59e-08 | 2 |
bone marrow | 2.29e-07 | 76 |