FFCP PHASE1:Mm9::chr2:34817309..34817316,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22029 | |EntrezGene=22029 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=P39428,Q8C245 | |UniProt=P39428,Q8C245 | ||
|association_with_transcript=-17bp_to_ENSMUST00000113064,ENSMUST00000168557,NM_009421,uc008jjk.1,uc008jjl.1,uc008jjm.1_5end | |association_with_transcript=-17bp_to_ENSMUST00000113064,ENSMUST00000168557,NM_009421,uc008jjk.1,uc008jjl.1,uc008jjm.1_5end | ||
|cluster_id=chr2:34817309..34817316,- | |||
|description=CAGE_peak_12_at_Traf1_5end | |description=CAGE_peak_12_at_Traf1_5end | ||
|id=chr2:34817309..34817316,- | |id=chr2:34817309..34817316,- | ||
|ontology_enrichment_celltype=CL:0000791!1.41e-21!9;CL:0000789!1.41e-21!9;CL:0002420!1.41e-21!9;CL:0002419!1.41e-21!9;CL:0000790!1.41e-21!9;CL:0000624!2.43e-19!8;CL:0000084!2.68e-17!11;CL:0000827!2.68e-17!11;CL:0000738!7.98e-16!17;CL:0002087!7.98e-16!17;CL:0000838!1.08e-15!12;CL:0000893!1.10e-14!6;CL:0002489!1.10e-14!6;CL:0000898!1.10e-14!6;CL:0000809!1.10e-14!6;CL:0000810!1.10e-14!6;CL:0000895!1.10e-14!6;CL:0000808!1.10e-14!6;CL:0000894!1.10e-14!6;CL:0000806!1.10e-14!6;CL:0000807!1.10e-14!6;CL:0000805!1.10e-14!6;CL:0002425!1.10e-14!6;CL:0002436!1.10e-14!6;CL:0002427!1.10e-14!6;CL:0002428!1.10e-14!6;CL:0002429!1.10e-14!6;CL:0002433!1.10e-14!6;CL:0002431!1.10e-14!6;CL:0002432!1.10e-14!6;CL:0000542!2.45e-14!13;CL:0000051!2.45e-14!13;CL:0002031!9.92e-12!25;CL:0000988!4.37e-10!32;CL:0002032!4.37e-10!32;CL:0000037!4.37e-10!32;CL:0000566!4.37e-10!32;CL:0000837!4.37e-10!32;CL:0000219!7.04e-09!54;CL:0002320!3.27e-07!46;CL:0000134!3.27e-07!46;CL:0002453!4.23e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000815,1.39e-22,1;CL:0000792,1.39e-22,1;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0000893,1.13e-15,6;CL:0002489,1.13e-15,6;CL:0000898,1.13e-15,6;CL:0000809,1.13e-15,6;CL:0000810,1.13e-15,6;CL:0000895,1.13e-15,6;CL:0000808,1.13e-15,6;CL:0000894,1.13e-15,6;CL:0000806,1.13e-15,6;CL:0000807,1.13e-15,6;CL:0000805,1.13e-15,6;CL:0002425,1.13e-15,6;CL:0002436,1.13e-15,6;CL:0002427,1.13e-15,6;CL:0002428,1.13e-15,6;CL:0002429,1.13e-15,6;CL:0002433,1.13e-15,6;CL:0002431,1.13e-15,6;CL:0002432,1.13e-15,6;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.06e-13!23;UBERON:0000974!1.06e-13!23;UBERON:0004807!1.06e-13!23;UBERON:0005058!1.06e-13!23;UBERON:0003351!1.06e-13!23;UBERON:0009113!1.06e-13!23;UBERON:0003295!1.06e-13!23;UBERON:0009722!1.06e-13!23;UBERON:0005562!1.06e-13!23;UBERON:0007690!1.06e-13!23;UBERON:0006562!5.22e-13!24;UBERON:0003408!5.22e-13!24;UBERON:0001557!5.22e-13!24;UBERON:0001042!5.22e-13!24;UBERON:0008814!5.22e-13!24;UBERON:0009145!5.22e-13!24;UBERON:0004177!5.35e-12!29;UBERON:0000072!3.07e-11!27;UBERON:0000063!3.28e-11!35;UBERON:0002193!6.06e-11!48;UBERON:0002390!1.77e-10!45;UBERON:0003061!1.77e-10!45;UBERON:0002530!3.90e-08!65;UBERON:0000065!1.47e-07!41;UBERON:0001004!2.61e-07!42;UBERON:0002384!3.27e-07!46;UBERON:0002405!3.77e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.15e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,4.08287294239834,2.80877431586392,0.34243593645101,0.398860794976682,0.684802919724823,0.34968160967599,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0,0,0,2.17608642603403,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.679913719975421,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596044064343795,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.16210991097419,4.08287294239834,2.80877431586392,0.34243593645101,0.398860794976682,0.684802919724823,0.34968160967599,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0,0,0,2.17608642603403,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.679913719975421,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596044064343795,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@Traf1 | |short_description=p12@Traf1 | ||
}} | }} |
Latest revision as of 15:37, 26 September 2015
Short description: | p12@Traf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Traf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -17bp_to_ENSMUST00000113064, ENSMUST00000168557, NM_009421, uc008jjk.1, uc008jjl.1, uc008jjm.1_5end |
EntrezGene: | Traf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.15e-08 | 46 |